Searching the RRID Resource Information Network
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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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scarb2ahi1463Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL533 | Danio rerio | Transgenic Insertion | brain, gut, head, hindbrain, liver, melanocyte, notochord, pigment cell, post-vent region, trunk, whole organism brain, gut (all 11) | scarb2ahi1463Tg/+ (AB) | hi1463Tg | ZL533 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | |||
|
gpc4hi1688Tg/+ (AB) Resource Report Resource Website 1+ mentions |
RRID:ZIRC_ZL541 | Danio rerio | Transgenic Insertion | adaxial cell, anterior neural plate, anterior-posterior polarized posterior lateral line neuromast, axis, axis elongation, cell, cell migration involved in gastrulation, cell morphogenesis, ceratobranchial 5 bone, ceratohyal cartilage, chondrocyte, convergent extension, convergent extension involved in axis elongation, convergent extension involved in gastrulation, cranial cartilage, dorsal convergence, dorsal lateral line neuromast, dorsal-ventral polarized posterior lateral line neuromast, endochondral bone, endochondral ossification, endoderm, endothelial cell, ethmoid cartilage, extension, eye, floor plate, forebrain, glycosaminoglycan metabolic process, head, head muscle, hypophyseal fenestra, interhyal cartilage, intermandibularis, Kupffer''s vesicle, mandibular arch skeleton, maxilla, Meckel''s cartilage, mesodermal cell migration, muscle cell migration, myotome, neural keel, neurocranial trabecula, notochord, notochord formation, notochord morphogenesis, notochord posterior region, ossification, palate, palatoquadrate cartilage, pancreas development, pancreatic bud, pharyngeal arch 3-7 skeleton, pharyngeal arch cartilage, post-anal tail morphogenesis, posterior lateral line neuromast primordium migration, posterior lateral line primordium, post-vent region, prechordal plate, pronephric duct, quadrate, quadrate-anguloarticular joint, retroarticular, rhombomere, slow muscle cell, somite, striated muscle cell development, symplectic, trunk, ventral fin fold, whole organism adaxial cell, anterior neural plate (all 70) | gpc4hi1688Tg/+ (AB) | hi1688Tg | ZL541 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 2 | |||
|
clasp1bhi2820Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1734 | Danio rerio | Transgenic Insertion | anatomical system, brain, caudal fin, head, heart, heart contraction, pericardium, post-vent region, somite, trunk, whole organism anatomical system, brain (all 11) | clasp1bhi2820Tg/+ (AB) | hi2820Tg | ZL1734 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | |||
|
vps18hi2499aTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL796 | Danio rerio | Transgenic Insertion | bile canaliculus, gut, hepatocyte, integument, iridophore, liver, melanocyte, notochord, notochord cell vacuolation, notochord morphogenesis, pigmentation, pigment cell, retina, trunk, whole organism bile canaliculus, gut (all 15) | vps18hi2499aTg/+ (AB) | hi2499aTg | ZL796 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | |||
|
nsfbhi2869Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1821 | Danio rerio | Transgenic Insertion | brain, eye, lens, neuromast, pigment cell, retinal pigmented epithelium, whole organism brain, eye (all 7) | nsfbhi2869Tg/+ (AB) | hi2869Tg | ZL1821 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | |||
|
pou5f3hi349Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL759 | Danio rerio | Transgenic Insertion | pou5f3hi349Tg/+ (AB) | hi349Tg | ZL759 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | ||||
|
atp6v1e1bhi577aTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL490 | Danio rerio | Transgenic Insertion | eye, eye photoreceptor cell, gut, head, inner ear, larval melanophore stripe, mandibular arch skeleton, melanocyte, musculoskeletal movement, notochord, notochord cell vacuolation, notochord morphogenesis, otolith, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pigmentation, pigment cell, post-vent region, response to external stimulus, retinal pigmented epithelium, retina morphogenesis in camera-type eye, sensory perception of touch, sensory system, trunk, ventral fin fold, whole organism eye, eye photoreceptor cell (all 26) | atp6v1e1bhi577aTg/+ (AB) | hi577aTg | ZL490 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | |||
|
nrf1hi399Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL494 | Danio rerio | Transgenic Insertion | eye, nervous system, photoreceptor cell, retina, retinal inner nuclear layer, retinal photoreceptor layer, sensory system eye, nervous system (all 7) | nrf1hi399Tg/+ (AB) | hi399Tg | ZL494 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | |||
|
