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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00050738
Source Database: WormBase (WB)
Affected Genes: WBGene00000991(dhs-28)
Genomic Alteration: WBGene00000991(dhs-28)
Availability: unknown
Synonyms: dhs-28(ldr6) X; ldrIs1; ldrIs2.
Notes: ldrIs1 [dhs-3p::dhs-3::GFP + unc-76(+)]. ldrIs2 [mdt-28p::mdt-28::mCherry + unc-76(+)]. ldr6 is G-to-A causing a G158E substitution. Super-sized lipid droplets. [NOTE: The positions indicated in the original Figure 1C of Xie, et al. (2019) are based on an incorrect sequence map and do not reflect the position of the affected amino acid or position in a spliced transcript. The G158E substitution site of the ldr6 mutant is correct and has been independently confirmed by sequence analysis in another lab.] Reference: Xie K, et al. Sci Rep. 2019 Oct 17;9(1):14902. doi: 10.1038/s41598-019-51399-z. PMID: 31624276|"ldrIs1 [dhs-3p::dhs-3::GFP + unc-76(+)]. ldrIs2 [mdt-28p::mdt-28::mCherry + unc-76(+)]. ldr6 is G158A (Gly-Arg). Super-sized lipid droplets. Reference: Xie K, et al. Sci Rep. 2019 Oct 17;9(1):14902. doi: 10.1038/s41598-019-51399-z. PMID: 31624276"
Proper citation: RRID:WB-STRAIN:WBStrain00050738 Copy
http://www.wormbase.org/db/get?name=WBStrain00050843
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: unknown
Synonyms: pha-1(e2123) III; otEx7225.
Notes: otEx7225 [eat-5(fosmid WRM0621dG04)::SL2::NLS::YFP::H2B + pha-1(+) + myo-2p::BFP]. Maintain at 25C or pick BFP+ to retain array. Reference: Bhattacharya A, et al. Cell. 2019 Feb 21;176(5):1174-1189.e16.
Proper citation: RRID:WB-STRAIN:WBStrain00050843 Copy
http://www.wormbase.org/db/get?name=WBStrain00050842
Source Database: WormBase (WB)
Availability: unknown
Synonyms: otIs439; hdIs32.
Notes: Made_by: Oliver Hobert Lab|"otIs439 [lad-2p::GFP + pha-1(+)]. hdIs32 [glr-1::DsRed2]. SMD neurons are labeled with GFP and DsRed2. Can be used to isolate SMD by FACS. Used by CeNGEN project for RNA-Seq (https:"
Proper citation: RRID:WB-STRAIN:WBStrain00050842 Copy
http://www.wormbase.org/db/get?name=WBStrain00050841
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: unknown
Synonyms: pha-1(e2123) III; otEx7121.
Notes: otEx7121 [inx-3(fosmid WRM0636dA10)::SL2::NLS::YFP::H2B + pha-1(+) + myo-2p::BFP]. Maintain at 25C or pick BFP+ to retain array. Reference: Bhattacharya A, et al. Cell. 2019 Feb 21;176(5):1174-1189.e16.
Proper citation: RRID:WB-STRAIN:WBStrain00050841 Copy
http://www.wormbase.org/db/get?name=WBStrain00050848
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: unknown
Synonyms: pha-1(e2123) III; otEx7292.
Notes: otEx7292 [inx-7(fosmid WRM0631dH08)::SL2::NLS::YFP::H2B + pha-1(+) + myo-2p::BFP]. Maintain at 25C or pick BFP+ to retain array. Reference: Bhattacharya A, et al. Cell. 2019 Feb 21;176(5):1174-1189.e16.
Proper citation: RRID:WB-STRAIN:WBStrain00050848 Copy
http://www.wormbase.org/db/get?name=WBStrain00050847
Source Database: WormBase (WB)
Affected Genes: WBGene00002124(inx-2)
Genomic Alteration: WBGene00002124(inx-2)
Availability: unknown
Synonyms: inx-2(ot906 [inx-2::SL2::NLS::yfp::H2B]) X.
Notes: inx-2(ot906) was generated by the insertion of SL2::NLS::YFP::H2B into the endogenous inx-2 locus. Reference: Bhattacharya A, et al. Cell. 2019 Feb 21;176(5):1174-1189.e16.
Proper citation: RRID:WB-STRAIN:WBStrain00050847 Copy
http://www.wormbase.org/db/get?name=WBStrain00050846
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: unknown
Synonyms: pha-1(e2123) III; otEx7233.
Notes: otEx7233 [inx-19(extended fosmid WRM0632bE10)::SL2::NLS::YFP::H2B + pha-1(+) + myo-2p::BFP]. Maintain at 25C or pick BFP+ to retain array. Reference: Bhattacharya A, et al. Cell. 2019 Feb 21;176(5):1174-1189.e16.
