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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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∆H3/H4 7 1.4 N* Resource Report Resource Website |
RRID:TSC_SD02039 | Tetrahymena thermophila | These are intermediate germline KO heterokaryons. May be early batch and not tested for somatic rescue. Final germline KO strains are #4 and #7. Non-star side. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | HHT1 (TTHERM_00570560),HHT2 (TTHERM_00189180), HHF1 (TTHERM_00498190), HHF2 (TTHERM_00189170) | Micronucleus: Neo into HHT1, HHF1, HHT2/HHF2 | SD02039 | hht1[∆::neo2]/hht1[∆::neo2]; hhf2,hht2[∆::neo2]/hhf2,hht2[∆::neo2]; hhf1[∆::neo]/hhf1[∆::neo] (mpr1-1; mp-r, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:16908532 | 2025-04-20 03:37:18 | 0 | ||||
|
RNH2 s KO (7)-9-1 Resource Report Resource Website |
RRID:TSC_SD02831 | Tetrahymena thermophila | Somatic KO of RNH2 (RNase H-2) of CU427 From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | RNH2 (TTHERM_00142290) | Macronucleus: neo3 KO of RNH2 | SD02831 | chx1-1/chx1-1 (rnh2[∆::neo3]; pm-r, VI) | TSC, Tetrahymena Stock Center | TSC | 2025-04-20 03:37:18 | 0 | |||||
|
RNH2 s KO (8)-1-1 Resource Report Resource Website |
RRID:TSC_SD02716 | Tetrahymena thermophila | Somatic KO of RNH2 (RNase H-2) of CU428 From the Gorovsky lab, University of Rochester. | RNH2 (TTHERM_00142290) | Macronucleus: neo3 KO of RNH2 | SD02716 | mpr1-1/mpr1-1 (rnh2[∆::neo3]; pm-r, VII) | TSC, Tetrahymena Stock Center | TSC | 2025-04-20 03:37:18 | 0 | |||||
|
B2KO-2 Resource Report Resource Website |
RRID:TSC_SD01906 | Tetrahymena thermophila | Heterozygous germline transformant of BTU2 knockout. Derived from Cu428 X B2086 transformed w/ BHAB-2 (construct). When crossed to CU427, gave cyr and pmr progeny. Can mate to B2KO-6. Created 12/29/97, in soybean until 4/98. B2KO-6 mates with B2KO-1,2,3,4,5,7,8. No others mated. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | BTU2 (TTHERM_00836580) | Micronucleus: H4-neo replaces BTU2 coding Macronucleus: H4-neo replaces BTU2 coding | SD01906 | BTU2/btu2[∆,::H4-neo]; MPR1-1/mpr1-1 (BTU2/btu1[∆,::H4-neo]; MPR1-1/mpr1-1; mp-r, pm-r, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:10831613 | 2025-04-20 03:37:19 | 0 | ||||
|
19788-1 Resource Report Resource Website |
RRID:TSC_SD03091 | Tetrahymena thermophila | Collected by Paul Doerder on 7/29/2008 from the pond designated SG29 in PA (latitude 41.73, longitude -79.23) Has a micronucleus. Mated with < 6 testers. | SD03091 | (?) | TSC, Tetrahymena Stock Center | TSC | 2025-04-20 03:37:18 | 0 | |||||||
|
A2 DE-HA Resource Report Resource Website |
RRID:TSC_SD02044 | Tetrahymena thermophila | pDE124/6 HA rescued GTUKO 5x6 progeny having mutation @ D124-A and E126-A in GTU1-1 gene, also one HA tag@c-terminus; driven by MTT1 promoter. Needs Cd to induce. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | GTU1 (TTHERM_00079520) | Micronucleus: Neo2 into GTU1 locus Macronucleus: GTU1 with mutations D124-A and E126-A and HA tag at c-teminus into the MTT1 locus, partial replacement. | SD02044 | gtu1[∆::neo2]/ gtu1[∆::neo2] (gtu1[∆::neo2]; MTT1/mtt1[∆, (::GTU1, D124A,E126A, HAc)]; pm-r, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:12356864 PMID:16344310 |
2025-04-20 03:37:18 | 0 | ||||
|
C3 491 1b Resource Report Resource Website |
