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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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SD-Vwfem1Mcwi-/- Resource Report Resource Website |
RRID:RGD_39128242 | Rattus norvegicus | CRISPR/Cas9 mediated gene editing resulted a 130,938-bp deletion between 32-bp in front of the 5' end of Exon 1 and 122bp after the stop codon. Contact MCW rat distribution at [email protected] | 39128242 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2020-10-09) | 39128242 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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Wpk +/- Resource Report Resource Website |
RRID:RGD_15017093 | Rattus norvegicus | The wpk mutation was first recognized in 1994 in a colony of outbred Wistar rats at Utrecht University (Utrecht, The Netherlands). In 1996, a breeding pair of test-proven heterozygotes were transferred to the University of Rotterdam (Rotterdam, The Netherlands), and a new subcolony was initiated. This colony has been maintained by brother-sister matings for more than five generations. Individuals heterozygous for the mutant allele were identified in each generation by test-crossing phenotypically normal offspring from known heterozygotes. A single C to T substitution in exon 12 was identified as the mutated allele in the Wpk rat. This mutation converts a proline to a leucine in the protein products(P394L). | 15017093 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 15017093 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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LE-Cntnap2em1Mcwi Resource Report Resource Website 1+ mentions |
RRID:RGD_25330087 | Rattus norvegicus | The rat strain was produced by injecting CRISPR/Cas9 targeting rat Cntnap2 into Crl:LE embryos. The result is a 1-bp deletion in exon 6 of the gene. Autism Rat Model Resource. Contact MCW rat distribution at [email protected] | 25330087 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 25330087 | RGD | 2026-10-17 01:54:08 | 1 | |||||
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LE-Chd8em1Mcwi Resource Report Resource Website 1+ mentions |
RRID:RGD_25330088 | Rattus norvegicus | The rat strain was produced by injecting the CRISPR/Cas9 system targeting rat Chd8 gene of Crl:LE embryos. The result is a 5-bp deletion in exon 3 of rat Chd8 gene. Autism Rat Model Resource, Contact MCW rat distribution at [email protected] | 25330088 | mutant | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Sperm (as of 2025-02-20) | 25330088 | RGD | 2026-10-17 01:54:08 | 1 | |||||
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SD-Cftrem2Apb Resource Report Resource Website |
RRID:RGD_151356959 | Rattus norvegicus | The CRISPR/Cas9 system was used to target exon 11 and create a deletion at codon F508, which was injected into Sprague-Dawley one-cell embryos (C076 line). A rat with an 8-bp deletion upstream of the TTT site (c.1514_1521delATATCATC) was used to establish the KO strain. | 151356959 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 151356959 | RGD | 2026-10-17 01:54:08 | 0 | |||||
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F344-Nppcem2Kyo Resource Report Resource Website 1+ mentions |
RRID:RGD_127284868 | Rattus norvegicus | This strain was established by injecting Zinc-finger nucleases (ZFNs) to F344/Stm pronuclear stage embryos. Selected ZFNs were designed to target exon 1 of rat Nppc, which encodes the N-terminus of natriuretic peptide precursor C (target sequence: CGAAGCCAAGCCCGGGACaccaccGAAGGTGGGTGCTGTCGCG; nucleotides 179 - 221, NC_005108.4). The injected F344/Stm embryos were transferred into the oviducts of pseudopregnant rats. Four lines of knockout strains were estaglished. This F344-Nppcem2Kyo strain ( delta 9) was deduced to generate one amino-acid substitution (a.a. 26, from Gly to Ala, NP_446202, at nucleotides 192 - 194, NM_053750.1) and a three amino-acid deletion (a.a. 27 - 29, Thr, Pro and Pro, NP_446202, at nucleotides 193 - 201, NM_053750.1), within the N-terminal portion of the full-length Nppc National BioResource Project for the Rat in Japan | 127284868 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 127284868 | RGD | 2026-10-17 01:54:07 | 1 | |||||
|
LE-Ckmtm1(cre)/Rrrc Resource Report Resource Website |
RRID:RGD_151667414 | Rattus norvegicus | This model expresses cre-recombinase under the control of the endogenous Ckm (creatine kinase, M-type) promoter. Cre was targeted to the rat Ckm gene of LE embryos through CRISP/Cas9 system genome editing system. This strain will be deposited with RRRC Rat Resource and Research Center | 151667414 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 151667414 | RGD | 2026-10-17 01:54:08 | 0 | |||||