Proper citation: RRID:WB-STRAIN:WBStrain00050846 Copy
http://www.wormbase.org/db/get?name=WBStrain00050845
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: unknown
Synonyms: pha-1(e2123) III; otEx7232.
Notes: otEx7232 [inx-15(fosmid WRM0619cH12)::SL2::NLS::YFP::H2B + pha-1(+) + myo-2p::BFP]. Maintain at 25C or pick BFP+ to retain array. Reference: Bhattacharya A, et al. Cell. 2019 Feb 21;176(5):1174-1189.e16.
Proper citation: RRID:WB-STRAIN:WBStrain00050845 Copy
http://www.wormbase.org/db/get?name=WBStrain00050849
Source Database: WormBase (WB)
Availability: unknown
Synonyms: otEx7294.
Notes: otEx7294 [inx-8(fosmid WRM0632dA04)::SL2::NLS::YFP::H2B + rol-6(su1006)]. Pick Rollers to maintain.
Proper citation: RRID:WB-STRAIN:WBStrain00050849 Copy
http://www.wormbase.org/db/get?name=WBStrain00050838
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: unknown
Synonyms: pha-1(e2123) III; otEx7113.
Notes: otEx7113 [inx-12(fosmid WRM0621dC07)::SL2::NLS::YFP::H2B + pha-1(+) + myo-2p::BFP]. Maintain at 25C or pick BFP+ to retain array. Reference: Bhattacharya A, et al. Cell. 2019 Feb 21;176(5):1174-1189.e16.
Proper citation: RRID:WB-STRAIN:WBStrain00050838 Copy
http://www.wormbase.org/db/get?name=WBStrain00050890
Source Database: WormBase (WB)
Affected Genes: WBGene00021911(affl-1)
Genomic Alteration: WBGene00021911(affl-1)
Availability: unknown
Synonyms: Y55B1BR.1(sy1201) III.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of Y55B1BR.1; Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).Left flanking sequence: CCGTACCCGTAGAATGCTTGAAGAAATGGCCGGCCRight flanking sequence: TCGTGGGAACTAAACCATTGAGCCAGCTTCCTCGAAGinserted sequence between the two flanking sequence (STOP-In casette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA : TGAAGAAATGGCCGGCCTCGMethod Reference: G3 (Bethesda). 2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00050890 Copy
http://www.wormbase.org/db/get?name=WBStrain00050895
Source Database: WormBase (WB)
Availability: unknown
Synonyms: nlp-77(sy1216) II.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of nlp-77; Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).Left flanking sequence: GACAACCAGCCGGAGGTCAAGATGTTCCACCATTCRight flanking sequence: CTTCGTAATGCCACTCCAGCTCAACTTCAGAGCTTCinserted sequence between the two flanking sequence (STOP-In casette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA : GGAGTGGCATTACGAAGGAAMethod Reference: G3 (Bethesda). 2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00050895 Copy
http://www.wormbase.org/db/get?name=WBStrain00050894
Source Database: WormBase (WB)
Affected Genes: WBGene00045386(nlp-76)
Genomic Alteration: WBGene00045386(nlp-76)
Availability: unknown
Synonyms: nlp-76(sy1214) X.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of nlp-76; Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).Left flanking sequence: cagTGTTCATCGCAATCTGCGTGCTCTCCCAAAARight flanking sequence: CGCTATGGCCCTCCGTGGTGCACTATTCCGTTCTGinserted sequence between the two flanking sequence (STOP-In casette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA : CACGGAGGGCCATAGCGTTTMethod Reference: G3 (Bethesda). 2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00050894 Copy
http://www.wormbase.org/db/get?name=WBStrain00050892
Source Database: WormBase (WB)
Affected Genes: WBGene00022337(pals-16)
Genomic Alteration: WBGene00022337(pals-16)
Availability: unknown
Synonyms: pals-16(sy1207) III.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of pals-16; Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).Left flanking sequence: GGAATCATTGACAAATTGCAGAACATCAACACCTTRight flanking sequence: Ggtaggttgaagaagttattattggaatttgaaatinserted sequence between the two flanking sequence (STOP-In casette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA : CAGAACATCAACACCTTGGTMethod Reference: G3 (Bethesda). 2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00050892 Copy
http://www.wormbase.org/db/get?name=WBStrain00050932
Source Database: WormBase (WB)
Affected Genes: WBGene00000708(col-135)
Genomic Alteration: WBGene00000708(col-135)
Availability: unknown
Source References: PMID:37541249
