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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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W-Phf24em11Iexas Resource Report Resource Website |
RRID:RGD_38676451 | Rattus norvegicus | This strain was establishe by CRISPR-Cas9 system at Osaka University. Target sequence is CCATGGGGGTGTTGATGTCCAAG (CCA is PAM sequence). Back ground strain is Crlj:Wistar (WI). This strain is line No. 11 and has a 128-bp deletion in Phf24 gene. Off-target effects (214 candidate region) have not yet been examined. National BioResource Project for the Rat in Japan | 38676451 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2020-09-17) | 38676451 | RGD | 2026-10-17 01:54:06 | 0 | |||||
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SS-Prr5em2Mcwi Resource Report Resource Website |
RRID:RGD_14398465 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a mutation in the Prr5 gene of SS/JrHsdMcwi rat embryos. The resulting mutation is a 5-bp deletion in the exon 1 of the gene. Contact MCW rat distribution at [email protected] | 14398465 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2019-04-19) | 14398465 | RGD | 2026-10-17 01:54:06 | 0 | |||||
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SD-Myh7bem1Blar+/- Resource Report Resource Website |
RRID:RGD_126925949 | Rattus norvegicus | The Myh7b knockout SD rats were generated using the CRISPR/Cas9 system targeting exon 2, resulting 7 bases deletion of exon 2 and generated a new termination codon TGA in exon 3. The heterzygous Myh7b+/- rats were crossed to generate littermate controls. The birth ratio of wild type (WT):Myh7b+/-:Myh7b-/- was approximately 1:2:1, indicating that Myh7b-/- did not cause fetal death. | 126925949 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126925949 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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WI;WDB-Prdm14tm1(H2BVenus)Nips Resource Report Resource Website |
RRID:RGD_125097491 | Rattus norvegicus | Targeting vector was designed to replace 1st and 4th exons encoding DNA-binding domain of Prdm14 locus with H2BVenus. The vector was introduced into WDB/Nips-ES1/Nips (RGD ID:10054010) embryonic stem cells by electroporation . Targeted ES cells were injected into Crlj:WI blastocysts to produce chimeric rats. The chimeric rats were crossed with Crlj:WI rats to produce heterozygous founder rats. These rat strains are being maintained by crossing the founder rats with Crlj:WI rats. Homozygous Prdm14 knocked-in rats have the germ cell-deficient phenotype. Section of Mammalian Transgenesis, Center for Genetic Analysis of Behavior, National Institute for Physiological Sciences, Okazaki, Aichi 444-8787, JAPAN | 125097491 | mutant | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Embryo (as of 2021-04-01) | 125097491 | RGD | 2026-10-17 01:54:06 | 0 | |||||
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WI-Sall1em1Nips Resource Report Resource Website |
RRID:RGD_125097492 | Rattus norvegicus | Sall1 mutation was induced by injecting a mix of two pX330 expressing Cas9 and sgRNA targeting the sequence into Crlj:WI rat embryos. The resulting mutation is a 4456-bp deletion in exon 2 to 3. Homozygous Sall1 knocked-out rats had the anephric phenotype at E21.5, and died at postnatal Day-1. Section of Mammalian Transgenesis, Center for Genetic Analysis of Behavior, National Institute for Physiological Sciences, Okazaki, Aichi 444-8787, JAPAN. | 125097492 | mutant | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Embryo (as of 2021-04-01) | 125097492 | RGD | 2026-10-17 01:54:06 | 0 | |||||
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F344-Rag2em1Iexas Resource Report Resource Website |
RRID:RGD_38599189 | Rattus norvegicus | This strain was established by targeting Rag2 gene in F344/Jcl using CRISPR/Cas9 system. gRNA to Rag2: AACATAGCCTTAATTCAACCAGG (PAM: last AGG); Cas 9 mRNA transcribed from T7-NLS hCas9-pA (RDB13130) was used for the system. Gene transfer was performed by electroporation. This strain shows severe combined immunodeficiency (SCID) caused by 1-bp insertion in Rag2 gene on chromosome 3. This strain grows normally under SPF condition. National BioResource Project for the Rat in Japan | 38599189 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo (as of 2020-09-14) | 38599189 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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WI;WDB-Sall1tm4(tdTomato)Nips Resource Report Resource Website |