dlahi781Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1199 | Danio rerio | Transgenic Insertion | axon guidance, caudal tuberculum, CiD, diencephalon, embryonic pattern specification, floor plate, hindbrain, macula, macula utricle, Mauthner neuron, neuromuscular junction development, notochord, otic vesicle, otolith, posterior crista, posterior lateral line ganglion, rhombomere, Rohon-Beard neuron, secondary motor neuron, spinal cord, trunk, VeLD, whole organism axon guidance, caudal tuberculum (all 23) | dlahi781Tg/+ (AB) | hi781Tg | ZL1199 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | |||
|
atp6v1hhi923Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1067 | Danio rerio | Transgenic Insertion | anterior lateral line neuromast, bone mineralization, brain, cellular senescence, centrum, eye, eye pigmentation, gut, head, larval melanophore stripe, liver, melanocyte, nervous system, neuromast, pericardium, pigmentation, pigment cell, retinal pigmented epithelium, retina morphogenesis in camera-type eye, swim bladder, trunk, vertebra, whole organism anterior lateral line neuromast, bone mineralization (all 23) | atp6v1hhi923Tg/+ (AB) | hi923Tg | ZL1067 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | |||
|
-hsc127Tg (AB) Resource Report Resource Website |
RRID:ZIRC_ZL14539 | Danio rerio | Transgenic Insertion | -hsc127Tg (AB) | hsc127Tg | ZL14539 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | ||||
|
mib1hi904Tg/+ (AB) Resource Report Resource Website 1+ mentions |
RRID:ZIRC_ZL502 | Danio rerio | Transgenic Insertion | anterior commissure, anterior crista, anterior lateral line placode, apoptotic process, artery, auditory epithelial support cell, auditory receptor cell fate specification, axon guidance, blood circulation, blood vessel endothelial cell migration, brain, caudal fin, caudal tuberculum, cell death, cell differentiation involved in pronephros development, central canal, central nervous system, CiD, CoSA, cranial nerve II, cristae formation, determination of left/right symmetry, dorsal aorta, dorsoventral diencephalic tract, ectoderm development, embryonic pattern specification, endothelial cell, endothelial cell development, enterocyte differentiation, epidermal cell fate specification, epiphysis, eye, floor plate formation, forebrain, fourth ventricle, generation of neurons, gut, habenula, habenula development, hair cell anterior macula, hair cell posterior macula, head, heart looping, hematopoietic stem cell differentiation, hindbrain, hindbrain commissure, hindbrain development, hindbrain interneuron, hindbrain neural keel, inner ear, integument, intersegmental vessel, intestinal epithelium, ionocyte progenitor cell, lapillus, lateral floor plate, mandibular arch skeleton, Mauthner neuron, medial longitudinal fasciculus, melanocyte, midbrain hindbrain boundary, motor behavior, musculoskeletal movement, NaK ionocyte, nervous system, neural plate, neural retina development, neural tube, neural tube development, neuroepithelial cell, neurogenesis, notochord, optic cup, optic tectum, otic placode formation, otic vesicle, otolith, otolith development, pectoral fin, pectoral fin endoskeletal disc, pectoral fin fold, pectoral fin musculature, pericardium, pharyngeal arch 3, pharyngeal vasculature, pigment cell, polster, posterior cardinal vein, posterior crista, posterior lateral line ganglion, posterior lateral line neuromast, posterior lateral line neuromast primordium migration, posterior lateral line placode, posterior lateral line primordium, postoptic commissure, post-vent region, primary neuron, pronephric duct, pronephric tubule, pronephros, response to external stimulus, retina, retina layer formation, retinal ganglion cell, retinal neural layer, rhombic lip, rhombomere, rhombomere boundary formation, Rohon-Beard neuron, roof plate spinal cord region, sagitta, secondary motor neuron, semicircular canal, sensory system, somite, somite 2, somite 3, somite 4, somite 5, somite border, somitogenesis, spinal cord, spinal cord development, spinal cord motor neuron differentiation, statoacoustic (VIII) ganglion, swimming behavior, taste bud, taste bud formation, tela chorioidea, thyroid gland development, thyroid primordium, trigeminal ganglion, trigeminal placode, trunk, vasculogenesis, VeLD, ventral spinal cord interneuron differentiation, ventral spinal cord interneuron specification, ventral wall of dorsal aorta, vH ionocyte, whole organism, yolk anterior commissure, anterior crista (all 142) | mib1hi904Tg/+ (AB) | hi904Tg | ZL502 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 1 | |||
|
-hsc134Tg; -hsc150Tg (AB) Resource Report Resource Website |
RRID:ZIRC_ZL14540 | Danio rerio | Transgenic InsertionTransgenic Insertion | -hsc134Tg; -hsc150Tg (AB) | hsc134Tghsc150Tg | ZL14540 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:56 | 0 | ||||
|