Synonyms: col-135(sy1435) IV.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of col-135. Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).left flanking sequence: CCAGCGCTCGGGTATAATATTCGATATCCCTCCTright flanking sequence: ATGAACCAAATCGACAATATGGCCCATATTCGAATGinserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: TTGTCGATTTGGTTCATAGGMethod Reference: G3 (Bethesda)."|"Supplementary_genotype col-135(sy1435)"
Proper citation: RRID:WB-STRAIN:WBStrain00050932 Copy
http://www.wormbase.org/db/get?name=WBStrain00050898
Source Database: WormBase (WB)
Affected Genes: WBGene00013388(Y62F5A.10)
Genomic Alteration: WBGene00013388(Y62F5A.10)
Availability: unknown
Synonyms: Y62F5A.10(sy1222) II.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of Y62F5A.10; Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).Left flanking sequence: GAAGAAGAAGATAACACGGAAGGAGAAATCCAACARight flanking sequence: CCGCACTGAACAAAACAGCATCCAACGACGATCTTCinserted sequence between the two flanking sequence (STOP-In casette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA : TGTTTTGTTCAGTGCGGTGTMethod Reference: G3 (Bethesda). 2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00050898 Copy
http://www.wormbase.org/db/get?name=WBStrain00050897
Source Database: WormBase (WB)
Affected Genes: WBGene00021911(affl-1)|WBGene00021912(affl-2)
Genomic Alteration: WBGene00021911(affl-1), WBGene00021912(affl-2)
Availability: unknown
Synonyms: affl-2(sy975) Y55B1BR.1(sy1220) III.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of Y55B1BR.1 into sup-45 mutant (sy975);Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).Left flanking sequence: CCGTACCCGTAGAATGCTTGAAGAAATGGCCGGCCRight flanking sequence: TCGTGGGAACTAAACCATTGAGCCAGCTTCCTCGAAGinserted sequence between the two flanking sequence (STOP-In casette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA : TGAAGAAATGGCCGGCCTCGMethod Reference: G3 (Bethesda). 2018 Nov 6;8(11):3607-3616"|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of Y55B1BR.1 into sup-45 mutant (sy975);Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).Left flanking sequence: CCGTACCCGTAGAATGCTTGAAGAAATGGCCGGCCRight flanking sequence: TCGTGGGAACTAAACCATTGAGCCAGCTTCCTCGAAGinserted sequence between the two flanking sequence (STOP-In casette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA : TGAAGAAATGGCCGGCCTCGMethod Reference: G3 (Bethesda). 2018 Nov 6;8(11):3607-3616. affl-2 formerly known as sup-45."
Proper citation: RRID:WB-STRAIN:WBStrain00050897 Copy
http://www.wormbase.org/db/get?name=WBStrain00050896
Source Database: WormBase (WB)
Affected Genes: WBGene00044088(oac-2)
Genomic Alteration: WBGene00044088(oac-2)
Availability: unknown
Synonyms: oac-2(sy1218) V.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of oac-2; Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).Left flanking sequence: aattgtggaatttttagATTTCGAAGAATCCTCCCRight flanking sequence: GCTGTACTACTTGACCATCTTCCTCATAGTAGTCATGinserted sequence between the two flanking sequence (STOP-In casette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA : GGAGTGGCATTACGAAGGAAMethod Reference: G3 (Bethesda). 2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00050896 Copy
http://www.wormbase.org/db/get?name=WBStrain00050935
Source Database: WormBase (WB)
Affected Genes: WBGene00003747(nlp-9)
Genomic Alteration: WBGene00003747(nlp-9)
Availability: unknown
Synonyms: nlp-9(sy1451) V.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of nlp-9. Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).left flanking sequence: gaaaaaaagagagATGGATCGATTCGCCACCAGATright flanking sequence: TTATCGCCCTTCTTCTGGTTCTTTTACAAATTGgtginserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: CAGAAGAAGGGCGATAAATCMethod Reference: G3 (Bethesda)."
Proper citation: RRID:WB-STRAIN:WBStrain00050935 Copy
http://www.wormbase.org/db/get?name=WBStrain00050934
Source Database: WormBase (WB)
Affected Genes: WBGene00003744(nlp-6)
Genomic Alteration: WBGene00003744(nlp-6)
Availability: unknown
Synonyms: nlp-6(sy1449) X.
Notes: Made_by: Heenam Park/Mandy Tan|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of nlp-6. Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).left flanking sequence: GCGACTCGCCTTCGTTCTTCTCGTCTCGGCGTGCGright flanking sequence: TCATGGCAATGGCTGCTCCAAAACAAATGGTGTTCinserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: TCTCGTCTCGGCGTGCGTCAMethod Reference: G3 (Bethesda)."
Proper citation: RRID:WB-STRAIN:WBStrain00050934 Copy
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