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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
pax2ab593/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL44 | Danio rerio | Unknown | anatomical system, ansulate commissure, apoptotic process, blood circulation, brain, caudal commissure, caudal fin, cerebellum, cilium assembly, closure of optic fissure, commissura cerebelli, cranial ganglion, cranial nerve II, cranial nerve IV, determination of heart left/right asymmetry, diencephalon, epiphysis, eye, fertilization, forebrain midbrain boundary, gut epithelium, heart, hindbrain, hyaloid vessel, inner limiting membrane, lens, locus ceruleus development, locus coeruleus, macula, macula utricle, midbrain, midbrain hindbrain boundary, midbrain-hindbrain boundary development, midbrain-hindbrain boundary initiation, midbrain hindbrain boundary neural keel, Muller cell, nervous system, oculomotor nucleus, oocyte, optic chiasm, optic cup, optic fissure, optic furrow, optic nerve development, optic tectum, otic vesicle, otolith, outer limiting membrane, parasympathetic nervous system development, pericardium, peripheral olfactory organ, post-vent region, pronephric duct, pronephric glomerulus, pronephric tubule, pronephros, pronephros development, retina, retina layer formation, retinal ganglion cell axon guidance, retinal inner plexiform layer, retinal neural layer, retinal outer plexiform layer, retinal pigmented epithelium, swim bladder, thyroid follicle, trochlear motor nucleus, utricle, whole organism, yolk anatomical system, ansulate commissure (all 70) | pax2ab593/+ (AB) | b593 | ZL44 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:50 | 0 | |||
|
-au72Tg (AB) Resource Report Resource Website |
RRID:ZIRC_ZL14216 | Danio rerio | Transgenic Insertion | -au72Tg (AB) | au72Tg | ZL14216 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:50 | 0 | ||||
|
-au68Tg (AB) Resource Report Resource Website |
RRID:ZIRC_ZL13887 | Danio rerio | Transgenic Insertion | -au68Tg (AB) | au68Tg | ZL13887 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:50 | 0 | ||||
|
-au70Tg (AB) Resource Report Resource Website |
RRID:ZIRC_ZL14214 | Danio rerio | Transgenic Insertion | -au70Tg (AB) | au70Tg | ZL14214 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:50 | 0 | ||||
|
-au67Tg (AB) Resource Report Resource Website |
RRID:ZIRC_ZL13886 | Danio rerio | Transgenic Insertion | -au67Tg (AB) | au67Tg | ZL13886 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:50 | 0 | ||||
|
mpv17a9; -jf92Tg; mitfaw2 (AB) Resource Report Resource Website |
RRID:ZIRC_ZL13801 | Danio rerio | Allele with multiple variantsTransgenic InsertionAllele with one point mutation | aerobic respiration, caudal fin, developmental pigmentation, eye, head, integument, iridophore, iridophore, larval melanophore stripe, larval melanophore stripe, liver, melanocyte, melanocyte, melanocyte differentiation, melanocyte migration, melanophore stripe, melanophore stripe, neural crest cell migration, oxidative phosphorylation, pigmentation, pigment cell, pigment cell, post-vent region, retinal cone cell, retinal pigmented epithelium, swimming behavior, trunk, trunk, vertebra, whole organism, whole organism, xanthophore aerobic respiration, caudal fin (all 32) | mpv17a9; -jf92Tg; mitfaw2 (AB) | a9 [(part of) Casper fish, (part of) Crystal fish, roy]jf92Tg [Tg(elavl3:CaMPARI2)]w2 | ZL13801 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:50 | 0 | |||
|
-au75Tg (AB) Resource Report Resource Website |
RRID:ZIRC_ZL13889 | Danio rerio | Transgenic Insertion | -au75Tg (AB) | au75Tg | ZL13889 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:50 | 0 | ||||
|
bw100Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL2101 | Danio rerio | Transgenic Insertion | bw100Tg/+ (AB) | bw100Tg | ZL2101 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:51 | 0 | ||||
|
mpv17a9; gnat2w21 (AB) Resource Report Resource Website |
RRID:ZIRC_ZL10382 | Danio rerio | Allele with multiple variantsAllele with one point mutation | aerobic respiration, eye, eye, integument, iridophore, larval melanophore stripe, liver, melanocyte, melanocyte, melanophore stripe, oxidative phosphorylation, pigment cell, pigment cell, post-vent region, retinal cone cell, sensory system, trunk, visual behavior, visual perception, whole organism aerobic respiration, eye (all 20) | mpv17a9; gnat2w21 (AB) | a9 [(part of) Casper fish, (part of) Crystal fish, roy]w21 | ZL10382 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:50 | 0 | |||
|
smob641/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL52 | Danio rerio | Allele with one point mutation | adenohypophyseal placode, anterior commissure, anterior macula, atrium, axon guidance, brain, cardiac ventricle, caudal commissure, caudal fin, cell death, cell population proliferation, cellular senescence, cerebellum, cleithrum, commissural neuron axon guidance, common cardinal vein, cranial nerve II, diencephalon development, dopaminergic neuron, embryo development, endocardium development, endocrine cell, eye, fast muscle cell, floor plate, floor plate development, floor plate formation, forebrain, forebrain dorsal/ventral pattern formation, head, heart, heart primordium, hindbrain, inner ear, inner ear development, inner ear morphogenesis, intestine, Kupffer''s vesicle, lapillus, lateral floor plate, liver, liver development, macula, mandibular arch skeleton, medial floor plate, mesothelial cell, midbrain, midbrain hindbrain boundary, muscle cell differentiation, muscle pioneer, myoseptum, myotome, nervous system, oligodendrocyte development, oligodendrocyte differentiation, optic chiasm, optic stalk, otolith, pancreas, pancreas