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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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CHOP Biostatistics and Data Management Core Resource Report Resource Website |
CHOP Biostatistics and Data Management Core (RRID:SCR_009720) | access service resource, service resource, core facility | Core facility that provides the following services: Data management/information technology subcore services, Statistical analysis and database consulting service, Limited statistical analysis service. The Biostatistics and Data Management Core (BDMC) at The Children''s Hospital of Philadelphia (CHOP) supports investigators from virtually all subspecialties of pediatric medicine and supports studies ranging from small, narrowly defined basic science projects to large, multi-site clinical trials. The Biostatistics and Data Management Core currently supports more than 50 funded studies and collaborates with investigators on numerous grant applications each year. The BDMC is staffed by a Scientific Director, Deputy Director, and data management/information technology managers, as well as approximately 20 additional staff members representing the disciplines of biostatistics, data management, information technology and administration. The BDMC is located on the CHOP campus (3535 Market Street), and is operated and supported by Westat, a large health research organization with extensive biostatistics, data management and information technology capabilities. | database maintenance, database development, data analysis |
is listed by: Eagle I has parent organization: University of Pennsylvania; Philadelphia; USA |
nlx_156182 | http://www.research.chop.edu/cores/bdmc/index.php | SCR_009720 | 2025-05-28 11:04:05 | 0 | |||||||||
DFCI Survey and Data Management Core Resource Report Resource Website |
DFCI Survey and Data Management Core (RRID:SCR_009750) | access service resource, service resource, core facility |
Core facility that provides the following services: Data collection, data entry and analysis, Database design, data management and process tracking, Qualitative data collection, management and analysis. The Survey and Data Management Core (SDMC) provides efficient, high-quality survey data collection and management services and consultation to support the research needs of investigators and staff throughout the Harvard Medical research community. The Core, housed within the Center for Population Sciences at the Dana-Farber Cancer Institute, is dedicated to rigorous quantitative and qualitative survey data collection and management. |
research subject private information management, data entry, data analysis, data acquisition, database development, data management |
is listed by: Eagle I has parent organization: Dana-Farber Cancer Institute |
nlx_156217 | http://surveycore.org/ http://www.dana-farber.org/Research/Core-Facilities.aspx#data |
SCR_009750 | 2025-05-28 11:04:06 | 0 | |||||||||
Penn/CHOP CTRC Informatics Services Core Resource Report Resource Website |
Penn/CHOP CTRC Informatics Services Core (RRID:SCR_009866) | access service resource, service resource, core facility | Core facility that provides the following services: Informatics consultative support. The staff of this core gives guidance and/or coordinates data management, capture and analysis on behalf of the investigator within the Institute and assists more broadly with computing issues related to the approved protocol. This core provides services to investigators for their Clinical and Translational Research Center (CTRC)-approved studies that are utilizing other CTRC core services. | image analysis, data analysis, database development |
is listed by: Eagle I has parent organization: University of Pennsylvania; Philadelphia; USA |
nlx_156511 | SCR_009866 | 2025-05-28 11:04:09 | 0 | ||||||||||
OHSU Biomedical Informatics Shared Resource Resource Report Resource Website |
OHSU Biomedical Informatics Shared Resource (RRID:SCR_009966) | access service resource, service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on December 6, 2022. Core facility that provides the following services: Data storage planning, Database design and development, Website development. The BMISR provides expertise in data collection and management to clinical researchers. Through effective trial management and innovative data collection, clinical trial efficiency can be improved and high quality data collected for analysis. This automated data collection, storage and reporting reduce data errors and save time and effort during collection and analysis. Consultation and services are available during every stage of the research process--from grant proposal writing through research data collection, management and analysis. We can provide custom applications for data collection, management and dissemination using a broad array of technologies and tools. We can help with standalone database applications (such as Access), using scannable paper forms, developing web applications, designing database applications, just to name a few. | data storage, database development, web programming |
is listed by: Eagle I has parent organization: Oregon Health and Science University; Oregon; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_156436 | SCR_009966 | 2025-05-28 11:04:12 | 0 | |||||||||
Oregon Clinical and Translational Research Institute Biomedical Informatics Program Resource Report Resource Website 1+ mentions |
