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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
TriKinetics: Drosophila Activity Monitoring System
 
Resource Report
Resource Website
1+ mentions
TriKinetics: Drosophila Activity Monitoring System (RRID:SCR_021798) instrument resource System from TriKinetics for monitoring Drosophila activity. Includes hardware and DAMSystem3 Software for data acquision and DAMFileScan Software for scanning data for errors. Applied to behavioral activity experiments, including sleep deprivation analyses and general studies of hypoactivity and hyperactivity. monitoring Drosophila activity, behavioral activity experiment, behavioral activity, activity monitoring is related to: TriKinetics DAMSystem3 Software
is related to: Trikinetics DAM FileScan
DOI:10.1101/pdb.prot5518 Restricted SCR_021798 Drosophila Activity Monitoring System, DAM, DAM System, Drosophila Activity Monitor 2026-08-01 12:07:24 9
Trikinetics DAM FileScan
 
Resource Report
Resource Website
1+ mentions
Trikinetics DAM FileScan (RRID:SCR_021817) software resource Software tool used in Drosophila Activity Monitor system to scann data for errors. Also allows user to extract data from monitor files and bin data in different lengths. scann data for errors, Drosophila Activity Monitor system, extract data is related to: TriKinetics: Drosophila Activity Monitoring System SCR_021817 DAM FileScan 2026-08-01 12:07:18 1
Max Planck Institute for Psycholinguistics; Nijmegen; Netherlands
 
Resource Report
Resource Website
1+ mentions
Max Planck Institute for Psycholinguistics; Nijmegen; Netherlands (RRID:SCR_021706) institution Institute is entirely devoted to psycholinguistics – the study of how we produce and understand language, and how we acquire these skills as first or second language learners. The only institution in the world entirely dedicated to psycholinguistics, and is also one of only three among total of 90 within the Max Planck Society to be located outside Germany. has parent organization: Max-Planck-Gesellschaft
is parent organization of: ELAN
SCR_021706 2026-08-01 12:07:23 1
ELAN
 
Resource Report
Resource Website
10+ mentions
ELAN (RRID:SCR_021705) software resource Software annotation tool for audio and video recordings. Annotation can be sentence, word or gloss, comment, translation or description of any feature observed in media. Annotations can be created on multiple layers. Tiers can be hierarchically interconnected. Annotation can either be time-aligned to media or it can refer to other existing annotations. Content of annotations consists of Unicode text and annotation documents are stored in XML format (EAF). Annotation tool, audio recordings, video recordings, Unicode text, annotation documents, documents stored, XML format has parent organization: Max Planck Institute for Psycholinguistics; Nijmegen; Netherlands Free, Available for download, Freely available SCR_021705 2026-08-01 12:07:15 19
Seq-N-Slide
 
Resource Report
Resource Website
10+ mentions
Seq-N-Slide (RRID:SCR_021752) software resource Set of automated workflows for common sequencing based (Illumina) protocols, such as RNA-seq, ChIP-seq, ATAC-seq, WGBS/RRBS methylation, whole genome/exome/targeted variant detection, and contaminant screening. Sequencing data analysis pipelines. Sequencing data analysis pipelines Free, Available for download, Freely available SCR_021752 2026-08-01 12:07:24 16
Halvade Somatic
 
Resource Report
Resource Website
1+ mentions
Halvade Somatic (RRID:SCR_021771) software resource Software implements germline and somatic variant calling pipelines based on best practices pipelines from Broad Institute using Spark framework. Produces VCF output file which contains single nucleotide polymorphisms (SNPs) and short insertions and deletions (indels) when supported by used tools. Program requires Spark on either local cluster with one or more nodes, Amazon EMR cluster or Docker image to run. somatic variant, GATK, Halvade, VCF output file, germline, somatic variant calling, Spark framework uses: GATK Free, Available for download, Freely available SCR_021771 Halvade for Spark 2026-08-01 12:07:24 1
Online Kappa Calculator
 
