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Resource Name

NeuroImaging Tools and Resources Collaboratory (NITRC)

RRID:SCR_003430 RRID Copied

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NeuroImaging Tools and Resources Collaboratory (NITRC) (RRID:SCR_003430)

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Resource Information

URL: http://www.nitrc.org/

Proper Citation: NeuroImaging Tools and Resources Collaboratory (NITRC) (RRID:SCR_003430)

Description: Software repository for comparing structural (MRI) and functional neuroimaging (fMRI, PET, EEG, MEG) software tools and resources. NITRC collects and points to standardized information about structural or functional neuroimaging tool or resource.

Abbreviations: NITRC

Synonyms: Neuroimaging Informatics Tools and Resources Clearinghouse, , NeuroImaging Tools and Resources Collaboratory, Neuroimaging Informatics Tools Resources Clearinghouse, NITRC - Neuroimaging Informatics Tools and Resources Clearinghouse, NITRC - Neuroimaging Informatics Tools Resources Clearinghouse

Resource Type: portal, software repository, community building portal, data repository, data or information resource, service resource, storage service resource, software resource

Defining Citation: PMID:26044860, PMID:18999128

Keywords: collaboration, information, resource, structural, functional, neuroimaging, MRI, fMRI, EEG, MEG, PET

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Funding: NIH Blueprint for Neuroscience Research ; NIMH ; NIDA ; NIBIB U24 EB023398; NINDS R44 NS074540

Availability: Free, Freely available, Registration suggested

Resource Name: NeuroImaging Tools and Resources Collaboratory (NITRC)

