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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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XE1890 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040656 | Caenorhabditis elegans | aex-6(sa24) I; wpEx287. | Made_by: Alexander Lin-Moore|"wpEx287 [unc-47p::aex-6::unc-54 3'UTR + myo-2p::mCherry]. Pick mCherry+ to maintain. aex-6 a.k.a. rab-27. Reference: Sekine Y, et al. Cell reports. 2018; 23(2):415-428." | WBGene00000089(aex-6) | WBGene00000089(aex-6) | WB-STRAIN:WBStrain00040656 | WormBase (WB) | WB | available | WB-STRAIN:XE1890, CGC_XE1890 | WormBase | 2026-10-31 09:53:07 | 0 | |||
|
XE1873 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040655 | Caenorhabditis elegans | aex-6(sa24) I; oxIs12 X. | Made_by: Alexander Lin-Moore|"oxIs12 [unc-47p::GFP] X. GFP expression in GABA neurons. aex-6 a.k.a. rab-27. Reference: Sekine Y, et al. Cell reports. 2018; 23(2):415-428." | WBGene00000089(aex-6) | WBGene00000089(aex-6) | WB-STRAIN:WBStrain00040655 | WormBase (WB) | WB | available | WB-STRAIN:XE1873, CGC_XE1873 | WormBase | 2026-10-31 09:53:06 | 0 | |||
|
XE1892 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040657 | Caenorhabditis elegans | wpEx287. | Made_by: Alexander Lin-Moore|"wpEx287 [unc-47p::aex-6::unc-54 3'UTR + myo-2p::mCherry]. Pick mCherry+ to maintain. aex-6 a.k.a. rab-27. Reference: Sekine Y, et al. Cell reports. 2018; 23(2):415-428." | WB-STRAIN:WBStrain00040657 | WormBase (WB) | WB | available | WB-STRAIN:XE1892, CGC_XE1892 | WormBase | 2026-10-31 09:53:07 | 0 | |||||
|
XE1581 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040653 | Caenorhabditis elegans | wpSi10 II; eri-1(mg366) IV; rde-1(ne219) V; lin-15B(n744) X. | Made_by: C. Firnhaber|"wpSi10 [unc-17p::rde-1::SL2::sid-1 + Cbr-unc-119(+)] II. Maintain at 15-20C, sterile at 25C. Superficially wild-type. Cholinergic neuron-specific RNAi strain. Sensitivity to feeding RNAi is limited to the cholinergic neurons; all other tissues resistant. Reference: Firnhaber C & Hammarlund M. PLoS Genet. 2013 Nov;9(11):e1003921." | WBGene00001332(eri-1)|WBGene00003004(lin-15)|WBGene00004323(rde-1)|WBGene00023497(lin-15B) | WBGene00001332(eri-1), WBGene00003004(lin-15), WBGene00004323(rde-1), WBGene00023497(lin-15B) | WB-STRAIN:WBStrain00040653 | WormBase (WB) | WB | available | WB-STRAIN:XE1581, CGC_XE1581 | WormBase | 2026-10-31 09:53:06 | 0 | |||
|
XM1007 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040667 | Caenorhabditis elegans | fog-3(q443) I/hT2 [bli-4(e937) let-?(q782) qIs48] (I;III); unc-43(n498) IV. | Heterozygotes are Unc with pharyngeal GFP signal. Homozygous hT2[bli-4 let-? qIs48] are inviable. Homozygous unc-43(n498); fog-3(q443) animals are females. | WBGene00000254(bli-4)|WBGene00001483(fog-3)|WBGene00006779(unc-43) | WBGene00000254(bli-4), WBGene00001483(fog-3), WBGene00006779(unc-43) | WB-STRAIN:WBStrain00040667 | WormBase (WB) | WB | available | WB-STRAIN:XM1007, CGC_XM1007 | WormBase | 2026-10-31 09:53:07 | 0 | |||
|
