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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Autism Spectrum Disorder Phenotype Ontology Resource Report Resource Website |
Autism Spectrum Disorder Phenotype Ontology (RRID:SCR_010006) | ASDPTO | controlled vocabulary, data or information resource, ontology | Ontology that encapsulates the Autism Spectrum Disorder behavioral phenotype, informed by the standard ASD assessment instruments and the currently known characteristics of this disorder. | owl, phenotype, behavior | is listed by: BioPortal | Autism Spectrum Disorder | PMID:24163114 | nlx_157322 | http://purl.bioontology.org/ontology/ASDPTO | SCR_010006 | 2026-08-03 09:34:43 | 0 | ||||||
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International Classification of Primary Care Resource Report Resource Website |
International Classification of Primary Care (RRID:SCR_010262) | ICPC | controlled vocabulary, data or information resource, ontology | Ontology of the international classification of primary care (ICPC). Denmark: World Organisation of Family Doctors, 1993. | umls | is listed by: BioPortal | nlx_157453 | SCR_010262 | 2026-08-03 09:34:25 | 0 | |||||||||
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Infectious Disease Ontology Resource Report Resource Website |
Infectious Disease Ontology (RRID:SCR_010345) | IDO | controlled vocabulary, data or information resource, ontology | Ontologies designed as a set of interoperable ontologies that will together provide coverage of the infectious disease domain. At the core of the set is a general Infectious Disease Ontology (IDO-Core) of entities relevant to both biomedical and clinical aspects of most infectious diseases. Sub-domain specific extensions of IDO-Core complete the set providing ontology coverage of entities relevant to specific pathogens or diseases. Please note: The ontology metrics displayed by BioPortal do not distinguish IDO-developed terms from terms imported from other ontologies. | owl | is listed by: BioPortal | Infectious disease | nlx_157439 | SCR_010345 | 2026-08-03 09:34:37 | 0 | ||||||||
|
International Classification of Diseases Version 9 - Clinical Modification Resource Report Resource Website |
International Classification of Diseases Version 9 - Clinical Modification (RRID:SCR_010104) | ICD9CM | controlled vocabulary, data or information resource, ontology | Ontology of the international standard diagnostic classification for all general epidemiological, many health management purposes and clinical use. | umls | is listed by: BioPortal | nlx_157451 | SCR_010104 | 2026-08-03 09:34:45 | 0 | |||||||||
|
International Classification of External Causes of Injuries Resource Report Resource Website 1+ mentions |
International Classification of External Causes of Injuries (RRID:SCR_010348) | ICECI | controlled vocabulary, data or information resource, ontology | A system of classifications to enable systematic description of how injuries occur. It is designed especially to assist injury prevention. It was originally designed for use in settings in which information is recorded in a way that allows statistical reporting--for example, injury surveillance based on collection of information about cases attending a sample of hospital emergency departments. It has also been found useful for other purposes. For example, it has been used as a reference classification during revision of another classification, to record risk-factor exposure of children in a cohort study, as the basis for special-purpose classifications and in a growing number of other ways. | owl | is listed by: BioPortal | nlx_157447 | SCR_010348 | 2026-08-03 09:34:37 | 1 | |||||||||
|
International Classification of Diseases Version 10 - Clinical Modification Resource Report Resource Website |
International Classification of Diseases Version 10 - Clinical Modification (RRID:SCR_010350) | ICD10CM | controlled vocabulary, data or information resource, ontology | Ontology of the International Classification of Diseases, 10th Edition, Clinical Modification, 2011_01 | umls | is listed by: BioPortal | nlx_157449 | SCR_010350 | 2026-08-03 09:34:48 | 0 | |||||||||
|
Maize Gross Anatomy Ontology Resource Report Resource Website |
Maize Gross Anatomy Ontology (RRID:SCR_010353) | ZEA | controlled vocabulary, data or information resource, ontology | THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 23, 2014. Description not available. | obo | is listed by: BioPortal | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_157462 | http://www.maizemap.org/ | SCR_010353 | 2026-08-03 09:34:48 | 0 | |||||||
