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https://github.com/mfruzan/HaploMaker

Software pipeline for haplotype assembly of diploid genomes using paired end or PacBio reads.

Proper citation: HaploMaker (RRID:SCR_021928) Copy   

•   Source: SciCrunch Registry

https://www.visualsonics.com/product/imaging-systems/vevo-3100

Vevo 3100 micro ultrasound imaging system reduces speckle noise and artifacts while preserving and enhancing critical information for small animal in vivo studies. System helps you visualize your data at high resolution.

Proper citation: Fujifilm: Vevo 3100 Imaging System (RRID:SCR_022152) Copy   

•   Source: SciCrunch Registry

https://www.thermofisher.com/us/en/home/life-science/cell-analysis/cellular-imaging/evos-cell-imaging-systems/models/evos-xl-core.html?ef_id=Cj0KCQjwpImTBhCmARIsAKr58cwB-d2Yr5yUaQuJlpybgp8ywZnlsAUkt4VcZMv6TTE7czxdnzJlVOgaAiv5EALw_wcB:G:s&s_kwcid=AL!3652!3!586406505002!p!!g!!evos%20xl&cid=bid_pca_iie_r01_co_cp1359_pjt0000_bid00000_0se_gaw_bt_lgn_ins&gclid=Cj0KCQjwpImTBhCmARIsAKr58cwB-d2Yr5yUaQuJlpybgp8ywZnlsAUkt4VcZMv6TTE7czxdnzJlVOgaAiv5EALw_wcB

Designed to eliminate complexities of microscopy, EVOS XL Core system captures high-quality brightfield cell images right at your benchtop within minute. Instrument for monitoring cell cultures, either within hood or in cell culture room.

Proper citation: Thermo Fisher: EVOS XL Core Imaging System (RRID:SCR_022190) Copy   

•   Source: SciCrunch Registry

https://www.creative-peptides.com/services/cosmetic-peptides.html

Service to synthesize cosmetic peptides. Provides any level of cosmetic peptides, including GMP grades, using advanced peptide synthesis equipment. Used for development and production of cosmetic peptides.

Proper citation: Creative Peptides Cosmetic Peptides Service Resource (RRID:SCR_022108) Copy   

•   Source: SciCrunch Registry

https://mass-spec.stanford.edu/instruments

System includes Thermo Orbitrap Eclipse Tribid mass spectrometer and Waters M-Class Acquity nanoUPLC. This platform features sequential acquisition capabilities and multiple fragmentation types, enabling complex, in depth proteomic experiments.

Proper citation: Thermo Fisher: Orbitrap Eclipse nanoLC/MS system (RRID:SCR_022212) Copy   

•   Source: SciCrunch Registry

https://www.olympus-lifescience.com/data/olympusmicro/brochures/pdfs/ix71.pdf?rev=EABE

Research inverted system microscope. Olympus IX2 inverted microscope combined with UIS2 optical system. Used for live cell experiments.

Proper citation: Olympus: IX71 Microscope (RRID:SCR_022185) Copy   

•   Source: SciCrunch Registry

https://www.mitochondriasci.com/biomarkers-and-therapeutic-targets.html

Creative Biogene service for discovery of disease specific proteins associated with mitochondrial epigenetic products, which can be used as molecular targets for new drug design and provide molecular markers for early diagnosis of diseases.

Proper citation: Creative Biogene Mitochondrial Biomarkers and Therapeutic Targets Service Resource (RRID:SCR_022240) Copy   

•   Source: SciCrunch Registry

https://mass-spec.stanford.edu/instruments

System includes SQD2 as single quadrupole MS with Waters H-Class Acquity UPLC, operated as open access platform for trained users. SQ Detector2 is single quadrupole mass detector for chromatography compatible with range of chromatography platforms and ionization sources.

Proper citation: Waters: SQD2 LC/MS system (RRID:SCR_022217) Copy   

•   Source: SciCrunch Registry

https://www.zeiss.com/microscopy/us/products/confocal-microscopes/lsm-900-with-airyscan-2.html

Laser scanning confocal microscope for multiplex imaging and analysis., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

Proper citation: Zeiss: LSM 900 with Airyscan 2 (RRID:SCR_022263) Copy   

•   Source: SciCrunch Registry

https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022262.pdf

System for efficient transfection of a variety of hard-to transfect cell lines and primary cells. Using certified aluminium electrode cuvettes this single cuvette system is capable of transfecting various substrates in a low throughput format.