Oregon Clinical and Translational Research Institute Biomedical Informatics Program (RRID:SCR_009965) | OCTRI BMIP, BMIP | access service resource, service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on December 6,2022. Core facility provides the following services: Data Management Consultation, Research Databases: REDCap & Customized Databases, Functional Genomics Consultation: Microarray Proteomics. The Biomedical Informatics Program (BMIP) provides investigators with informatics tools and methodologies to support translational researchers. Using a hybrid of collaborative and service approaches, BMIP is continually developing and deploying an array of informatics tools for bench research (bioinformatics), bedside research (clinical research informatics), and translation to practice (medical informatics). BMIP also provides a platform for collaborative and multidisciplinary informatics education and research. The Biomedical Informatics Program includes two major areas of emphasis: Translational Bioinformatics - Novel methodology development, Statistical Genetics, Functional Genomics, Clinical Research Informatics, Research Data Warehouse - Using Epic and other clinical data for research, Clinical research data management software, Epic as an interventional tool for research | data management, database development, protein expression profiling, solexa sequencing, protein microarray assay, next generation sequencing |
is listed by: Eagle I is related to: OHSU Oregon Clinical and Translational Research Center Core Facility has parent organization: Oregon Health and Science University; Oregon; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_156435 | https://www.ohsu.edu/xd/research/centers-institutes/octri/resources/octri-research-services/designing-study.cfm | SCR_009965 | Oregon Clinical, BMIP, Translational Research Institute, Biomedical Informatics Program, OCTRI | 2025-05-28 11:04:12 | 1 | ||||||
University of Pennsylvania Molecular Profiling Facility Bioinformatics Resource Report Resource Website |
University of Pennsylvania Molecular Profiling Facility Bioinformatics (RRID:SCR_010022) | access service resource, service resource, core facility | Core facility that provides the following services: Desktop sequence analysis tools subscription, Database and web applications support, Genomic-scale sequencing analysis, Sequence analysis application support, Transcript profiling consultation service, Transcript profiling application support, Transcript profiling data analysis, Automating large or repetitive tasks, Web space for biological databases, Bioinformatics/genomics resource identification, and Data storage. The bioinformatics staff of the Penn Molecular Profiling Facility is available to provide experimental design and analytical services to users of the Facility and the basic and biomedical research community. Additional services are provided, including grant support, data management and custom computational projects. This facility provides one-on-one training and hosts instructional workshops. Their goal is to ensure that scientists across the University are able to exploit existing and emerging computational technologies, especially related to their genomics scale datasets. | dna sequencing, database development, sequencing assay, transcription profiling assay, data analysis, non-web programming, data transformation, web programming, bioinformatics analysis, data storage |
is listed by: Eagle I is related to: University of Pennsylvania Labs and Facilities has parent organization: University of Pennsylvania; Philadelphia; USA |
Available to external user | nlx_156492, http://eagle-i.itmat.upenn.edu/i/00000139-6da7-ebba-4778-6c3080000000 | SCR_010022 | , University of Pennsylvania, Penn, Molecular Profiling, Facility, UP, Bioinformatics | 2025-05-28 11:04:14 | 0 | ||||||||
UAF Epidemiology and Biostatistics Core Laboratory Resource Report Resource Website |
UAF Epidemiology and Biostatistics Core Laboratory (RRID:SCR_010069) | access service resource, service resource, core facility | Core facility that provides the following services: Data storage service, Confidentiality assistance service, Data entry service, Data importing service, Data extraction and monitoring service, ID linkage and tracking service, Quality control services, Database development and maintenance service. The EBC staff provide support for CANHR research projects in all data-related activities, including data entry, the development and management of databases, and generation of data related to field visits, analyses, and research proposals. It provides expertise in statistical and epidemiologic issues and is responsible for training seminars on the preparation of grants and publications. | data storage, research subject private information management, data entry, data transfer, data management, quality control, database maintenance, database development |
is listed by: Eagle I has parent organization: University of Alaska Fairbanks; Alaska; USA |
nlx_156540 | SCR_010069 | 2025-05-28 11:04:16 | 0 | ||||||||||
Wistar Bioinformatics Core Facility Resource Report Resource Website |
Wistar Bioinformatics Core Facility (RRID:SCR_010203) | BCF, WI, WI BCF | service resource, access service resource, core facility | Core provides High Throughput Data Analysis, Customized Bioinformatics Services, Custom Programming, High Performance Computing, Data management. Located in the Center for Systems and Computational Biology. Provides Cancer Center investigators with database management, software application support, expertise in statistical analyses and computational modeling of biomedical research data. | Bioinformatics Facility, Wistar, mass spectrometry, data analysis, genotyping, protein expression profiling, rna, sequencing, chip-chip, assay, bioinformatics analysis, non-web programming, database development, grid computing, data, Jmanagement, storage |