Resource Report
Resource Website
1+ mentions
Online Kappa Calculator (RRID:SCR_021770) software resource Software tool can be used to calculate kappa, chance adjusted measure of agreement, for any number of cases, categories, or raters. Calculator, calculate kappa, chance adjusted measure of agreement, number of cases, number of categories, number of Free, Freely available SCR_021770 2026-08-01 12:07:16 8
CellScale: MicroTester G2 system
 
Resource Report
Resource Website
1+ mentions
CellScale: MicroTester G2 system (RRID:SCR_022034) instrument resource System includes MicroTester G2 device and software. MicroTester G2 is mechanical test device that can be used to test properties of variety of tissues and materials. Main components of device are load application microbeam, actuators, imaging system, and fluid bath/test chamber. MicroTester G2 software is divided into two modules: data collection module and review and analysis module. instrument, equipment, USEDit, CellScale, mechanical test device, test properties, tissues, materials is listed by: USEDit Restricted https://www.cellscale.com/downloads2/MicroTester%20User%20ManualG2.pdf SCR_022034 SquisherJoy 2026-08-01 12:07:28 3
Shahid Sadoughi University of Medical Sciences; Yazd; Iran
 
Resource Report
Resource Website
1+ mentions
Shahid Sadoughi University of Medical Sciences; Yazd; Iran (RRID:SCR_022031) university Public university located in center of Iran in World Heritage city of Yazd. SCR_022031 Shahid Sadoughi University of Medical Sciences 2026-08-01 12:07:21 1
CoolLED: pE-300ultra
 
Resource Report
Resource Website
1+ mentions
CoolLED: pE-300ultra (RRID:SCR_021972) instrument resource Highly controllable fluorescence microscopy Illumination System which offers broad spectrum LED illumination for imaging most common fluorophores. System offers precise control over wavelength irradiance and shuttering. Used for LED microscope lighting. CoolLED, LED microscope lighting, LED illumination, imaging, fluorophores, control over wavelength irradiance and shuttering, instrument, equipment, USEDit is listed by: USEDit Restricted , Model_Number_pE-300ultra SCR_021972 2026-08-01 12:07:20 3
ntCard
 
Resource Report
Resource Website
1+ mentions
ntCard (RRID:SCR_022010) software resource Software tool for estimating k-mer coverage histogram of genomics data. Streaming algorithm for estimating frequencies of k-mers in genomics datasets. K-mer, estimating k-mer coverage histogram, genomics data, estimating frequencies of k-mers Genome Canada ;
Genome British Columbia ;
British Columbia Cancer Foundation ;
NHGRI R01 HG007182
DOI:10.1093/bioinformatics/btw832 Free, Available for download, Freely available https://github.com/bcgsc/ntCard SCR_022010 2026-08-01 12:07:27 1
Med Associates: Deluxe Behavioral Test Package with Rat Modular Chamber
 
Resource Report
Resource Website
1+ mentions
Med Associates: Deluxe Behavioral Test Package with Rat Modular Chamber (RRID:SCR_021938) instrument resource Operant behavior test package for rat built to meet needs of research studies requiring additional reward and stimulus flexibility. One of Med Associates, Inc. operant conditioning and general behavior product. Med Associates, Inc., operant behavior test package, stimulus flexibility, additional reward Commercially available SCR_021938 Deluxe Behavioral Test Package w/Rat Modular Chamber 2026-08-01 12:07:19 3
University of Southern Denmark; Denmark
 
Resource Report
Resource Website
1+ mentions
University of Southern Denmark; Denmark (RRID:SCR_021943) SDU university University has campuses located in Southern Denmark and on Zealand with main campus in Odense and regional campuses in Slagelse, Kolding, Esbjerg and Sønderborg. University offers joint programes in co-operation with University of Flensburg and University of Kiel. is parent organization of: PolySTest SCR_021943 2026-08-01 12:07:20 1
Alveole Leonardo
 
