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URL: http://www.nitrc.org/projects/ccsegthickness
Proper Citation: Corpus Callosum Thickness Profile Analysis Pipeline (RRID:SCR_003575)
Description: An end-to-end pipeline for corpus callosum processing that provides automated midsagittal alignment, CC segmentation with a quality control tool, and thickness profile generation. Groupwise analysis is facilitated by permutation testing with FWER and FDR multiple comparison correction. Results display is facilitated by a display script that shows p-values on a 3D pipe representation of a CC. This pipeline is implemented in MATLAB and requires the Image Processing Toolbox. There are plans to implement it completely in Python.
Abbreviations: ccsegthickness
Resource Type: software resource
Defining Citation: PMID:24968872
Keywords: linux, matlab, mr, nifti-1, posix/unix-like, corpus callosum
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