Searching across hundreds of databases

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Current Facets and Filters

  • Related Resources:functional annotation of the mammalian genome (facet)

Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

3 Results - per page

Show More Columns | Download 3 Result(s)

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Website Status Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
RIKEN Brain Science Institute
 
Resource Report
Resource Website
1+ mentions
RIKEN Brain Science Institute (RRID:SCR_004796) BSI topical portal, portal, data or information resource RIKEN Brain Science Institute (BSI) has a mission to produce innovative research and technology leading to scientific discoveries of the brain. In addition, BSI aims to develop domestic and international brain researchers by creating an environment that will integrate various intellectual disciplines and from that convergence find solutions that will ultimately benefit society in the realms of medicine, engineering, business, and education. In striving toward this goal, BSI has become a leading international center for brain research with a reputation for discovery, innovation, training, and globalization of the scientific enterprise. Brain science is valuable not only for the advancement of science but also because it can greatly impact our society and economy. To meet these expectations, the Brain Science Institute (BSI) was established in 1997 as part of RIKEN, an independent research institution supported by the Japanese government. brain, research has parent organization: RIKEN
is parent organization of: Functional Annotation of the Mammalian Genome
is parent organization of: Dynamic Brain Platform
is parent organization of: Concierge
is parent organization of: Expression Atlas of the Marmoset
is parent organization of: Cerebellar Development Transcriptome Database
is parent organization of: Samurai Graph: A highly functional and user-friendly graph plotter
is parent organization of: Cerebellar Platform
is parent organization of: Brain Machine Interface Platform
is parent organization of: Visiome Platform
is parent organization of: INCF Japan Node
nlx_143907 SCR_004796 Brain Science Institute, RIKEN BSI, RIKEN Brain Science Institute 2025-05-12 11:06:46 1
RIKEN integrated database of mammals
 
Resource Report
Resource Website
RIKEN integrated database of mammals (RRID:SCR_006890) RIKEN integrated database of mammals portal, data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 16, 2019.
A database that integrates not only RIKEN''''s original large-scale mammalian databases, such as FANTOM, the ENU mutagenesis program, the RIKEN Cerebellar Development Transcriptome Database and the Bioresource Database, but also imported data from public databases, such as Ensembl, MGI and biomedical ontologies. Our integrated database has been implemented on the infrastructure of publication medium for databases, termed SciNetS/SciNeS, or the Scientists'''' Networking System, where the data and metadata are structured as a semantic web and are downloadable in various standardized formats. The top-level ontology-based implementation of mammal-related data directly integrates the representative knowledge and individual data records in existing databases to ensure advanced cross-database searches and reduced unevenness of the data management operations. Through the development of this database, we propose a novel methodology for the development of standardized comprehensive management of heterogeneous data sets in multiple databases to improve the sustainability, accessibility, utility and publicity of the data of biomedical information.
integration, network, standardization, biomedical, bio.tools is listed by: Debian
is listed by: bio.tools
is related to: Functional Annotation of the Mammalian Genome
is related to: Cerebellar Development Transcriptome Database
is related to: Ensembl
is related to: Mouse Genome Informatics (MGI)
is related to: OBO
has parent organization: RIKEN Yokohama Institute; Kanagawa; Japan
Japanese Ministry of Education Culture Sports Science and Technology MEXT PMID:21076152 THIS RESOURCE IS NO LONGER IN SERVICE nlx_151886, biotools:riken https://bio.tools/riken SCR_006890 2025-05-12 11:08:50 0
CAGE Basic Viewer for Mus musculus
 
Resource Report
Resource Website
1+ mentions
CAGE Basic Viewer for Mus musculus (RRID:SCR_000451) CAGE Basic Viewer data or information resource, data set A web system, which could search and display to current CAGE library information in CAGE Database. genome, gene, tissue, library, map, clone, cage, tag, mus musculus, primer, cdna, transcription, mouse development, theiler stage is related to: Functional Annotation of the Mammalian Genome
is related to: CAGE
has parent organization: RIKEN
nif-0000-30231 SCR_000451 2025-05-06 10:58:55 1

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. RRID Portal Resources

    Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.