Proper citation: Lonza: Nucleofector 2b Device (RRID:SCR_022262) Copy   

•   Source: SciCrunch Registry

https://www.bdbiosciences.com/en-us/products/instruments/flow-cytometers/research-cell-analyzers/bd-facsymphony-a5-se

Flow cytometer gains full visible spectrum coverage to collect all light emitted without need for filter changes, increasing dye flexibility and number of simultaneous colors. Uses unmix spectral data live in BD FACSDiva Software while retaining familiar compensation workflow. May improve resolution of difficult cells and populations using autofluorescence unmixing.

Proper citation: BD Biosciences: FACSymphony A5 SE Cell Analyzer (RRID:SCR_022674) Copy   

•   Source: SciCrunch Registry

https://www.scireq.com/flexivent/

System for small animal pulmonary function. Used for in vivo respiratory mechanics measurements. Goes beyond traditional resistance and compliance mechanics of pulmonary ventilation, and captures details about mechanical properties of conducting airways, terminal airways and parenchyma. Achieves sensitivity and reproducibility by precisely controlling experimental conditions.

Proper citation: SciReq: flexiVent system (RRID:SCR_022673) Copy   

•   Source: SciCrunch Registry

https://datasus.saude.gov.br/informacoes-de-saude-tabnet/

Portal to find all informations about epidemiology regarding public and suplementary health in Brazil.

Proper citation: TABNET (RRID:SCR_022668) Copy   

•   Source: SciCrunch Registry

https://www.biomerieux-usa.com/clinical/nuclisens-easymag

System for total nucleic acid extraction from variety of sample types and volumes. System automates enhanced magnetic silica version of bioMérieux’s proprietary BOOM technology gold standard for universal extraction of RNA and DNA.Clinical use includes nucleic acid extraction in front of molecular infectious disease assays, molecular oncology assays, molecular genetics assays.

Proper citation: BioMerieux: NucliSens easyMAG system (RRID:SCR_022666) Copy   

•   Source: SciCrunch Registry

https://microbiomedb.org/

Systems biology platform for integrating, mining and analyzing microbiome experiments.Data discovery and analysis web based resource that empowers researchers to fully leverage experimental variables to interrogate microbiome datasets. Used to mine complex microbiome and metagenome studies.

Proper citation: MicrobiomeDB (RRID:SCR_022766) Copy   

•   Source: SciCrunch Registry

https://www.nicd.ac.za/

National public health institute for South Africa, providing disease surveillance, specialised diagnostic services, outbreak response, public health research and capacity building to support the government’s response to communicable disease threats.

Proper citation: National Institute for Communicable Diseases; South Africa (RRID:SCR_022662) Copy   

•   Source: SciCrunch Registry

https://www.fluidigm.com/products-services/instruments/biomark-hd

Automated, high performance PCR/qPCR system that uses microfluidics technology to process samples at nanoliter scale volumes for gene expression, genotyping, sample identification, copy number variation analysis and digital PCR. With wide range of integrated fluidic circuit (IFC) formats available, scaling from mid to high throughput on single system.

Proper citation: Standard BioTools: Biomark HD system (RRID:SCR_022658) Copy   

•   Source: SciCrunch Registry

https://www.npielectronic.com/product/pdes-module/

Pneumatic drug ejection. Used to apply ionic and non-ionic substances in small amounts. Locally precise application with microJECT pipette holder with built-in valve. Also available as 19″ stand alone device.

Proper citation: NPI: Pressure Application Module (RRID:SCR_022657) Copy   

•   Source: SciCrunch Registry

https://www.ncbi.nlm.nih.gov/refseq/about/nonredundantproteins/

Non-redundant RefSeq protein records are currently provided for archaeal and bacterial RefSeq genomes, with exception of selected reference genomes, by NCBI prokaryotic genome annotation pipeline. This scope definition may change in the future to include additional RefSeq sub-kingdoms or other organism groups and some GenBank conceptual translation protein records may provide cross-links to RefSeq non-redundant proteins.

Proper citation: RefSeq non-redundant proteins (RRID:SCR_022748) Copy   

•   Source: SciCrunch Registry

https://www.licor.com/bio/odyssey-xf/

System includes Odyssey XF Imager and Empiria Studio Software for streamlined image acquisition, organization, and analysis of Western blots. Used for imaging near infrared and enhanced chemiluminescent Western blots, to detect multiple targets on same blot with two channel multiplex fluorescence, and document DNA gels.

Proper citation: LI-COR: Odyssey XF Imaging System (RRID:SCR_022510) Copy   

•   Source: SciCrunch Registry