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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00005269
Source Database: WormBase (WB)
Affected Genes: WBGene00005032(sra-6)
Genomic Alteration: WBGene00005032(sra-6)
Availability: unknown
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:CX5334
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00005269 Copy
http://www.wormbase.org/db/get?name=WBStrain00005267
Source Database: WormBase (WB)
Affected Genes: WBGene00004854(slt-1)
Genomic Alteration: WBGene00004854(slt-1)
Availability: available
Synonyms: slt-1(eh15) X.
Alternate IDs: WB-STRAIN:CX5000, CGC_CX5000
Notes: Made_by: David Hughes/Joe Hao|"slt-1 mutants have no dissecting-scope phenotype. They have a 40% penetrant defect in the ventral guidance of the AVM neuron scored with mec-4::GFP, a mild defect in CAN cell migration that is enhanced by a ceh-23::GFP transgene, and a mild defect in midline crossing by PVQ neurons scorable with sra-6::GFP. slt-1(eh15) is a complex rearrangement that duplicates the endogenous slt-1 gene, but disrupts both duplicated copies. The two copies are linked on X but the exact distance between them is not known. The duplication probably extends >13 kb based on Southern blotting. Deletion breakpoints for the first copy of slt-1 are as follows: nucleotides 26219 to 28163 and 28197 to 28294 in cosmid C26G2 are deleted. The second copy of slt-1 contains the following structure: nucleotides 28197 to 28294 in C26G2 are deleted, followed by a duplication of nucleotides 28300 to 28396 in C26G2 that begins 5 nucleotides after the deletion. Both copies of slt-1 are mutant, as confirmed by both DNA sequence and RT-PCR analysis of slt-1 mRNA. Scoring for homozygosity of the slt-1 allele by PCR is difficult because of the two copies of the gene and because the small deletion and the small duplication of the second copy of slt-1 are the same size. The mutant can be followed indirectly by X linkage (very closely linked to unc-3). It may be possible to make a specific primer within the duplicated region that detects a unique band in the slt-1 mutant."
Proper citation: RRID:WB-STRAIN:WBStrain00005267 Copy
http://www.wormbase.org/db/get?name=WBStrain00005300
Source Database: WormBase (WB)
Availability: available
Source References: PMID:22301316, PMID:33820969, PMID:38564369
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:CX11264, CGC_CX11264
Notes: C. elegans wild isolate. Reference: Andersen EC, et al. Nat Genet. 2012 Jan 29;44(3):285-90.|"Made_by: A. Sivasundar"
Proper citation: RRID:WB-STRAIN:WBStrain00005300 Copy
http://www.wormbase.org/db/get?name=WBStrain00005301
Source Database: WormBase (WB)
Availability: unknown
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:CX11268
Notes: Isolated_by A. Sivasundar
Proper citation: RRID:WB-STRAIN:WBStrain00005301 Copy
http://www.wormbase.org/db/get?name=WBStrain00005288
Source Database: WormBase (WB)
Availability: unknown
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:CX7615
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00005288 Copy
http://www.wormbase.org/db/get?name=WBStrain00005283
Source Database: WormBase (WB)
Affected Genes: WBGene00001552(gcy-32)|WBGene00006845(unc-122)
Genomic Alteration: WBGene00001552(gcy-32), WBGene00006845(unc-122)
Availability: unknown
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:CX6858
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00005283 Copy
http://www.wormbase.org/db/get?name=WBStrain00005282
Source Database: WormBase (WB)
Affected Genes: WBGene00001135(eat-4)
Genomic Alteration: WBGene00001135(eat-4)
Availability: available
Synonyms: eat-4(ky5) III; kyEx844.
Alternate IDs: WB-STRAIN:CX6827, CGC_CX6827
Notes: kyEx844 contains [odr-3::eat-4 + elt-2::GFP].
Proper citation: RRID:WB-STRAIN:WBStrain00005282 Copy
http://www.wormbase.org/db/get?name=WBStrain00005278
Source Database: WormBase (WB)
Affected Genes: WBGene00002141(inx-19)
Genomic Alteration: WBGene00002141(inx-19)
Availability: available
Source References: PMID:38302462
Synonyms: inx-19(ky634) I.