Resource ID: SCR_003430

Alternate IDs: nif-0000-00202

Record Creation Time: 2022-01-29 12:02:18

Record Last Update: 2025-04-02 11:02:49

This resource

is used by	NIF Data Federation
is used by	Consortium for Reliability and Reproducibility
is used by	DataLad
is recommended by	National Library of Medicine
lists	Dipy
lists	3DMeshMetric
lists	MPScope
lists	VectorValuedHistogramNormalizer
lists	Faceted Search Based Ontology Visualizer
lists	Morphometry BIRN
lists	Colin 3T/7T High-resolution Atlas
lists	CMFreg
lists	BrainFX
lists	dinifti
lists	Center for Computational Biology at UCLA
lists	Convert MNI coordinates to or from XYZ
lists	Licensing issues in software and data
lists	Local Binary Pattern Analysis Tools for MR Brain Images
lists	MIView
lists	uManager
lists	Penn Hippocampus Atlas
lists	RapidArt
lists	Scribe
lists	ShapeWorks
lists	Vervet Probabilistic Atlas
lists	Talairach Daemon
lists	ADHD-200 Preprocessed Data
lists	LORIS - Longitudinal Online Research and Imaging System
lists	NVM
lists	Maps4Mipav (Exploratory JIST)
lists	Autism Tissue Program
lists	MEG Tools
lists	PyNIfTI
lists	LONI Visualization Tool
lists	Mind Research Network - COINS
lists	OpenElectrophy
lists	CIFTI Connectivity File Format
lists	3DSlicerLupusLesionModule
lists	BrainNetworkConstructionAnalysisPlatform
lists	COMPARE
lists	Data Format Tools
lists	GesTr
lists	I/OWA
lists	MINC Example files
lists	cbiNifti: Matlab/Octave Nifti library
lists	BRAINSCut
lists	C-PAC
lists	Connectir
lists	DicomBrowser
lists	Hitachi Optical Topography System
lists	Net Station API
lists	imcalc: SPM batch image calculator
lists	BRAINSCortex
lists	Insight Segmentation and Registration Toolkit
lists	LONI Debabeler
lists	LONI Pipeline Processing Environment
lists	NiLearn
lists	MRI Studio
lists	BraVa
lists	Brede Wiki
lists	Center for Functional Neuroimaging Technologies
lists	Philips Users Community
lists	medInria
lists	Beijing: Eyes Open Eyes Closed Study
lists	vIST/e
lists	Camino
lists	Diffusion Tensor Imaging ToolKit
lists	TORTOISE
lists	NIDAG: Neuroimaging Data Access Group
lists	MRI CVPR
lists	vuTools
lists	Medical Image Processing and Visualization in Virtual Environments
lists	Brainstorm
lists	Atlas3D
lists	FMRISTAT - A general statistical analysis for fMRI data
lists	FreeSurfer
lists	Rosetta Bit
lists	Laboratory of Neuro Imaging
lists	Group ICA of fMRI Toolbox
lists	Hierarchical Attribute Matching Mechanism for Elastic Registration
lists	Internet Brain Segmentation Repository
lists	Neural ElectroMagnetic Ontologies (NEMO) Project
lists	Wavelet-based Image Fusion
lists	ITK-SNAP
lists	Internet Brain Volume Database
lists	Statistical non-Parametric Mapping
lists	VoxBo
lists	NITRC Computational Environment
lists	Spatially Constrained Parcellation
lists	Cluster reporter
lists	Cluster Extent Correction
lists	4D Atlases Construction
lists	CIGAL
lists	CleanLine
lists	Computational Morphometry Toolkit
lists	Cognitive Paradigm Ontology
lists	aBEAT
lists	MR Connectome Automated Pipeline
lists	International Neuroinformatics Coordinating Facility
lists	Functional Regression Analysis of DTI Tract Statistics
lists	MCIC
lists	MGDM: Multi Geometric Deformable Model
lists	MIAS Registration Toolkit
lists	Medical Image Visualization and Analysis
lists	Microstructural correlation toolbox
lists	MisterI
lists	MriWatcher
lists	Multiple Correlation Function Tool
lists	NITRC Community Conferences Workshops and Meetings
lists	BRAINSFit
lists	INCF Software Center
lists	BrainVision Analyzer
lists	COGNISION
lists	DPARSF
lists	GLIRT
lists	MINC
lists	Group Level Imputation of Statistic Maps
lists	MRIcron
lists	Inter-Group Registration Toolbox
lists	MCML and CONV
lists	MEGSIM
lists	MIRIAD
lists	MRI Defacer
lists	MS lesion segmentation challenge 2008
lists	Measure Projection Toolbox
lists	Mindboggle
lists	Mindboggle-101 atlases
lists	ModelGUI
lists	Multi-Modal MRI Reproducibility Resource
lists	MultiTracer
lists	Multicomponent T2 estimation with stimulated echo correction
lists	NCANDA: Data Integration Component
lists	NFT
lists	Net Station EEG Software
lists	Network Based Statistic Toolbox
lists	NeuroScope
lists	Numerical Fibre Generator
lists	PST MRI Simulator
lists	cortex
lists	iBEAT
lists	M3
lists	Group ICA Of EEG Toolbox
lists	4D-PARSeR Pathological Anatomy Regression via Segmentation and Registration
lists	Automatic Segmentation Tool Adapter
lists	DTI-TEMPLATE-RHESUS-MACAQUES
lists	LONI Provenance Editor
lists	MNI N3
lists	MRI Digital Projection System
lists	NIDB - Neuroinformatics Database
lists	NIPY
lists	NIRAL Utilities
lists	NIRx NIRS Neuroimaging
lists	NIRx2nirs: A NIRx to .nirs data converter
lists	NITRC Enhanced Services
lists	NITRC GForge Extensions
lists	NPTK
lists	NeuroImaging Analysis Kit (NIAK)
lists	NiBabel
lists	NiftyRec
lists	Nipype
lists	Nirfast
lists	Nitime
lists	Non-Rigid Image Registration Evaluation Project
lists	Normative Independent Component Analysis
lists	OEI fMRI compatible olfactometer
lists	ORS Visual SI
lists	OpenMEEG
lists	PANDA
lists	PESTICA fMRI Physio Detection/Correction
lists	PHYCAA+: adaptive physiological noise correction for BOLD fMRI
lists	ParaView
lists	Parkinson’s Disease Biomarkers Program Data Management Resource (PDBP DMR)
lists	Presentation
lists	PySurfer
lists	Pythagorean Displacement and Motion Regressors
lists	Quantitative Diffusion Tools
lists	R-package for adaptive DWI analysis
lists	R-package for adaptive fMRI analysis
lists	REX
lists	RFT FDR
lists	ROBEX
lists	RT Image
lists	Resource Ontology Discussion Group
lists	Rodent Brain Extraction Tool