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BN-Themism1Adej Resource Report Resource Website |
RRID:RGD_38599155 | Rattus norvegicus | This autosomal recessive mutation occurred spontaneously in a Brown-Norway rat colony and was identified as causing marked T cell lymphopenia. The mutation was identified as a frameshift mutation caused by a four-nucleotide insertion in the Themis gene, leading to its disruption. | 38599155 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 38599155 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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SD-Pon1em1Lizh Resource Report Resource Website |
RRID:RGD_45073133 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a 342-bp deletion in exon 4 of rat PON1 gene in Sprague- Dawley embryos. The destruction of Pon1 gene caused the absence of the the expression of Pon1 mRNA, protein in liver, spleen and thymus in the Pon1 homozygous knock-out rat. | 45073133 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 45073133 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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WI- Msh6m1Hubr Resource Report Resource Website |
RRID:RGD_126848737 | Rattus norvegicus | The Msh6 knockout mutant rat line was generated by target-selected ENU-driven mutagenesis on Crl:WI rats. The founder rat carried an ENU-induced premature stop codon in exon 4 of the Msh6 gene was bred to obtain homozygous animals. | 126848737 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126848737 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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SS-Tgfb1em3Mcwi+/+ Resource Report Resource Website |
RRID:RGD_150340629 | Rattus norvegicus | ZFN mutant founders were backcrossed with SS/JrHsdMcwi to get heterozygous offsprings which were intercrossed to produce homozygous wild type and heterozygous mutant littermates. | 150340629 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150340629 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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SD-Slc9a6 em1Moro Resource Report Resource Website |
RRID:RGD_151664748 | Rattus norvegicus | CRISPR/Cas9 system was used to generate this mutant. Guide RNA sequence is the following: 5'-CGGCTGTGTAACCCTGATGA-3'. Cas9-mediated cleavage at exon 7 in the Slc9a6 locus resulted in the insertion of 2 bp (TT) generating frameshift and a premature stop codon. | 151664748 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 151664748 | RGD | 2026-10-17 01:54:08 | 0 | |||||
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W-Mkxem1Asah Resource Report Resource Website |
RRID:RGD_126777684 | Rattus norvegicus | The CRISPR/Cas9 genome editing system targeting exon 2 of rat Mkx gene was injected to the Wistar embryo to generate this knock out rat strain with 14- bp deletion causing frameshift mutation in the gene. | 126777684 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126777684 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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SD-Ube3aem1Jue Resource Report Resource Website |
RRID:RGD_126790464 | Rattus norvegicus | The CRISPR/Cas9 genome editing system was injected into fertilized Sprague-Dawley rat embryos and inserted into a surrogate. Two genomic RNAs (gRNAs) were designed to target the 5ʹ-end of the Ube3a gene (upstream of the Ube3a coding sequence) and two gRNAs target sequences downstream of Ube3a. gRNA pairs were used on each end of the deletion to maximize the probability of a complete deletion of the 90-kb region encompassing the Ube3a gene. The 90 kb deletion in Ube3a was confirmed by genome sequencing. Only pups with maternal inheritance of the deletion carried traits for model of Angleman Syndrome. | 126790464 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126790464 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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SD-Tshrem1Mlit Resource Report Resource Website |
RRID:RGD_150521599 | Rattus norvegicus | CRISPR/Cas9 system targeting exon 10 of the rat Tshr gene was injected into Sprague Dawley embryos to create this mutant strain. The strain was homozygous with 5 bp deletion (CACGC) which introduces frameshift at residue 449 and a stop codon at 478 (P449fsX478). | 150521599 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150521599 | RGD | 2026-10-17 01:54:08 | 0 | |||||
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SD-Nkx3-1em1Pjhak-/- Resource Report Resource Website |