|
Major Histocompatibility Complex Ontology Resource Report Resource Website |
Major Histocompatibility Complex Ontology (RRID:SCR_010354) | MHC | controlled vocabulary, data or information resource, ontology | Ontology that contains terms necessary for describing and categorizing concepts related to Major Histocompatibility Complex, in general, for a number of model species, and also for humans. | owl | is listed by: BioPortal | nlx_157463 | SCR_010354 | MaHCO, MaHCO - An MHC Ontology | 2026-08-03 09:34:37 | 0 | ||||||||
|
Biological Imaging Methods Ontology Resource Report Resource Website 1+ mentions |
Biological Imaging Methods Ontology (RRID:SCR_010235) | FBbi | controlled vocabulary, data or information resource, ontology | A structured controlled vocabulary of sample preparation, visualization and imaging methods used in biomedical research. | obo |
is listed by: BioPortal has parent organization: Cell Image Library (CIL) |
nlx_157334 | SCR_010235 | 2026-08-03 09:34:47 | 1 | |||||||||
|
International Classification of Functioning Disability and Health Resource Report Resource Website |
International Classification of Functioning Disability and Health (RRID:SCR_010239) | ICF | controlled vocabulary, data or information resource, ontology | A classification of health and health-related domains. These domains are classified from body, individual and societal perspectives by means of two lists: a list of body functions and structure, and a list of domains of activity and participation. Since an individual''s functioning and disability occurs in a context, the ICF also includes a list of environmental factors. | owl | is listed by: BioPortal | nlx_157452 | SCR_010239 | 2026-08-03 09:34:33 | 0 | |||||||||
|
Microbial Culture Collection Vocabulary Resource Report Resource Website |
Microbial Culture Collection Vocabulary (RRID:SCR_010361) | MCCV | controlled vocabulary, data or information resource, ontology | Structured controlled vocabulary for describing meta information of microbial calture collection maintained in biological research centers | owl | is listed by: BioPortal | nlx_157478 | SCR_010361 | 2026-08-03 09:34:27 | 0 | |||||||||
|
Minimal Information about any Sequence Ontology Resource Report Resource Website |
Minimal Information about any Sequence Ontology (RRID:SCR_010364) | MIXS | controlled vocabulary, data or information resource, ontology | Ontology providing an RDF representation of the MIxS (Minimal Information about any Sequence) family of checklists. | owl | is listed by: BioPortal | nlx_157482 | SCR_010364 | 2026-08-03 09:34:27 | 0 | |||||||||
|
NIF Dysfunction Ontlogy Resource Report Resource Website |
NIF Dysfunction Ontlogy (RRID:SCR_010365) | NIFDYS | controlled vocabulary, data or information resource, ontology | Ontology that contains the former BIRNLex-Disease, version 1.3.2. -- The BIRN Project lexicon provided entities for data and database annotation for the BIRN project, covering anatomy, disease, data collection, project management and experimental design. It was built using the organizational framework provided by the foundational Basic Formal Ontology (BFO). It used an abstract biomedical layer on top of that - OBO-UBO which was constructed as a proposal to the OBO Foundry. This was meant to support creating a sharable view of core biomedical objects such as biomaterial_entity, and organismal_entity that all biomedical ontologies are likely to need and want to use with the same intended meaning. The BIRNLex biomaterial entities have already been factored to separately maintained ontology - BIRNLexBiomaterialEntity.owl which this BIRNLex-Main.owl file imports. The Ontology of Biomedical Investigation (OBI) is also imported and forms the foundation for the formal description of all experiment-related artifacts. The BIRNLex will serve as the basis for construction of a formal ontology for the multiscale investigation of neurological disease. | owl |
is listed by: BioPortal has parent organization: Neuroscience Information Framework |
nlx_157493 | SCR_010365 | Neuroscience Information Framework (NIF) Dysfunction Ontlogy, Neuroscience Information Framework Dysfunction Ontlogy | 2026-08-03 09:34:49 | 0 | ||||||||
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Upper-Level Cancer Ontology Resource Report Resource Website |
