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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Genome Component Ontology Resource Report Resource Website 1+ mentions |
Genome Component Ontology (RRID:SCR_010330) | GCO | controlled vocabulary, data or information resource, ontology | Ontology to define the abstract division of the total genetic information of an organism by its physical separation into different components, thereby providing a high level reference point to which more specific descriptions of the characteristics of these components can be linked. | owl | is listed by: BioPortal | nlx_157418 | SCR_010330 | 2026-08-03 09:34:36 | 1 | |||||||||
|
Content Archive Resource Exchange Lexicon Resource Report Resource Website |
Content Archive Resource Exchange Lexicon (RRID:SCR_010298) | CARELEX | controlled vocabulary, data or information resource, ontology | Categories and terms used to classify content (documents, images, etc) in electronic content repositories for life science / BioPharma. Initial version contains content model for use with clinical trial electronic Trial Master Files or eTMF archives. A Content model contains content classification categories (classes) and metadata properties (data properties). Data properties should be assigned to each Content Type. Recent changes include: addition of electronic signature support, medical imaging classifications. | owl | is listed by: BioPortal | nlx_157377 | http://www.carelex.org | SCR_010298 | 2026-08-03 09:34:25 | 0 | ||||||||
|
Amphibian Gross Anatomy Ontology Resource Report Resource Website 1+ mentions |
Amphibian Gross Anatomy Ontology (RRID:SCR_010291) | AAO | controlled vocabulary, data or information resource, ontology | A structured controlled vocabulary of the anatomy of Amphibians. Note that AAO is currently being integrated into Uberon. | obo | is listed by: BioPortal | nlx_157316 | SCR_010291 | 2026-08-03 09:34:35 | 1 | |||||||||
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Disease core ontology applied to Rare Diseases Resource Report Resource Website |
Disease core ontology applied to Rare Diseases (RRID:SCR_010308) | HRDO | controlled vocabulary, data or information resource, ontology | A core ontology consistent with a metamodel (disorders and groups of disorders, genes, clinical signs and their relations) and an instantiation of this metamodel with Orphanet Data (available on http://orphadata.org). Research experiments demonstrated (i) efficient classifications generation based on SPARQL Construct, (ii) perspectives in semantic audit of a knowledge base, (iii) semantic comparison with OMIM (www.omim.org) using proximity measurements and (iv) opened perspectives in knowledge sharing (LORD, http://lord.bndmr.fr). Current production services of Orphanet developed ORDO, released in 2014, an ontology synchronized with their production database. | owl |
is listed by: BioPortal is related to: Orphanet |
INSERM | nlx_157388 | SCR_010308 | 2026-08-03 09:34:48 | 0 | ||||||||
|
Current Procedural Terminalogy Hierarchy Resource Report Resource Website |
Current Procedural Terminalogy Hierarchy (RRID:SCR_010300) | CPTH | controlled vocabulary, data or information resource, ontology | Metathesaurus of current procedural terminalogy (CPT). | umls | is listed by: BioPortal | nlx_157379 | SCR_010300 | 2026-08-03 09:34:35 | 0 | |||||||||
|
Dengue Fever Ontology Resource Report Resource Website |
Dengue Fever Ontology (RRID:SCR_010304) | IDODEN | controlled vocabulary, data or information resource, ontology | An ontology for dengue fever. | owl | is listed by: BioPortal | Dengue fever | nlx_157383 | http://code.google.com/p/dengue-fever-ontology/ | SCR_010304 | 2026-08-03 09:34:25 | 0 | |||||||
|
Dermatology Lexicon Resource Report Resource Website |
Dermatology Lexicon (RRID:SCR_010305) | DERMLEX | controlled vocabulary, data or information resource, ontology | A standardized terminology of dermatologic diagnoses, therapies, procedures, and laboratory tests. | owl | is listed by: BioPortal | nlx_157384 | SCR_010305 | 2026-08-03 09:34:48 | 0 | |||||||||
|
Diagnosis Ontology of Clinical Care Classification Resource Report Resource Website |
Diagnosis Ontology of Clinical Care Classification (RRID:SCR_010306) | DOCCC | controlled vocabulary, data or information resource, ontology | Diagnosis ontology of clinical care classification. | owl | is listed by: BioPortal | nlx_157385 | SCR_010306 | 2026-08-03 09:34:35 | 0 | |||||||||
|
Bionutrition Ontology Resource Report Resource Website 1+ mentions |
Bionutrition Ontology (RRID:SCR_010272) | BNO | controlled vocabulary, data or information resource, ontology | Ontology that relates concepts and terminologies used for human nutrition in a clinical and biomedical setting. | owl | is listed by: BioPortal | nlx_157337 | SCR_010272 | 2026-08-03 09:34:34 | 1 | |||||||||
|
BioTop Ontology Resource Report Resource Website 1+ mentions |
BioTop Ontology (RRID:SCR_010039) | BT | controlled vocabulary, data or information resource, ontology | A top-domain ontology that provides definitions for the foundational entities of biomedicine as a basic vocabulary to unambiguously describe facts in this domain. It can furthermore serve as top-level model for creating new ontologies for more specific domains or as aid for aligning or improving existing ones. | owl | is listed by: BioPortal | nlx_157329 | http://purl.org/biotop | SCR_010039 | 2026-08-03 09:34:45 | 1 | ||||||||
|
Eligibility Feature Hierarchy Resource Report Resource Website |
