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http://www.npielectronic.de/home.html
Commercial organization that builds and supplies research-related equipment such as amplifiers.
Proper citation: NPI electronic (RRID:SCR_016002) Copy
https://www.tse-systems.com/product-details/intellicage
Behavior instrument, cage allows for assess to home cage behavior and cognitive performance of up to 16 individual mice or rats separately while they are living in social environment. This unique experimental setup fosters natural social behavior in biologically relevant, enriched but highly standardized home cage context. Minimizes need for handling and human intervention, thereby increasing task validity, data reproducibility and ensuring high level of animal welfare.
Proper citation: IntelliCage (RRID:SCR_017404) Copy
http://genomenetwork.nig.ac.jp/index_e.html
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022. Integrated database of experiment data generated by participating research institutes and public databases relating to: 1) transcription starting position of human genes in the human genome, 2) conjunction to control region on transcriptional factors and the human genome 3) protein-protein interaction with a central focus on transcription factors organized for use in genome level research. Gene Search is the function to search the integrated database by using keywords and public IDs. The search results can be visualized by: * Genome Explorer : provides annotation of landmarks (genes, transcription start sites, etc.) aligned in accordance with their genome locations. * PPI Network : provides a graphical view of protein-protein interaction (PPI) network from the experimental data generated under the project and the public datasets. * Expression Profile : clusters genes by expression pattern and display the result with heatmap. The function provides genes which have relation of coregulation and anti-coregulation. * Comparison Viewer : This function gives the view to compare the genomic regions between human and mouse homologous genes. The viewer shows the distribution of transcription start sites (TSS) as the way of separable by tissues or time points with other landmarks on genome region. * Gene Stock : This is the function to save the gene list that you are interested until the session is closed.
Proper citation: Genome Network Platform (RRID:SCR_001737) Copy
http://gerg01.gsc.riken.jp/cage/mm5
A web system, which could search and display to current CAGE library information in CAGE Database.
Proper citation: CAGE Basic Viewer for Mus musculus (RRID:SCR_000451) Copy
https://github.com/bowhan/piPipes
Software set of pipelines to analyze piRNA/transposon from different Next Generation Sequencing libraries (small RNA-seq, RNA-seq, Genome-seq, ChIP-seq, CAGE/Degradome-Seq).
Proper citation: piPipes (RRID:SCR_026809) Copy
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