Resource Report
Resource Website
1+ mentions
Alveole Leonardo (RRID:SCR_021940) software resource Photopatterning software to control PRIMO system including UV illumination module, microscope, camera and stage, and to precisely define experimental conditions.Used to design your own micropatterning manipulations. Alvéole, control PRIMO system, micropatterning manipulations design is related to: Alveole: PRIMO photopatterning module Restricted SCR_021940 Alvéole Leonardo software, Leonardo software 2026-08-01 12:07:20 1
Alveole: PRIMO photopatterning module
 
Resource Report
Resource Website
1+ mentions
Alveole: PRIMO photopatterning module (RRID:SCR_021941) PRIMO instrument resource Photopatterning device for performing micropatterning, microfabrication and hydrogel polymerization.Part of PRIMO system. Alvéole, photopatterning module, micropatterning, microfabrication, hydrogel polymerization, instrument, equipment is related to: Alveole Leonardo Restricted https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_021941.pdf SCR_021941 Alvéole PRIMO, Alveole PRIMO 2026-08-01 12:07:27 1
Narishige: PC 10 Puller
 
Resource Report
Resource Website
1+ mentions
Narishige: PC 10 Puller (RRID:SCR_022057) instrument resource Vertical pipette puller to create microelectrodes from borosilicate capillaries. Vertical pipette puller, microelectrodes, borosilicate capillaries, instrumente, equipment, USEDit Restricted SCR_022057 Narishige PC-10 Puller 2026-08-01 12:07:21 4
Zeitz: DMZ Universal Electrode Puller
 
Resource Report
Resource Website
1+ mentions
Zeitz: DMZ Universal Electrode Puller (RRID:SCR_022056) instrument resource Horizontal pipette puller to pull and polish microelectrodes from borosilicate capillaries. Zeitz-Instrumente Vertriebs GmbH, electrode puller, horizontal pipette puller, pull and polish microelectrodes, borosilicate capillaries, instrument, equipment, USEDit is listed by: USEDit Restricted https://www.zeitz-puller.com/support/manual/ SCR_022056 DMZ Zeitz Puller 2026-08-01 12:07:28 3
HOBOware Pro
 
Resource Report
Resource Website
1+ mentions
HOBOware Pro (RRID:SCR_021915) software resource Weather data logging software used for all HOBO data loggers and wireless data nodes. Used to read out and plot data, and export to spreadsheets for further analysis. Data logging software, HOBO data loggers, wireless data nodes, Onset, HOBO Restricted SCR_021915 Data loger HOBO 2026-08-01 12:07:26 1
Izon Control Suite
 
Resource Report
Resource Website
1+ mentions
Izon Control Suite (RRID:SCR_021922) software resource Data acquisition software. Allows raw or filtered measurement data to be viewed in real time. Part of qNano system. Izon Control Suite Software V3.4 is maintenance software release that updates Izon current software. Izon Science Ltd, data acquisition, nanotechnology is related to: Izon: qNano Gold Free, Available for download, Freely available https://support.izon.com/how-can-i-get-the-latest-software-release SCR_021922 qNano Control Suite Software, Izon Control Suite Software V3.4, Izon Control Suite Software, Izon qNano Control Suite Software 2026-08-01 12:07:20 3
Bio-Rad: T100 Thermal Cycler
 
Resource Report
Resource Website
1+ mentions
Bio-Rad: T100 Thermal Cycler (RRID:SCR_021921) instrument resource Small compact 96well thermal cycler. PCR system features intuitive touch screen and thermal gradient technology to optimize reaction in single run. BioRad, 96well thermal cycler, thermal cycler, PCR system, RT PCR, touch screen, thermal gradient technology, instrument, equipment, USEDit is listed by: USEDit Model_Number_T100_Thermal_Cycler SCR_021921 T100 Thermal Cycler 2026-08-01 12:07:19 7

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