RRID:TSC_SD00028 | Tetrahymena thermophila | See Figure 1 on page 13 of Methods in Cell Biology Volume 62, Tetrahymena thermophila 2000 (Editors D.J. Asai and J.D. Forney) for and excellent diagram explaining how the inbred strains are related to each other. Submitted by Eileen Hamilton, University of California, Santa Barbara | SD00028 | wild type C3 (wild type C3; wild type C3, I) | TSC, Tetrahymena Stock Center | TSC | 2025-04-20 03:37:19 | 0 | |||||||
|
C3 491 6a Resource Report Resource Website |
RRID:TSC_SD00033 | Tetrahymena thermophila | See Figure 1 on page 13 of Methods in Cell Biology Volume 62, Tetrahymena thermophila 2000 (Editors D.J. Asai and J.D. Forney) for and excellent diagram explaining how the inbred strains are related to each other. Submitted by Eileen Hamilton, University of California, Santa Barbara | SD00033 | wild type C3 (wild type C3; wild type C3, VI) | TSC, Tetrahymena Stock Center | TSC | 2025-04-20 03:37:19 | 0 | |||||||
|
UCB404 Resource Report Resource Website |
RRID:TSC_SD03302 | Tetrahymena thermophila | sfr10 complete KO with sfr8::MTT-CHX fully assorted. From the Winey Lab at the University of Colorado Boulder. | SFR10 (TTHERM_00392670), SFR8 (TTHERM_00059100) | Micronucleus: cen2-1[∆::NEO2] Macronucleus: sfr8-1[∆::MTT-CHX] | SD03302 | sfr10-1[∆::NEO2] (sfr10-1[∆::NEO2], sfr8-1[∆::MTT-CHX]; Basal body organization defects., ?) | TSC, Tetrahymena Stock Center | TSC | 2025-04-20 03:37:18 | 0 | |||||
|
LH0 Resource Report Resource Website |
RRID:TSC_SD02694 | Tetrahymena thermophila | Transformation of CU428xB2086, complete knockout of mic histone linker gene with neo2 cassette inserted into Stu1 site. Paromomycin res. to 2 mg/ml Cell lines LH3 and LH6 can mate with each other. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | MLH1 (TTHERM_00471820) | Macronucleus: Neo2 cassette inserted into coding of MLH1 | SD02694 | (mlh1[243::neo2]; pm-r, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:7606784 | 2025-04-20 03:37:18 | 0 | ||||
|
SB2397P Resource Report Resource Website |
RRID:TSC_SD01245 | Tetrahymena thermophila | Resistance to 6-methylpurine was not scored for these panel members. Submitted by Eduardo Orias, University of California, Santa Barbara | SD01245 | CHX1[C3]/CHX1[C3]; pmr1-1/pmr1-1; MAT?/MAT? (CHX1[C3];pmr1-1; MAT?; cy-s, pm-r, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:8725229 PMID:8601476 |
2025-04-20 03:37:19 | 0 | ||||||
|
Flag-HA-CDH2-2086 Resource Report Resource Website |
RRID:TSC_SD02610 | Tetrahymena thermophila | Neo3 in the 5’ region of CHD2 with Flag-HA tag after the ATG, complete replacement in MAC. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | HPL2 (TTHERM_01337400) | SD02610 | (tcd1[5’neo3,FLAG HAn] complete replacement by Southern; pm-r, II) | TSC, Tetrahymena Stock Center | TSC | 2025-04-20 03:37:18 | 0 | ||||||
|
SB2330A Resource Report Resource Website |
RRID:TSC_SD01256 | Tetrahymena thermophila | Resistance to 6-methylpurine was not scored for these panel members. Submitted by Eduardo Orias, University of California, Santa Barbara | SD01256 | chx1-1/chx1-1; PMR1[C3]/PMR1[C3]; MAT3/MAT3 (chx1-1; PMR1[C3]; MAT3; cy-r, pm-s, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:8725229 PMID:8601476 |
2025-04-20 03:37:19 | 0 | ||||||
|
tG2NHA3 Resource Report Resource Website |