RRID:RGD_150573818 | Rattus norvegicus | A pair of TALENs targeting coding region of rat Nkx3-1gene was electroporated into SD zygotes to create NKx3-1 mutants. The resulting mutation was indel mutation with sequences loss beyond TALEN recognition resulting a premature termination codon of the protein. | 150573818 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150573818 | RGD | 2026-10-17 01:54:08 | 0 | |||||
|
F344-Angptl8em1Kyo-/- Resource Report Resource Website |
RRID:RGD_127345123 | Rattus norvegicus | This line #1 Angptl8 knock out (KO) rats were generated using the CRISPR/Cas9 system containing two guide RNAs (gRNAs) targeting exons 2 and 3 in the rat Angptl8 gene. A mixture of transcribed Cas9 and gRNAs was microinjected into F344/Stm rat zygotes [National BioResource Project rat number: 0140) provided by the National BioResource Project for the Rat in Japan. Two lines of rats heterozygous for Angptl8 (lines #1 and #2). Male and female Het rats were intercrossed to obtain homozygous Angptl8 KO rats. Rats were genotyped by PCR with the following primers, 5'-CATCTGTTGAGCAGGCAGAA-3' (sense) and 5'-GTTCAGTGGTGGCTTCCTTC-3' (antisense) for line #1. A 7-bp deletion mutation was identified in line #1. National BioResource Project for the Rat in Japan | 127345123 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 127345123 | RGD | 2026-10-17 01:54:07 | 0 | |||||
|
F344-Angptl8em1Kyo+/- Resource Report Resource Website |
RRID:RGD_127345124 | Rattus norvegicus | This line #1 Angptl8 heterozygous rats were generated using the CRISPR/Cas9 system containing two guide RNAs (gRNAs) targeting exons 2 and 3 in the rat Angptl8 gene. A mixture of transcribed Cas9 and gRNAs was microinjected into F344/Stm rat zygotes [National BioResource Project rat number: 0140) provided by the National BioResource Project for the Rat in Japan. Two lines of rats heterozygous for Angptl8 (lines #1 and #2). Male and female Het rats were intercrossed to obtain homozygous Angptl8 KO rats. Rats were genotyped by PCR with the following primers, 5'-CATCTGTTGAGCAGGCAGAA-3'(sense) and 5'-GTTCAGTGGTGGCTTCCTTC-3' (antisense) for line #1. A 7-bp deletion mutation was identified in line #1. National BioResource Project for the Rat in Japan | 127345124 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 127345124 | RGD | 2026-10-17 01:54:07 | 0 | |||||
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SD-Gnalem1Hpng+/+ Resource Report Resource Website |
RRID:RGD_150429815 | Rattus norvegicus | The homozygous wild type Gnal rats were littermates of SD-Gnalem1Hpng+/- (RGD:150429814) created by CRISPR/Cas9. The heterozygous mutants carried one copy of mutated allele contained a 13- bp deletion in exon1 that corresponded to position 34 to 46 downstream of the translation start point ATG of theGnal splicing variant 2 was detected resulting in an early stop at position150 and producing a truncated protein with 50 amino acids . | 150429815 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150429815 | RGD | 2026-10-17 01:54:08 | 0 | |||||
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HHSE/Hat Resource Report Resource Website |
RRID:RGD_38676463 | Rattus norvegicus | HHSE/Hat was derived from Hirosaki hairless rat (HHR) and Hirosaki small-eye rat (HiSER), which are Sprague-Dawley rat (SDR)mutant lines. HHR was established in 1984 as a spontaneous mutant of SDR that has been inbred in Department of Biochemistry and Genome Biology Hirosaki University Graduate School of Medicine. Whole body shows hypotrichosis, abnormal differentiation of thymus, and regressed mammary gland in females. These mutations are autosomal recessive and are suggested to be due to deletion of the keratin gene cluster and the lectin-like receptor gene Ly49s3. HiSER was established in 2013 as a spontaneous mutant of Sprague-Dawley rat maintained in our course in the same way as HHR/Hat. This mutant strain has retinal detachment and the disease is progressively exacerbated. The muation is autosomal recessive and is suggested to be due to deletion of the crystallin gene Cryba1. The mutations in HHR and HiSER are on different chromosomes and do not affect each other. The mutations in HHR and HiSER are on different chromosomes and do not affect each other. National BioResource Project for the Rat in Japan ;Depart of Biochemistry and Genome Biology, Hirosaki Univer-sity School of Medicine | 38676463 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo; Cryopreserved Sperm (as of 2020-09-18) | 38676463 | RGD | 2026-10-17 01:54:08 | 0 |
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