RRID:RGD_125097494 | Rattus norvegicus | Targeting vector was designed to replace 2nd and 3rd exons encoding DNA-binding domain of Sall1 locus with tdTomato. The vector was introduced into WDB/Nips-ES1/Nips (RGD ID:10054010) embryonic stem cells by electroporation.Targeted ES cells were injected into Crlj:WI blastocysts to produce chimeric rats. The chimeric rats were crossed with Crlj:WI rats to produce heterozygous founder rats..These rat strains are being maintained by crossing the founder rats with Crlj:WI rats. Homozygous Sall1 knocked-in rats had the anephric phenotype at E21.5, and died at postnatal Day-1. Section of Mammalian Transgenesis, Center for Genetic Analysis of Behavior, National Institute for Physiological Sciences, Okazaki Aichi 444-8787, JAPAN | 125097494 | mutant | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Embryo (as of 2021-04-01) | 125097494 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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WIC;WI;WDB-Kiss1tm8Nips Resource Report Resource Website |
RRID:RGD_125097497 | Rattus norvegicus | This strain was made by electroporation of WDB/Nips-ES1/Nips (RGD ID:10054010) embryonic stem (ES) cells with a targeting vector. A targeting vector was designed to insert two loxP sites encompassing exons 2 and 3 of the Kiss1 gene coding for 52-amino acid rat kisspeptin-1 (Kiss1) and a neomycin-resistance gene into the Kiss1 locus in rat ES cells via homologous recombination. Targeted ES cells were injected into Crlj:WI blastocysts to produce chimeric rats. The chimeric rats were crossed with Iar:Wistar-Imamichi rats to produce heterozygous founder rats. This rat strain is being maintained by crossing the founder rat with Iar:Wistar-Imamichi rats. | 125097497 | mutant | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Embryo (as of 2021-04-01) | 125097497 | RGD | 2026-10-17 01:54:06 | 0 | |||||
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WI-Grm2em1 Resource Report Resource Website |
RRID:RGD_41410881 | Rattus norvegicus | This mutant rat strain was produced by Transposagen Biopharmaceutical and available in mGluR2+/- breeding pairs. The genome modification created a premature stop codon insertion that causes a nonsense mutation at amino acid C407, deleting the transmembrane and intracellular domains of the receptor and rendering the gene nonfunctional. | 41410881 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 41410881 | RGD | 2026-10-17 01:54:06 | 0 | |||||
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WIC-Cspg4em3Kyst Resource Report Resource Website |
RRID:RGD_39128163 | Rattus norvegicus | By CRISPR/Cas9 system, mutation was introduced in Cspg4 gene of Wistar-Imamichi rat. 2 bp insertion on Exon1. National BioResource Project for the Rat in Japan | 39128163 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2020-09-23) | 39128163 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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SS-Vwfem2Mcwi-/- Resource Report Resource Website |
RRID:RGD_18182944 | Rattus norvegicus | CRISPR/Cas9 mediated gene editing was used to delete a 130,954bp region of the VWF gene in DahlSS/Mcw (SS/JrHsdMcwi ) rat embryos Contact MCW rat distribution at [email protected] | 18182944 | mutant | Rat Genome Database (RGD) | RGD | Live Animals (as of 2020-01-14) | 18182944 | RGD | 2026-10-17 01:54:06 | 0 | |||||
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SD-Bace1em1Sage+/- Resource Report Resource Website |
RRID:RGD_14394486 | Rattus norvegicus | The Bace1 (+/-) rats were generated by SAGE Labs using zinc-finger nuclease (ZFN) technology to create a 137-base pair deletion spanning the translation initiation start site in exon 1 of the rat Bace1 gene, corresponding to chr8:48,766,315-48,766,452 (RGSC 5.0/rn5 assembly) | 14394486 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 14394486 | RGD | 2026-10-17 01:54:06 | 0 | |||||
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SD-Ercc6em1Cgen Resource Report Resource Website |
RRID:RGD_126925978 | Rattus norvegicus | The CRISPR/Cas9 system was designed to introduce an in-frame amino acid substitution (R571X. CGA > TGA). A silent mutation (ACC to ACG) was also introduced to prevent the binding and re-cutting of the sequence by gRNA after HDR. Founder animals harboring the expected single-nucleotide substitution were bred to produce heterozygous and homozygous rats.The heterozygous rats had phenotypes similar to the wild type littermates. | 126925978 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126925978 | RGD | 2026-10-17 01:54:07 | 0 | |||||
|