Alternate IDs: WB-STRAIN:CX6161, CGC_CX6161
Notes: Previously called nsy-5.
Proper citation: RRID:WB-STRAIN:WBStrain00005278 Copy
http://www.wormbase.org/db/get?name=WBStrain00005210
Source Database: WormBase (WB)
Affected Genes: WBGene00006749(unc-9)
Genomic Alteration: WBGene00006749(unc-9)
Availability: available
Synonyms: unc-9(fc16) X.
Alternate IDs: WB-STRAIN:CW129, CGC_CW129
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00005210 Copy
http://www.wormbase.org/db/get?name=WBStrain00005298
Source Database: WormBase (WB)
Availability: unknown
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:CX11259
Notes: Isolated_by A. Sivasundar
Proper citation: RRID:WB-STRAIN:WBStrain00005298 Copy
http://www.wormbase.org/db/get?name=WBStrain00005211
Source Database: WormBase (WB)
Affected Genes: WBGene00001520(gas-1)
Genomic Alteration: WBGene00001520(gas-1)
Availability: available
Source References: PMID:9952163, PMID:33542359, PMID:33713125, PMID:33640978, PMID:37957360
Synonyms: gas-1(fc21) X.
Alternate IDs: WB-STRAIN:CW152, CGC_CW152
Notes: Hypersensitive to volatile anesthetics. Temperature sensitive hypomorph and should be propagated at or below 20C. Low brood size.|"Supplementary_genotype gas-1(fc21) X"|"WBStrain mapped, WBPaper00061258 added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00005211 Copy
http://www.wormbase.org/db/get?name=WBStrain00005296
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:22301316, PMID:33820969, PMID:38564369
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:CX11254
Notes: Isolated_by A. Sivasundar
Proper citation: RRID:WB-STRAIN:WBStrain00005296 Copy
http://www.wormbase.org/db/get?name=WBStrain00005294
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:19285466, PMID:31422888, PMID:38302462
Synonyms: kyIR1(V, CB4856>N2).
Alternate IDs: WB-STRAIN:CX10774
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00005294 Copy
http://www.wormbase.org/db/get?name=WBStrain00005293
Source Database: WormBase (WB)
Affected Genes: WBGene00007119(calf-1)
Genomic Alteration: WBGene00007119(calf-1)
Availability: available
Source References: PMID:38302462
Synonyms: calf-1(ky867) V.
Alternate IDs: WB-STRAIN:CX10207, CGC_CX10207
Notes: Saheki Y, Bargmann CI. Nat Neurosci. 2009 Oct;12(10):1257-65.
Proper citation: RRID:WB-STRAIN:WBStrain00005293 Copy
http://www.wormbase.org/db/get?name=WBStrain00005209
Source Database: WormBase (WB)
Affected Genes: WBGene00006811(unc-79)
Genomic Alteration: WBGene00006811(unc-79)
Availability: available
Synonyms: unc-79(ec1) III.
Alternate IDs: WB-STRAIN:CW16, CGC_CW16
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00005209 Copy
http://www.wormbase.org/db/get?name=WBStrain00005207
Source Database: WormBase (WB)
Affected Genes: WBGene00016630(acer-1)
Genomic Alteration: WBGene00016630(acer-1)
Availability: available
Synonyms: acer-1(rj15) II.
Alternate IDs: WB-STRAIN:CV385, CGC_CV385
Notes: acer-1(rj15) is a 7 nt deletion (removes nt 35-41 from the start codon) resulting in an out-of-frame deletion. Increased histone acetylation. Reference: Gao J, et al., PLoS Genet. 2015 Mar 13;11(3):e1005029.
Proper citation: RRID:WB-STRAIN:WBStrain00005207 Copy
http://www.wormbase.org/db/get?name=WBStrain00005203
Source Database: WormBase (WB)
Affected Genes: WBGene00000254(bli-4)|WBGene00019247(syp-4)
Genomic Alteration: WBGene00000254(bli-4), WBGene00019247(syp-4)
Availability: available
Synonyms: syp-4(tm2713) I/hT2 [bli-4(e937) let-?(q782) qIs48] (I;III).