XZ2081 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040700 | Caenorhabditis elegans | hif-1(ia4) V; yakEx143. | yakEx143 [dpy-7p::hif-1(cDNA) + myo-2p::mCherry]. Pick animals with red pharynx to maintain. HIF-1 expressed from a hypodermal-specific promoter in hif-1 mutant background for tissue-specific rescuing experiments. yakEx143 does not rescue lethality in hif-1 mutant animals exposed to 50ppm hydrogen sulfide. Reference: Topalidou I & and Miller DL. bioRxiv 174581; doi: https: | WBGene00001851(hif-1) | WBGene00001851(hif-1) | WB-STRAIN:WBStrain00040700 | WormBase (WB) | WB | available | WB-STRAIN:XZ2081, CGC_XZ2081 | WormBase | 2026-10-31 09:53:08 | 0 | |||
|
XM1012 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040669 | Caenorhabditis elegans | inx-22(tm1661) I; fog-2(q71) V. | Mutagen:UV/TMP|"Negative regulator of oocyte maturation. Male/Female strain." | WBGene00001482(fog-2)|WBGene00002144(inx-22) | WBGene00001482(fog-2), WBGene00002144(inx-22) | WB-STRAIN:WBStrain00040669 | WormBase (WB) | WB | available | WB-STRAIN:XM1012, CGC_XM1012 | WormBase | 2026-10-31 09:53:07 | 0 | |||
|
XZ2082 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040701 | Caenorhabditis elegans | hif-1(ia4) V; yakEx144. | yakEx144 [unc-14p::hif-1(cDNA) + myo-2p::mCherry]. Pick animals with red pharynx to maintain. HIF-1 expressed from unc-14 promoter in hif-1 mutant background for tissue-specific rescuing experiments. yakEx144 rescues lethality in hif-1 mutant animals exposed to 50ppm hydrogen sulfide. Reference: Topalidou I & and Miller DL. bioRxiv 174581; doi: https: | WBGene00001851(hif-1) | WBGene00001851(hif-1) | WB-STRAIN:WBStrain00040701 | WormBase (WB) | WB | available | WB-STRAIN:XZ2082, CGC_XZ2082 | WormBase | 2026-10-31 09:53:08 | 0 | |||
|
XJ1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040663 | Caenorhabditis elegans | EMPTY | EMPTY | WB-STRAIN:WBStrain00040663 | WormBase (WB) | WB | unknown | PMID:21642964 | WB-STRAIN:XJ1 | WormBase | 2026-10-31 09:53:07 | 0 | ||||
|
XK194 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040664 | Caenorhabditis elegans | unc-46(e177) let-479(s1576) V/nT1 [qIs51] (IV;V). | EMPTY | WBGene00002689(let-479)|WBGene00006782(unc-46) | WBGene00002689(let-479), WBGene00006782(unc-46) | WB-STRAIN:WBStrain00040664 | WormBase (WB) | WB | available | WB-STRAIN:XK194, CGC_XK194 | WormBase | 2026-10-31 09:53:07 | 0 | |||
|
YY156 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00040755 | Caenorhabditis elegans | nrde-2(gg95) II. | Reference: Guang S, et al. Nature. 2010 Jun 24;465(7301):1097-101. | WBGene00011333(nrde-2) | WBGene00011333(nrde-2) | WB-STRAIN:WBStrain00040755 | WormBase (WB) | WB | available | PMID:33594200 | WB-STRAIN:YY156, CGC_YY156 | WormBase | 2026-10-31 09:53:09 | 1 | ||
|
YY13 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040754 | Caenorhabditis elegans | rrf-3(mg373) II; oxls12. | oxls12 [unc-47p::GFP + lin-15(+)]. Enhanced RNAi. Sterile at 25 degrees. [NOTE: the genotype of YY13 as previously annotated only as rrf-3(mg373)] References: Pavelec DM, et al. Genetics. 2009 Dec;183(4):1283-95. PMID: 19797044. McIntire SL, et al. Nature. 1997 Oct 23;389(6653):870-6. PMID: 9349821. | WBGene00004510(rrf-3) | WBGene00004510(rrf-3) | WB-STRAIN:WBStrain00040754 | WormBase (WB) | WB | available | WB-STRAIN:YY13, CGC_YY13 | WormBase | 2026-10-31 09:53:09 | 0 | |||
|