Upper-Level Cancer Ontology (RRID:SCR_010443) | CANONT | controlled vocabulary, data or information resource, ontology | Upper-level ontology for cancer. | obo | is listed by: BioPortal | Cancer | nlx_157620 | SCR_010443 | 2026-08-03 09:34:50 | 0 | ||||||||
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Web-Service Interaction Ontology Resource Report Resource Website |
Web-Service Interaction Ontology (RRID:SCR_010448) | WSIO | controlled vocabulary, data or information resource, ontology | Ontology that enables automated interaction with more complex Web services that are typical for example within life sciences. WSIO is however independent of the application domain and relevant for both SOAP and REST Web services, and for batch execution engines in general. If the interaction scenario with a Web service is nontrivial (and incorporates session handling), annotation with WSIO concepts will enable automatic generation of client programs, scripts, or interactive applications with a graphical user interface. WSIO also enables automation of different ways of data transfer and data un-/compression or en-/decoding. They strongly discourage providers from developing complex interaction and data-transfer/compression scenarios, however when needed, WSIO may enable smooth automated interaction with them. Future versions will support more interaction scenarios. WSIO aims to serve also as a means to standardise the complex interaction scenarios primarily within both SOAP and REST Web services, and secondarily to apply also to batch execution infrastructure in general. | obo | is listed by: BioPortal | nlx_157629 | SCR_010448 | 2026-08-03 09:34:29 | 0 | |||||||||
|
Wheat Trait Ontology Resource Report Resource Website |
Wheat Trait Ontology (RRID:SCR_010449) | CO-WHEAT | controlled vocabulary, data or information resource, ontology | Ontology that defines traits of the International Wheat Information System (IWIS) database and wheat descriptor. | obo | is listed by: BioPortal | nlx_157630 | SCR_010449 | 2026-08-03 09:34:50 | 0 | |||||||||
|
XEML Environment Ontology Resource Report Resource Website |
XEML Environment Ontology (RRID:SCR_010450) | XEO | controlled vocabulary, data or information resource, ontology | Ontology to help plant scientists in documenting and sharing metadata describing the abiotic environment. | obo | is listed by: BioPortal | nlx_157631 | SCR_010450 | 2026-08-03 09:34:42 | 0 | |||||||||
|
Situation-Based Access Control Ontology Resource Report Resource Website |
Situation-Based Access Control Ontology (RRID:SCR_010429) | SITBAC | controlled vocabulary, data or information resource, ontology | Ontology of context-based healthcare access-control policies. | owl | is listed by: BioPortal | nlx_157588 | SCR_010429 | 2026-08-03 09:34:41 | 0 | |||||||||
|
Ontology for Newborn Screening Follow-up and Translational Research Resource Report Resource Website |
Ontology for Newborn Screening Follow-up and Translational Research (RRID:SCR_010389) | ONSTR | controlled vocabulary, data or information resource, ontology | Application ontology covering the domain of newborn screening, follow-up and translational research pertaining to patients diagnosed with inheritable and congenital diseases mainly identified through newborn dried blood spot screening. ONSTR is a central component of the project Newborn Screening Follow-up Data Integration Collaborative (NBSDC), https://nbsdc.org. ONSTR uses the Basic Formal Ontology v2 (BFO2, v2012-07-20) as top-level ontology and extends the classes imported from OBO Foundry ontologies and candidate ontologies. | owl, newborn | is listed by: BioPortal | Inheritable disease, Congenital disease | nlx_157520 | SCR_010389 | 2026-08-03 09:34:49 | 0 | ||||||||
|
Santa Barbara Coastal Observation Ontology Resource Report Resource Website |
Santa Barbara Coastal Observation Ontology (RRID:SCR_010424) | OBOE-SBC | controlled vocabulary, data or information resource, ontology | Extensible Observation Ontology for the Santa Barbara Coastal Long Term Ecological Research project (SBC-LTER). It extends core concepts defined in the OBOE suite that are particular to the Santa Barbara Coastal Long Term Ecological Research project''s data collection activities. These include specific measurement protocols, sites, etc. This is meant as a case study ontology for the Semtools project. | owl | is listed by: BioPortal | nlx_157582 | SCR_010424 | 2026-08-03 09:34:28 | 0 |
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