RRID:TSC_SD01412 | Tetrahymena thermophila | GTU (gamma tubulin) gene with c-terminal HA tag and two neo2 cassette inserted in 3’ flanking region. Partial replacement From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | GTU1 (TTHERM_00079520) | Macronucleus: HA tag at c-terminus of GTU1 with neo2 in 3’ flanking region | SD01412 | mpr1-1/mpr1-1 (GTU1/gtu1[3’neo2neo2,HAc], VII) | TSC, Tetrahymena Stock Center | TSC | PMID:12356864 | 2025-04-20 03:37:18 | 0 | ||||
|
gl KO HHT2/HHF2 #10 Resource Report Resource Website |
RRID:TSC_SD02623 | Tetrahymena thermophila | The germline knockout heterokaryon of HHT2/HHF2 and the intergenic region has neo cassette completely replacing coding region. 3 independent lines #9, #10, #11. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | HHT2 (TTHERM_00189180) + HHF2 (TTHERM_00189170) | Micronucleus: Neo2 replaces the HHF2 gene and HHT2 gene and the sequence between them | SD02623 | hhf2,hht2[∆::neo2]/hhf2,hht2[∆::neo2] (mpr1-1; mp-r, II) | TSC, Tetrahymena Stock Center | TSC | PMID:15701804 | 2025-04-20 03:37:19 | 0 | ||||
|
gl KO HHT1#2 Resource Report Resource Website |
RRID:TSC_SD02621 | Tetrahymena thermophila | The germline knockout heterokaryon of HHT1 gene with neo cassette completely replacing coding region. Three independent cell lines #1,#2,# 3. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | HHT1 (TTHERM_00570560) | Micronucleus: Neo KO of HHT1 | SD02621 | hht1[∆::neo2]/hht1[∆::neo2]; mpr1-1/mpr1-1 (mpr1-1; mp-r, II) | TSC, Tetrahymena Stock Center | TSC | PMID:15701804 | 2025-04-20 03:37:18 | 0 | ||||
|
TWI11 s KO (8) 8-1 Resource Report Resource Website |
RRID:TSC_SD02864 | Tetrahymena thermophila | Somatic TWI 11 KO. Part of the coding sequence was replaced by neo3. In CU428 From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | TWI11 (TTHERM_00144830) | Macronucleus: TWI11 with neo3 | SD02864 | mpr1-1/mpr1-1 (twi11[∆?::neo3]; pm-r, VII) | TSC, Tetrahymena Stock Center | TSC | 2025-04-20 03:37:18 | 0 | |||||
|
SB2327H Resource Report Resource Website |
RRID:TSC_SD01259 | Tetrahymena thermophila | This strain must be crossed to A* for two rounds and cy-r progeny selected to generate the meiotic segregant panel member which is cy-r, pm-s, mat3. Resistance to 6-methylpurine was not scored for these panel members. Submitted by Eduardo Orias, University of California, Santa Barbara | SD01259 | chx1-1/chx1-1; PMR1[C3]/PMR1[C3]; MAT3/MAT3 (CHX1[C3]; cy-s, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:8601476 PMID:8725229 |
2025-04-20 03:37:19 | 0 | ||||||
|
S-H3.2+GFP/H3.3-431 Resource Report Resource Website |
RRID:TSC_SD01899 | Tetrahymena thermophila | somatic replace H3.3 coding with H3.2+GFP, neo 2 cassette in 5’ flank of H3.3. Not sure if complete replacement. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | HHT2 (TTHERM_00189180) | Macronucleus: HHT2 with GFP c-terminal tag replaces the HHT3 coding region | SD01899 | mpr1-1/mpr1-1 (HHT3?/htt3[5’neo2, ∆, (::HHT2,GFPc)]; pm-r, VII) | TSC, Tetrahymena Stock Center | TSC | PMID:16908532 | 2025-04-20 03:37:18 | 0 | ||||
|
TTMN CU428 Resource Report Resource Website 100+ mentions |
RRID:TSC_SD01419 | Tetrahymena thermophila | CU428 transformed by pTTMN construct and cells selected with 10 mg/ml paromomycin. Partially replaced. Still has wt Metallothionein gene copies in mac as well as other alleles with neo coding. | MTT1 (TTHERM_00241640) | Macronucleus: Neo coding replaces MTT1 coding of some of MTT1 copies, both present | SD01419 | mpr1-1/mpr1-1 (pm-r, VII) | TSC, Tetrahymena Stock Center | TSC | PMID:11891286 | 2025-04-20 03:37:18 | 110 |
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