Alternate IDs: WB-STRAIN:CV87, CGC_CV87
Notes: Homozygous lethal allele balanced by bli-4- and GFP-marked translocation. Heterozygotes are WT with pharyngeal GFP signal, and segregate WT GFP, arrested hT2 aneuploids, and non-GFP syp-4(tm2713) homozygotes (viable but throw 97% dead eggs, 40% males). Homozygous hT2[bli-4 let-? qIs48] inviable. Pick WT GFP and check for correct segregation of progeny to maintain. Reference: Smolikove S, et al. (2009) PLoS Genet 5(10):e1000669.|"Mutagen:UV/TMP"
Proper citation: RRID:WB-STRAIN:WBStrain00005203 Copy
http://www.wormbase.org/db/get?name=WBStrain00005204
Source Database: WormBase (WB)
Affected Genes: WBGene00001078(dpy-19)|WBGene00001609(glp-1)|WBGene00011415(him-18)
Genomic Alteration: WBGene00001078(dpy-19), WBGene00001609(glp-1), WBGene00011415(him-18)
Availability: available
Source References: PMID:36176234
Synonyms: him-18(tm2181)/qC1 [dpy-19(e1259) glp-1(q339) qIs26] III.
Alternate IDs: WB-STRAIN:CV98, CGC_CV98
Notes: Mutagen:UV/TMP|"qIs26 [lag-2::GFP + rol-6(su1006)]. Heterozygous animals show roller phenotype and GFP signal at the distal tip cells. Segregates roller GFP(+) heterozygotes, wild-type moving GFP(-) him-18(tm2181) homozygotes. qC1 [dpy-19(e1259) glp-1(q339) qIs26] homozygous animals are dead. P0 him-18(tm2181) homozygous animals show 80% embryonic lethality and 12% high incidence of male at F1. Pick roller GFP(+) worms to maintain. Reference: Saito TT, et al. (2009) PLoS Genet 5:e1000735."|"Supplementary_genotype him-18(tm2181)III/qCq dpy-19(e1259)glp-1(q339)nls189 III"
Proper citation: RRID:WB-STRAIN:WBStrain00005204 Copy
http://www.wormbase.org/db/get?name=WBStrain00005202
Source Database: WormBase (WB)
Affected Genes: WBGene00000254(bli-4)|WBGene00020068(cra-1)
Genomic Alteration: WBGene00000254(bli-4), WBGene00020068(cra-1)
Availability: available
Synonyms: cra-1(tm2144) I/hT2 [bli-4(e937) let-?(q782) qIs48] (I;III).
Alternate IDs: WB-STRAIN:CV78, CGC_CV78
Notes: Homozygous lethal allele balanced by bli-4- and GFP-marked translocation. Heterozygotes are WT with pharyngeal GFP signal, and segregate WT GFP, arrested hT2 aneuploids, and non-GFP cra-1(tm2144) homozygotes (99.7% embryonic lethality, 61% larval lethality, Him). Homozygous hT2[bli-4 let-? qIs48] inviable. Pick WT GFP and check for correct segregation of progeny to maintain. Reference: Smolikove S, et al. (2008) PLoS Genet 4(6):e1000088.|"Mutagen:UV/TMP"
Proper citation: RRID:WB-STRAIN:WBStrain00005202 Copy
http://www.wormbase.org/db/get?name=WBStrain00005222
Source Database: WormBase (WB)
Affected Genes: WBGene00003849(odr-2)
Genomic Alteration: WBGene00003849(odr-2)
Availability: available
Source References: PMID:8348618, PMID:36652499
Synonyms: odr-2(n2145) V.
Alternate IDs: WB-STRAIN:CX2304, CGC_CX2304
Notes: Defective chemotaxis to some volatile odorants: benzaldehyde, isoamyl alcohol.
Proper citation: RRID:WB-STRAIN:WBStrain00005222 Copy
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