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http://purl.bioontology.org/ontology/MCBCC
Ontology covering a comprehensive list of cell lines derived from breast tissue, both normal and pathological. The ontology in built in OWL with cross relation to classes- genetic variation, pathological condition, genes, chemicals and drugs. The relations built enable semantic query across different classes
Proper citation: Breast Tissue Cell Lines Ontology (RRID:SCR_006686) Copy
http://purl.bioontology.org/ontology/WB-BT
A structured controlled vocabulary of the anatomy of Caenorhabditis elegans.
Proper citation: C. elegans Gross Anatomy Vocabulary (RRID:SCR_006835) Copy
http://purl.bioontology.org/ontology/IDOBRU
A biomedical ontology in the domain of zoonotic disease brucellosis that is caused by Brucella, a facultative intracellular baterium.
Proper citation: Brucellosis Ontology (RRID:SCR_006795) Copy
http://purl.bioontology.org/ontology/EP
Ontology that contains terms describing single-channel electrophysiological experiments and data obtained using voltage-clamp, current clamp and fluorescence imaging techniques applied at the cell level and multi-channel fluorescence imaging techniques applied at the cell, tissue and whole heart levels.
Proper citation: Cardiac Electrophysiology Ontology (RRID:SCR_007065) Copy
http://purl.bioontology.org/ontology/GRO-CPGA
A structured controlled vocabulary for the anatomy of Gramineae. Please note that this ontology has now been superseded by the Plant Ontology, http://bioportal.bioontology.org/ontologies/1587.
Proper citation: Cereal Plant Gross Anatomy Ontology (RRID:SCR_007061) Copy
http://purl.bioontology.org/ontology/WB-PHENOTYPE
A structured controlled vocabulary of Caenorhabditis elegans phenotypes.
Proper citation: C. elegans Phenotype Vocabulary (RRID:SCR_006924) Copy
http://purl.bioontology.org/ontology/RCD
Ontology of clinical terms Version 3 (CTV3) (Read Codes) (Q199): National Health Service National Coding and Classification Centre
Proper citation: Read Codes Clinical Terms Version 3 (RRID:SCR_006055) Copy
http://purl.bioontology.org/ontology/RCTONT
Ontology specifically for Randomized Controlled Trials in order to facilitate the production of systematic reviews and metaanalysis.
Proper citation: Randomized Controlled Trials Ontology (RRID:SCR_005992) Copy
http://purl.bioontology.org/ontology/RETO
An application ontology for the domain of gene transcription regulation. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, KEGG and orthology relations.
Proper citation: Regulation of Transcription Ontology (RRID:SCR_006238) Copy
An ontology for the description of biological and clinical investigations built with international, collaborative effort. The ontology represents the design of an investigation, the protocols and instrumentation used, the material used, the data generated and the type analysis performed on it. This includes a set of universal terms that are applicable across various biological and technological domains, and domain-specific terms relevant only to a given domain. Currently OBI is being built under the Basic Formal Ontology (BFO). This project was formerly titled the Functional Genomics Investigation Ontology (FuGO) project.
Proper citation: Ontology for Biomedical Investigations (RRID:SCR_006266) Copy
https://bioportal.bioontology.org/ontologies/PCL/
Collection of ontology of provisional cells determined by experimental methods.
Proper citation: Provisional Cell Ontology (RRID:SCR_018332) Copy
Community standard for pathway data sharing. Standard language that aims to enable integration, exchange, visualization and analysis of biological pathway data. Supports data exchange between pathway data groups and thus reduces complexity of interchange between data formats by providing accepted standard format for pathway data. Open and collaborative effort by community of researchers, software developers, and institutions. BioPAX is defined in OWL DL and is represented in RDF/XML format.Uses W3C standard Web Ontology Language, OWL.
Proper citation: Biological Pathways Exchange (RRID:SCR_001681) Copy
https://github.com/obophenotype/porifera-ontology
An ontology covering the anatomy of Porifera (sponges).
Proper citation: Porifera Ontology (RRID:SCR_000134) Copy
http://purl.bioontology.org/ontology/TEO
Ontology for representing events, time, and their relationships.
Proper citation: Time Event Ontology (RRID:SCR_000310) Copy
http://purl.bioontology.org/ontology/VARIO
An ontology for standardized, systematic description of effects, consequences and mechanisms of variations.
Proper citation: Variation Ontology (RRID:SCR_000311) Copy
http://purl.bioontology.org/ontology/SEDI
An ontology for DICOM as used in the SeDI project.
Proper citation: Semantic DICOM Ontology (RRID:SCR_000309) Copy
http://purl.bioontology.org/ontology/DOID
Comprehensive hierarchical controlled vocabulary for human disease representation.Open source ontology for integration of biomedical data associated with human disease. Disease Ontology database represents comprehensive knowledge base of inherited, developmental and acquired human diseases.
Proper citation: Human Disease Ontology (RRID:SCR_000476) Copy
http://purl.bioontology.org/ontology/GAZ
THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 23, 2014. Description not available.
Proper citation: Gazetteer (RRID:SCR_000473) Copy
http://purl.bioontology.org/ontology/PHYLONT
Ontology for Phylogenetic Analysis
Proper citation: Phylogenetic Ontology (RRID:SCR_000912) Copy
http://purl.bioontology.org/ontology/BHO
An application ontology devoted to the standardized recording of phenotypic data related to hemorrhagic disorders.
Proper citation: Bleeding History Phenotype Ontology (RRID:SCR_001165) Copy
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