YY160 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00040757 | Caenorhabditis elegans | nrde-1(gg88) III. | eri-1(mg366) has been crossed out of the background. Reference: Burkhart KB, et al. PLoS Genet. 2011 Aug;7(8):e1002249. | WBGene00007577(nrde-1) | WBGene00007577(nrde-1) | WB-STRAIN:WBStrain00040757 | WormBase (WB) | WB | available | PMID:33594200 | WB-STRAIN:YY160, CGC_YY160 | WormBase | 2026-10-31 09:53:09 | 1 | ||
|
YY158 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040756 | Caenorhabditis elegans | nrde-3(gg66) X. | Nuclear RNAi defective. Reference: Guang et al., Science 321(5888):537-41 (2009). | WBGene00019862(nrde-3) | WBGene00019862(nrde-3) | WB-STRAIN:WBStrain00040756 | WormBase (WB) | WB | available | WB-STRAIN:YY158, CGC_YY158 | WormBase | 2026-10-31 09:53:09 | 0 | |||
|
YT17 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00040751 | Caenorhabditis elegans | crh-1(tz2) III. | Clumpy, pale and slightly small, tend to dig into plate. Daf-c at 27C. Do not distribute this strain; other labs should request it from the CGC.|"Mutagen:UV/TMP" | WBGene00000793(crh-1) | WBGene00000793(crh-1) | WB-STRAIN:WBStrain00040751 | WormBase (WB) | WB | available | WB-STRAIN:YT17, CGC_YT17 | WormBase | 2026-10-31 09:53:09 | 4 | |||
|
YY11 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040753 | Caenorhabditis elegans | dcr-1(mg375) III | Enhanced RNAi. Sterile at 25 degrees. Referenced in Pavelec et al. Genetics (2009). | WBGene00000939(dcr-1) | WBGene00000939(dcr-1) | WB-STRAIN:WBStrain00040753 | WormBase (WB) | WB | available | PMID:38547071 | WB-STRAIN:YY11, CGC_YY11 | WormBase | 2026-10-31 09:53:09 | 0 | ||
|
YW16 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040752 | Caenorhabditis elegans | ced-12(tp2) I. | Persisting cell corpses. Distal tip cell migration defective. | WBGene00000426(ced-12) | WBGene00000426(ced-12) | WB-STRAIN:WBStrain00040752 | WormBase (WB) | WB | available | WB-STRAIN:YW16, CGC_YW16 | WormBase | 2026-10-31 09:53:09 | 0 | |||
|
YY968 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00040769 | Caenorhabditis elegans | znfx-1(gg544[3xflag::gfp::znfx-1]) II; pgl-1(gg547[pgl-1::3xflag::tagRFP]) IV. | 3xflag::gfp inserted into endogenous znfx-1 locus, and 3xflag::tagRFP inserted into endogenous pgl-1 locus using CRISPR/Cas9 engineering. Reference: Wan G, et al. Nature. 2018 May;557(7707):679-683. | WBGene00003992(pgl-1)|WBGene00014208(znfx-1) | WBGene00003992(pgl-1), WBGene00014208(znfx-1) | WB-STRAIN:WBStrain00040769 | WormBase (WB) | WB | available | PMID:33438773 PMID:37749091 |
WB-STRAIN:YY968, CGC_YY968 | WormBase | 2026-10-31 09:53:09 | 2 | ||
|
YY169 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040760 | Caenorhabditis elegans | ergo-1(gg102) V. | Enhanced RNAi. Isolated in lin-15B RNAi screen. Referenced in Pavelec et al. Genetics (2009). | WBGene00019971(ergo-1) | WBGene00019971(ergo-1) | WB-STRAIN:WBStrain00040760 | WormBase (WB) | WB | available | WB-STRAIN:YY169, CGC_YY169 | WormBase | 2026-10-31 09:53:09 | 0 | |||
|
YY470 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00040767 | Caenorhabditis elegans | dcr-1(mg375) III. | Enhanced RNAi response. Sterile at 25 C. Outcrossed from YY11; wild-type for mut-16. Superficially wild-type. | WBGene00000939(dcr-1) | WBGene00000939(dcr-1) | WB-STRAIN:WBStrain00040767 | WormBase (WB) | WB | available | WB-STRAIN:YY470, CGC_YY470 | WormBase | 2026-10-31 09:53:09 | 0 |
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