development, pancreas primordium, pars superior ear, pectoral fin, pericardium, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pillar of the anterior semicircular canal, positive regulation of DNA-templated transcription, posterior macula, postoptic commissure, post-vent region, primary motor neuron, proctodeum, retina development in camera-type eye, retinal ganglion cell, Rohon-Beard neuron, roof plate spinal cord region, sagitta, secondary motor neuron, segmental plate, sensory neuron, sensory system, skeletal muscle tissue development, slow muscle cell, smoothened signaling pathway, smooth muscle, somite, spinal cord, supraoptic commissure, surface structure, swim bladder, swim bladder development, swim bladder formation, tela chorioidea, trunk, vasculogenesis, ventral mesenchyme, ventral thalamus, ventricular system, whole organism, yolk adenohypophyseal placode, anterior commissure (all 101) | smob641/+ (AB) | b641 | ZL52 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:50 | 0 | |||
|
-cz3325Tg (AB) Resource Report Resource Website 1+ mentions |
RRID:ZIRC_ZL13480 | Danio rerio | Transgenic Insertion | -cz3325Tg (AB) | cz3325Tg | ZL13480 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:52 | 1 | ||||
|
fbxw4dhi2058Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1192 | Danio rerio | Transgenic Insertion | cranial ganglion, cranial nerve, esophagus, intestinal bulb, pigment cell, whole organism cranial ganglion, cranial nerve (all 6) | fbxw4dhi2058Tg/+ (AB) | dhi2058Tg | ZL1192 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:52 | 0 | |||
|
wnt11fh224/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1181 | Danio rerio | Allele with one point mutation | atrium, CaP motoneuron, ceratobranchial cartilage, convergent extension, dorsal lateral line neuromast, dorsal-ventral polarized posterior lateral line neuromast, embryonic viscerocranium morphogenesis, heart, heart looping, motor neuron axon guidance, occipital lateral line neuromast, pharyngeal pouch, skeletal muscle acetylcholine-gated channel clustering, VaP motor neuron, whole organism atrium, CaP motoneuron (all 15) | wnt11fh224/+ (AB) | fh224 | ZL1181 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:52 | 0 | |||
|
eomesafh105/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1182 | Danio rerio | Allele with one point mutation | blastodisc, dorsal fin, endodermal cell fate specification, extension, forerunner cell group, invagination involved in gastrulation with mouth forming second, microtubule cytoskeleton organization, yolk, yolk syncytial layer blastodisc, dorsal fin (all 9) | eomesafh105/+ (AB) | fh105 | ZL1182 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:52 | 0 | |||
|
skrcm23/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL453 | Danio rerio | Unknown | skrcm23/+ (AB) | cm23 | ZL453 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:51 | 0 | ||||
|
-fcc43Tg (AB) Resource Report Resource Website |
RRID:ZIRC_ZL14553 | Danio rerio | Transgenic Insertion | -fcc43Tg (AB) | fcc43Tg | ZL14553 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:52 | 0 | ||||
|
bigcm5/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL858 | Danio rerio | Unknown | bigcm5/+ (AB) | cm5 | ZL858 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:51 | 0 | ||||
|
ndr1cz35/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL466 | Danio rerio | Allele with one insertion | axis, chorion, diencephalon, embryonic axis specification, endoderm, epiphysis, eye, forebrain, forerunner cell group, hatching, hatching gland cell, head, nervous system, neural tube, notochord, nucleus of the tract of the postoptic commissure, optic tectum, pineal complex, polster, prechordal plate, sensory system, shield, somite, tectal ventricle, trunk axis, chorion (all 25) | ndr1cz35/+ (AB) | cz35 | ZL466 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:52 | 0 | |||
|
smad5dty40/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL865 | Danio rerio | Allele with one point mutation | anal fin, blood circulation, caudal fin, caudal vein, caudal vein plexus, ceratohyal cartilage, cloacal chamber, dorsal/ventral pattern formation, ectodermal cell fate commitment, embryonic retina morphogenesis in camera-type eye, embryonic viscerocranium morphogenesis, epiphysis, erythroid lineage cell, ethmoid cartilage, fin, floor plate, heart looping, hindbrain, interneuron, locus ceruleus development, Meckel''s cartilage, median fin fold, monocyte, mouth, notochord, nucleate erythrocyte, otic placode, paraxial mesoderm, pharyngeal arch, pharyngeal arch 2, pharyngeal arch 3-7 skeleton, pharyngeal arch 6, pharyngeal arch 7, pharyngeal arch cartilage, pharyngeal pouch 2, post-anal tail morphogenesis, posterior lateral line neuromast, post-vent region, pronephric duct, pronephros, retina, rhombomere 3, rhombomere 5, Rohon-Beard neuron, roof of mouth development, somite, splanchnocranium, surface structure, tail bud, thoracic duct, trabecula cranii, trigeminal sensory neuron, trunk, trunk neural crest cell, ventral fin fold, whole organism anal fin, blood circulation (all 56) | smad5dty40/+ (AB) | dty40 | ZL865 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:52 | 0 | |||
|
espl1cz280/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1289 | Danio rerio | Allele with one point mutation | cell population proliferation, head, mitotic cell cycle, embryonic, mitotic spindle organization, nervous system, post-vent region, whole organism cell population proliferation, head (all 7) | espl1cz280/+ (AB) | cz280 | ZL1289 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:51 | 0 |
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