LE-Grin2bem1Mcwi Resource Report Resource Website 1+ mentions |
RRID:RGD_14394515 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a mutation in the Grin2b gene of Crl:LE rat embryos. The resulting mutation is deletion of exon 3. Autism Rat Model Resource, Contact MCW rat distribution at [email protected] | 14394515 | mutant | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Sperm (as of 2025-02-20) | 14394515 | RGD | 2026-10-17 01:54:07 | 1 | |||||
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SD-Hamp em3Jfcol -/- Resource Report Resource Website 1+ mentions |
RRID:RGD_36174224 | Rattus norvegicus | Hamp KO, Sprague-Dawley rats were generated by Transposagen Biopharmaceuticals (Lexington, KY). Four different genetically engineered rat lines, each with different sized Hamp deletions (with or without concurrent insertions), were created using TALEN technology. SD-Hamp em3Jfcol -/- (RGD:36174224) is homozygous carrying a 20-bp deletion and a 3-bp insertion in exon 2 of both rat Hamp alleles. Rat Resource & Research Center (RRRC) | 36174224 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2020-07-29) | 36174224 | RGD | 2026-10-17 01:54:06 | 1 | |||||
|
SD-Hamp em4Jfcol -/- Resource Report Resource Website 1+ mentions |
RRID:RGD_36174226 | Rattus norvegicus | Hamp KO, Sprague-Dawley rats were generated by Transposagen Biopharmaceuticals (Lexington, KY). Four different genetically engineered rat lines, each with different sized Hamp deletions (with or without concurrent insertions), were created using TALEN technology. SD-Hamp em4Jfcol -/- (RGD:36174226) is homozygous carrying a 15-bp deletion in exon 2 of both rat Hamp alleles Rat Resource & Research Center (RRRC) | 36174226 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2020-07-29) | 36174226 | RGD | 2026-10-17 01:54:06 | 1 | |||||
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SD-Aqp4em1Hrt Resource Report Resource Website 1+ mentions |
RRID:RGD_127284883 | Rattus norvegicus | The transcription activator-like effector nuclease (TALEN)-mediated knockout approach was applied to generate Aqp4-deficient rats. The synthesized TALENs against the following sequences: (5′-CACAGCAGAGTTCCTGG-3′) for the sense strand and (5′-GGATCCCACGCTGAGCA-3′) for the antisense strand. The founder animal lacking three base pairs was crossed with wild-type rat to produced the F1 generration and the heterozygous offspring of F1 were corssed to produce mutant strains and confirmed by sequencing analysis of PCR products of modified genome region. | 127284883 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 127284883 | RGD | 2026-10-17 01:54:07 | 1 | |||||
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SD-Hamp em1Jfcol -/- Resource Report Resource Website 1+ mentions |
RRID:RGD_36174220 | Rattus norvegicus | Hamp KO, Sprague-Dawley rats were generated by Transposagen Biopharmaceuticals (Lexington, KY). Four different genetically engineered rat lines, each with different sized Hamp deletions (with or without concurrent insertions), were created using TALEN technology. SD-Hamp em1Jfcol -/- (RGD:36174220) is homozygous carrying the 169-bp deletion between exons 2 & 3 of both rat Hamp alleles. Rat Resource & Research Center (RRRC) | 36174220 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2020-07-29) | 36174220 | RGD | 2026-10-17 01:54:06 | 1 | |||||
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SD-Hamp em2Jfcol +/- Resource Report Resource Website 1+ mentions |
RRID:RGD_36174221 | Rattus norvegicus | Hamp KO, Sprague-Dawley rats were generated by Transposagen Biopharmaceuticals (Lexington, KY). Four different genetically engineered rat lines, each with different sized Hamp deletions (with or without concurrent insertions), were created using TALEN technology. SD-Hamp em2Jfcol +/- (RGD:36174221) is heterozygous carrying a 230-bp deletion and a 1-bp insertion between exons 2 & 3 of the rat Hamp gene. Rat Resource & Research Center (RRRC) | 36174221 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2020-07-29) | 36174221 | RGD | 2026-10-17 01:54:06 | 1 | |||||
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WI-Ahrem1Hyama+/- Resource Report Resource Website 1+ mentions |
RRID:RGD_15090817 | Rattus norvegicus | Heterozygous rats carrying a defective exon 2 in rat Ahr gene was created by injecting TALEN mRNA containing 5'-TTCTAAACGACACAGAGACCGGCTGAACACAGAGTTAGACCGCCTGGCTA-3' to embryos of JclKud:WI. | 15090817 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 15090817 | RGD | 2026-10-17 01:54:07 | 1 |
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