Eligibility Feature Hierarchy (RRID:SCR_010314) | ELIG | controlled vocabulary, data or information resource, ontology | A set of 1,437 eligibility features that were organized into a feature hierarchy using 80 breast cancer trials. | owl | is listed by: BioPortal | Breast cancer | nlx_157395 | SCR_010314 | 2026-08-03 09:34:48 | 0 | ||||||||
|
Enzyme Mechanism Ontology Resource Report Resource Website 1+ mentions |
Enzyme Mechanism Ontology (RRID:SCR_010315) | EMO | controlled vocabulary, data or information resource, ontology | Ontology to describe the active components of the enzyme''s reactions (cofactors, amino acid residues and cognate ligands) and their roles in the reaction. EMO builds upon this by formalizing key concepts, and the relationships between them, necessary to define enzymes and their functions. This describes not only the general features of an enzyme, including the EC number (catalytic activity), 3D structure and cellular locations, but also allows for the detailed annotation of the mechanism. This mechanistic detail can be either at a gross level (overall reaction only), or the more detailed granularity of the steps and components required to effect the overall chemical transformation. | owl | is listed by: BioPortal | nlx_157397 | SCR_010315 | 2026-08-03 09:34:36 | 1 | |||||||||
|
Enzyme Reaction Ontology for partial chemical perspectives Resource Report Resource Website 1+ mentions |
Enzyme Reaction Ontology for partial chemical perspectives (RRID:SCR_010316) | PIERO | controlled vocabulary, data or information resource, ontology | An enzyme ontology that deals with partial reactions (transformations) | owl | is listed by: BioPortal | nlx_157398 | SCR_010316 | 2026-08-03 09:34:26 | 1 | |||||||||
|
Epilepsy Ontology Resource Report Resource Website |
Epilepsy Ontology (RRID:SCR_010317) | EPILONT | controlled vocabulary, data or information resource, ontology | Ontology about the epilepsy domain and epileptic seizures. Based on the diagnosis proposed by the International League Against Epilepsy (ILAE). | owl | is listed by: BioPortal | nlx_157399 | SCR_010317 | 2026-08-03 09:34:48 | 0 | |||||||||
|
Loggerhead Nesting Ontology Resource Report Resource Website |
Loggerhead Nesting Ontology (RRID:SCR_010318) | LHN | controlled vocabulary, data or information resource, ontology | An ontology for Loggerhead sea turtle (Caretta caretta) nesting behavior, based on the published ethogram of Hailman and Elowson. A demonstration of ontology construction as a general technique for coding ethograms and other descriptions of behavior into machine understandable forms. | obo | is listed by: BioPortal | nlx_157459 | SCR_010318 | 2026-08-03 09:34:36 | 0 | |||||||||
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Fire Ontology Resource Report Resource Website |
Fire Ontology (RRID:SCR_010320) | FIRE | controlled vocabulary, data or information resource, ontology | Ontology to represent the set of concepts about the fire occurring in natural vegetation, its characteristics, causes and effects, with focus on Cerrado vegetation domain. The fire plays a determinant role on the structure and composition of Cerrado physiognomies. | owl | is listed by: BioPortal | nlx_157404 | SCR_010320 | 2026-08-03 09:34:48 | 0 | |||||||||
|
Flora Phenotype Ontology Resource Report Resource Website |
Flora Phenotype Ontology (RRID:SCR_010321) | FLOPO | controlled vocabulary, data or information resource, ontology | Ontology generated from the Flora Malesiana, Flora Gabon, Flora of Central Africa, and a collection of Kew''s African Floras. Every class in the ontology has at least one taxon annotation. This is the pre-classified version of the ontology; the original OWL file is at http://jagannath.pdn.cam.ac.uk/plant/flopo-unclassified.owl | owl | is listed by: BioPortal | nlx_157406 | http://wiki.pro-ibiosphere.eu/wiki/Traits_Task_Group | SCR_010321 | 2026-08-03 09:34:36 | 0 | ||||||||
|
NIF Subcellular Ontology Resource Report Resource Website |
NIF Subcellular Ontology (RRID:SCR_010366) | NIFSUBCELL | controlled vocabulary, data or information resource, ontology | Ontology that contains cell parts and subcellular structures from SAO-CORE and Gene Ontology Cellular Component (GO-CC). http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Subcellular.owl | owl |
is listed by: BioPortal has parent organization: Neuroscience Information Framework |
nlx_157494 | SCR_010366 | Neuroscience Information Framework Subcellular Ontology, Neuroscience Information Framework (NIF) Subcellular Ontology | 2026-08-03 09:34:38 | 0 | ||||||||
|
BioModels Ontology Resource Report Resource Website |
BioModels Ontology (RRID:SCR_010125) | BIOMODELS | controlled vocabulary, data or information resource, ontology | OWL Representation of the models in the BioModels repository. | owl | is listed by: BioPortal | nlx_157326 | https://code.google.com/p/sbmlharvester/ | SCR_010125 | 2026-08-03 09:34:46 | 0 | ||||||||
|
NMR-Instrument Component of Metabolomics Investigations Ontology Resource Report Resource Website 1+ mentions |
NMR-Instrument Component of Metabolomics Investigations Ontology (RRID:SCR_010367) | NMR | controlled vocabulary, data or information resource, ontology | Metabolomics Standards Initiative-sanctioned ontology, created within the COSMOS EU project, to support the nmrML data standard for nuclear magnetic resonance data in metabolomics with meaningful raw data descriptors. | owl, nuclear magnetic resonance, metabolomics |
is listed by: BioPortal is related to: Metabolomics Standards Initiative has parent organization: nmrCV |
nlx_157495 | SCR_010367 | 2026-08-03 09:34:27 | 1 |
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