is listed by: Eagle I is listed by: ABRF CoreMarketplace has parent organization: Wistar Institute |
Open | ABRF_2803, nlx_156682 | https://coremarketplace.org/?FacilityID=2803&citation=1 | https://wistar.org/our-science/shared-facilities/bioinformatics-facility, http://eagle-i.itmat.upenn.edu/i/00000138-7c98-bfbf-fbab-3b8480000000 | SCR_010203 | Bioinformatics Core, Bioinformatics Core Facility | 2025-05-28 11:04:22 | 0 | |||||
Emory University Biostatistics Collaboration Core Facility Resource Report Resource Website 1+ mentions |
Emory University Biostatistics Collaboration Core Facility (RRID:SCR_023521) | BCC | access service resource, service resource, core facility | Core is housed in the Department of Biostatistics and Bioinformatics in the Rollins School of Public Health of Emory University. BCC personnel are available for discussion at all stages of research, including: preparation of grants and contracts, assistance in analyzing and presenting research data, and statistical review of manuscripts in publication process. Provides access to computer hardware and software and personnel with expertise in using major statistical, graphics, and data management packages. Offers services from database development, implementation, and maintenance to production of publication quality graphic and tabular material.BCC tasks are classified into short term tasks that can be completed within three to six months with clear deliverables. | USEDit, ABRF, computer hardware and software acess, database development, database implementation, database maintenance, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Emory University; Georgia; USA |
Restricted | ABRF_1736 | https://coremarketplace.org/?FacilityID=1736&citation=1 | SCR_023521 | The Emory Biostatistics Collaboration Core (BCC) | 2025-05-28 11:12:11 | 2 | ||||||
Penn Clinical Research Computing Unit Resource Report Resource Website |
Penn Clinical Research Computing Unit (RRID:SCR_000301) | access service resource, service resource, core facility | Core facility that provides the following services: Clinical data management, Project operations and compliance support, Custom database application development, Research technology support, Proposal development service. The Clinical Research Computing Unit (CRCU) is a designated core research facility within Penn Medicine, specializing in clinical research informatics (CRI) collaboration and research IT services with a growing number of clinical and translational research investigators at Penn. The CRCU currently supports 58 funded projects, valued at more than $336 M (total costs, all years) to Penn. Although situated within the Center for Clinical Epidemiology and Biostatistics (CCEB), the CRCU supports an increasing volume of its research portfolio led by PIs external to the CCEB. This year the total value of these research programs was $ 243 M, so that the proportion attributable to PIs external to CCEB exceeded 70% ($243 M / $336 M = 72%). Established originally on April 1, 1997, within the Biostatistics Unit of the Center for Clinical Epidemiology and Biostatistics (CCEB) at the University of Pennsylvania School of Medicine, the primary foci were to develop a research computing base for the new program in Biostatistics, as well as to create the capacity and resources to compete successfully for data coordinating centers (DCCs) of federally funded, large-scale, multi center clinical trials, and epidemiological studies. These technology resources also permitted CCEB faculty and staff to provide essential collaborative CRI support for Penn investigators throughout the wide array of basic science and clinical departments, centers, and institutes, thus enhancing their likelihood of funding success. On July 1, 2002, the CRCU restructured its operations and expanded its focus in response to the overall research project growth within the CCEB and the University. The CRCU, as an organizational unit, moved from within the Biostatistics Unit of the CCEB to a CCEB-wide organizational service center for both the Biostatistics and Clinical Epidemiology units. With this restructuring, the CRCU now has two faculty co-directors; one representing each of the CCEB units. The faculty directors ensure that the overall strategy and goals of the service center are aligned with the overall goals of the CCEB, as well as Penn Medicine. In 2005, the leadership model was expanded with the appointment of four (4) Directors of Operations, each of whom report directly to the faculty directors and manage a specialty sub-unit of staff to more effectively coordinate the evolving complexities of the more than 58 sponsored project teams. The original two (2) Senior Directors now focus their leadership efforts on technology infrastructure, new methodologies, special projects and fostering strategic collaborations with other Penn departments, commercial vendors, and other institutions. The University of Pennsylvania aspires to excellence in all domains. The CRCU embraces these ideals, as it partners with faculty and staff to conduct biomedical, behavioral, clinical and translational biomedical research at the highest levels of excellence. Advances in healthcare and improvements in quality of life through research depend on thoughtful science and uncompromising integrity in the collection and handling of information. The CRCU excels in the support of biomedical and clinical research by providing expertise in all facets of research information management, and by understanding the regulatory and cultural environments in which research is conducted. The CRCU fosters collaborative relationships with investigators in the CCEB, other Centers and Institutes throughout the School of Medicine, and across the University, to take an active partnership role in meeting their research goals. The CRCU is committed to continuous improvement in the expertise offered and the services provided, through an emphasis on education and training for staff and through the use of leading technologies and creative solutions. | clinical trial technique, database maintenance, database development, data management |