paf1hi3789Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1443 | Danio rerio | Transgenic Insertion | cardiac muscle cell, cardiac muscle progenitor cell migration to the midline involved in heart field formation, closure of optic fissure, embryonic heart tube morphogenesis, enteric neuron, eye, gut, head, heart, liver, mandibular arch skeleton, melanocyte, myocardial precursor, optic cup, optic cup morphogenesis involved in camera-type eye development cardiac muscle cell, cardiac muscle progenitor cell migration to the midline involved in heart field formation (all 15) | paf1hi3789Tg/+ (AB) | hi3789Tg | ZL1443 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | |||
|
ebna1bp2hi3625aTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1444 | Danio rerio | Transgenic Insertion | brain, extension, eye, fourth ventricle, head, hindbrain, pericardium, pigmentation, pigment cell, trunk, whole organism, yolk brain, extension (all 12) | ebna1bp2hi3625aTg/+ (AB) | hi3625aTg | ZL1444 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | |||
|
rpl11hi3820bTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1677 | Danio rerio | Transgenic Insertion | anatomical system, apoptotic process, brain, caudal fin, cell population proliferation, cellular senescence, central nervous system, cerebellum, common cardinal vein, erythroid lineage cell, extension, eye, eye pigmentation, fin, forebrain, fourth ventricle, gut, head, heart, hemoglobin biosynthetic process, hemopoiesis, hindbrain, inner ear, intermediate cell mass of mesoderm, liver, midbrain hindbrain boundary, midbrain-hindbrain boundary structural organization, mouth, nervous system, nucleate erythrocyte, nucleate erythrocyte maturation, optic tectum, otic placode, otolith, pericardium, post-vent region, protein kinase B signaling, regulation of DNA-templated transcription, regulation of glucose metabolic process, ribosomal protein S6 kinase activity, swim bladder, trunk, whole organism, yolk anatomical system, apoptotic process (all 44) | rpl11hi3820bTg/+ (AB) | hi3820bTg | ZL1677 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | |||
|
foxi1hi3747Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL532 | Danio rerio | Transgenic Insertion | adenohypophyseal placode, auditory capsule, basihyal cartilage, ceratobranchial cartilage, ceratohyal cartilage, cranial cartilage, embryonic viscerocranium morphogenesis, epithelial cell differentiation, facial ganglion, glossopharyngeal ganglion, hyomandibula, hyosymplectic cartilage, inner ear, inner ear morphogenesis, integument, mandibular arch skeleton, Meckel''s cartilage, middle lateral line ganglion, mouth, nervous system, neural crest cell migration, neurogenic field, neurogenic placode, olfactory pit, otic placode, otic vesicle, otic vesicle development, otic vesicle morphogenesis, otic vesicle protrusion, otolith, palatoquadrate cartilage, pharyngeal arch, pharyngeal arch 1, pharyngeal arch 2 skeleton, pharyngeal arch 3, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pharyngeal arch 3 skeleton, pharyngeal arch 4, pharyngeal arch 4 skeleton, pharyngeal arch 5 skeleton, pharyngeal arch 6 skeleton, pharyngeal arch 7 skeleton, pharyngeal arch cartilage, pharyngeal endoderm, pharyngeal pouch 1, pharyngeal pouch 2, pillar of the semicircular canal, radial glial cell, swim bladder, trunk, vagal ganglion, vagal neural crest, ventral anterior lateral line ganglion, ventral mandibular arch, whole organism adenohypophyseal placode, auditory capsule (all 56) | foxi1hi3747Tg/+ (AB) | hi3747Tg | ZL532 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | |||
|
ctdp1hi998Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1814 | Danio rerio | Transgenic Insertion | eye, gut, head, liver eye, gut (all 4) | ctdp1hi998Tg/+ (AB) | hi998Tg | ZL1814 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:55 | 0 | |||
|
otx2bhu3625/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1927 | Danio rerio | Allele with one point mutation | adenohypophysis, ceratobranchial cartilage, eye, gill, head, hypothalamus, larval feeding behavior, mandibular arch skeleton, neural retina development, retinal neural layer, ventral mandibular arch adenohypophysis, ceratobranchial cartilage (all 11) | otx2bhu3625/+ (AB) | hu3625 | ZL1927 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:56 | 0 | |||
|
gata5hu3392/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL2042 | Danio rerio | Allele with one point mutation | anatomical system, cardiac muscle progenitor cell migration to the midline involved in heart field formation, cell migration to the midline involved in heart development, embryonic heart tube development, heart, heart looping, heart morphogenesis, heart primordium, heart rudiment, heart tube, intestine, left/right pattern formation, myocardial precursor, pericardium, pharyngeal epithelium, pharynx, whole organism anatomical system, cardiac muscle progenitor cell migration to the midline involved in heart field formation (all 17) | gata5hu3392/+ (AB) | hu3392 | ZL2042 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:56 | 0 |
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