is listed by: Eagle I has parent organization: University of Pennsylvania; Philadelphia; USA |
nlx_156474 | SCR_000301 | 2025-05-28 10:57:58 | 0 | ||||||||||
Penn/CHOP CTRC Study Design and Biostatistics Core Resource Report Resource Website |
Penn/CHOP CTRC Study Design and Biostatistics Core (RRID:SCR_010043) | access service resource, service resource, core facility | Core facility that provides the following services: Data management assistance, Biostatistical analysis assistance. The Study Design and Biostatistics (SDAB) Core works closely with existing resources to provide targeted study design and biostatistics support to ITMAT/CTSA investigators. The Core serves as a direct provider of services, including protocol review, study design, proposal development, and performance of simple to potentially substantial complex analyses. SDAB integrates the support available with the HUP and CHOP Clinical and Translational Research Centers (CTRCs), the expertise and resources of faculty in the Center for Clinical Epidemiology and Biostatistics / Department of Biostatistics and Epidemiology (CCEB/DBE), the Biostatistics Analysis Center (BAC), and the Biostatistics and Data Management Core (BDMC) at CHOP. | computer privacy management, database development, data management, data analysis, computational modeling technique |
is listed by: Eagle I has parent organization: University of Pennsylvania; Philadelphia; USA |
nlx_156514 | SCR_010043 | 2025-05-28 11:04:15 | 0 | ||||||||||
DF/HCC Biostatistics Core Facility Resource Report Resource Website |
DF/HCC Biostatistics Core Facility (RRID:SCR_009730) | access service resource, service resource, core facility |
Core facility that provides the following services: Scientific computing for data analysis and scientific graphics, Advice and consultation regarding grant applications and management of clinical trials data, Training in study design, data collection, computerization, and statistical methods. The Biostatistics Core facility is a shared resource supporting consultation on biostatistics and epidemiology throughout the Dana-Farber/Harvard Cancer Center (DF/HCC). The mission of the core is to ensure that experimental designs, study monitoring and data analyses take advantage of robust, efficient methods that reflect ''best practices'' in biostatistics and epidemiology; to support NIH-funded peer reviewed grants that do not contain salary support for statisticians; and to enable pilot and small scale studies to become part of successful applications for peer-reviewed funding. These services are available to Dana-Farber / Harvard Cancer Center members only. The Biostatistics Core is located across several of the member institutions of the DF/HCC. To contact the Core, please email or call the statistician associated with your disease site. |
data analysis, database development, data management, research subject private information management, human subject recruitment and protection, clinical trial technique, data acquisition |
is listed by: Eagle I has parent organization: Harvard University; Cambridge; United States |
nlx_156193 | http://www.dfhcc.harvard.edu/core-facilities/biostatistics/ | SCR_009730 | 2025-05-28 11:04:05 | 0 | |||||||||
OHSU Advanced Computing Center Core Facility Resource Report Resource Website |
OHSU Advanced Computing Center Core Facility (RRID:SCR_009959) | ACC | access service resource, service resource, core facility | Provides technology solutions to meet non enterprise IT needs across OHSU for healthcare including limited clinical research project support, academic, and research missions. ACC is also home to Exacloud HPC cluster. | ABRF, USEDit, data storage, remote data storage, redundant data storage, secure data storage, data management, off-site data backup, tape data backup, server hosting, computer cluster hosting, application hosting, website hosting, database maintenance, database development, database hosting, disk data backup |
is listed by: Eagle I is related to: USEDit has parent organization: Oregon Health and Science University; Oregon; USA |
Restricted | nlx_156429 | http://ohsu.eagle-i.net/i/0000012e-1157-0bf2-cfe3-460280000000 | SCR_009959 | Advanced Computing Center, OHSU Advanced Computing Center | 2025-05-28 11:04:12 | 0 | ||||||
MSU Research Computing Group Resource Report Resource Website |
MSU Research Computing Group (RRID:SCR_009945) | access service resource, service resource, core facility |
Core facility that provides the following services: Data management solutions, Managed server hosting, Storage and computation, Software development, IT consulting and training. Researchers face increasing challenges managing IT infrastructure. From software and servers, to data storage and back-ups, the Research Computing Group (RCG) is here to help you with all your IT needs as a researcher at MSU. We have the expertise to provide infrastructure for projects ranging from large-scale computation and storage to small-scale hosting. Contact us to find out how we can help you. |
database maintenance, database development, data management, data transformation, data analysis, data acquisition |
is listed by: Eagle I has parent organization: Montana State University |
nlx_156415 | http://rcg.montana.edu/ | SCR_009945 | 2025-05-28 11:04:11 | 0 |
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