lists	Rodent Cortical Thickness Analysis
lists	S-rep Fitting Statistics and Segmentation
lists	SCIRun
lists	SCRalyze
lists	SOCK
lists	SPHARM-MAT
lists	SPHARM-PDM Toolbox
lists	SRI24 Atlas: Normal Adult Brain Anatomy
lists	Seg3D
lists	ShapeComplexAtlas
lists	Signed Differential Mapping
lists	Sleuth
lists	Slice:Drop
lists	Slicer3 Example Modules
lists	Source Information Flow Toolbox
lists	Spanish Resting State Network
lists	Spatial Analysis 3D
lists	Stereoscopic Atlas of Intrinsic Brain Networks
lists	UNC Infant 0-1-2 Atlases
lists	UNC Primate Brain Atlas
lists	XCEDE Schema
lists	peak nii
lists	pydicom
lists	pyxnat
lists	scikit-learn
lists	shapeAnalysisMANCOVA - SPHARM tools
lists	VMTK in 3D Slicer
lists	3D Interactive Chemical Shift Imaging
lists	BRAINSSurfaceStats
lists	Brain lesion segmentation tool using SVM
lists	Diffusion Tractography with Kalman Filter
lists	Fast Nonlocal Means for MRI denoising
lists	Monte Carlo Simulation Software: tMCimg
lists	Web Interfaces for Multiscale Images
lists	STAPLE
lists	Segmentation Validation Engine
lists	Spatial Statistical Parametric Mapping
lists	SpineSegmentation module for 3DSlicer
lists	Stochastic Tractography System
lists	Subject Library
lists	TAPIR
lists	TARQUIN
lists	Template Image Processing Library
lists	TetraMetrix
lists	TractoR: Tractography with R
lists	Triangle BioSystems
lists	TumorSim
lists	TurtleSeg
lists	UNC Human Brain Atlas
lists	VR Worlds 2
lists	Vaa3D
lists	ValMap: simple statistical mapping tool
lists	WFU Biological Parametric Mapping Toolbox
lists	WFU Pipeline
lists	Working Memory Trainer
lists	vis: SPM Visualized Statistics toolbox
lists	Synchronized Histological Image Viewing Architecture
lists	LONI ShapeViewer
lists	LONI ShapeTools
lists	FFT Library
lists	Automated recognition of brain region mentions in neuroscience literature.
lists	NUTMEG
lists	Cognitive Atlas
lists	Mouse BIRN Atlasing Toolkit
lists	Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat
lists	FSL
lists	LEAD-DBS
lists	Brainscape
lists	EONS
lists	BioImage Suite
lists	ADNI - Alzheimer's Disease Neuroimaging Initiative
lists	MindSeer
lists	XNAT - The Extensible Neuroimaging Archive Toolkit
lists	brainmap.org
lists	ImageJ
lists	Neuroimaging Informatics Technology Initiative
lists	IMOD
lists	Statistics Online Computational Resource
lists	signalml.org
lists	Mouse Biomedical Informatics Research Network
lists	NIH MRI Study of Normal Brain Development
lists	MGH-USC Human Connectome Project
lists	Fusion ICA Toolbox
lists	Corpus Callosum Thickness Profile Analysis Pipeline
lists	ABIDE
lists	Mouse Connectome Project
lists	NITRC-IR
lists	Open Connectome Project
lists	neurodebian
lists	NIMH Data Archive
lists	ANTS - Advanced Normalization ToolS
lists	XNAT Extras
lists	TrackVis
lists	Brain Connectivity Toolbox
lists	FieldTrip
lists	LONI Inspector
lists	BrainLiner
lists	OpenNeuro
lists	Biomedical Informatics Research Network
lists	McConnell Brain Imaging Center MNI Macaque Atlas
lists	SINOMO
lists	DONE: Detection of Outlier NEurons
lists	Neuro Bureau
lists	ADHD-200 Sample
lists	1000 Functional Connectomes Project
lists	PubBrain
lists	CBRAIN
lists	ENIGMA: Enhancing Neuro Imaging Genetics Through Meta-Analysis
lists	Bisque
lists	3D Slicer
lists	Internet Analysis Tools Registry
lists	Neuromorphometrics
lists	Analysis of Functional NeuroImages
lists	Automated Image Registration
lists	BASH4RfMRI
lists	MNE software
lists	Object-Oriented Development Interface for NMR
lists	NYU CSC TestRetest
lists	Optseq - fMRI Event Scheduler
lists	TOADS-CRUISE Brain Segmentation Tools
lists	MouseTracker
lists	Hammer And WML Modules for 3D Slicer
lists	ABC (Atlas Based Classification)
lists	Allen Brain Atlas API
lists	Viking Viewer for Connectomics
lists	ARCTIC
lists	ArtRepair for robust fMRI
lists	Automatic Registration Toolbox
lists	Artifact Detection Tools
lists	Segmentation of Hippocampus Subfields
lists	ASL data processing tool box
lists	Bioelectromagnetism Matlab Toolbox
lists	PyMVPA
lists	Human Imaging Database
lists	BrainImage Software
lists	Brede Toolbox
lists	Computerized Anatomical Reconstruction and Editing Toolkit
lists	BrainColor: Collaborative Open Labeling Online Resource
lists	Registry Builder Data Harmonization and Aggregation Tool
lists	PsychoPy
lists	NiftySim
lists	NiftyReg
lists	Neurobiological Image Management System
lists	BRAINSTools
lists	MeshValmet: Validation Metric for Meshes
lists	BrainSuite
lists	DW-MRI Random Walk Simulator
lists	Web Game for Collaborative Labeling
lists	BrainVoyager Brain Tutor
lists	POLGUI - Matlab Polhemus Interface
lists	BrainVoyager Brain Viewer
lists	NeuroPub Visualizer
lists	NODDI Matlab Toolbox
lists	MITK Diffusion
lists	Federal Interagency Traumatic Brain Injury Research Informatics System
lists	BrainMaps.org
lists	PRoNTo
lists	Scalable Brain Atlas
lists	NIH Human Connectome Project
lists	Mesh-based Monte Carlo (MMC)
lists	Matlab Neuroshare Library
lists	MRtrix
lists	MABMIS: Multi-Atlas Based Multi-Image Segmentation
lists	Monte Carlo eXtreme
lists	Whole Brain Catalog
lists	BCILAB
lists	ABSORB: Atlas Building by Self-Organized Registration and Bundling
lists	VAMCA
lists	SPM
lists	Low Resolution Electromagnetic Tomography
lists	SurfStat
lists	Cambridge Brain Activation
lists	CLEAVE
lists	CoCoMac
lists	fMRI Data Center
lists	Function BIRN
lists	EEGLAB
lists	BrainVISA / Anatomist
lists	MIPAV: Medical Image Processing and Visualization
lists	NeuroLens
lists	WFU PickAtlas
lists	Open Access Series of Imaging Studies
lists	BioSig: An Imaging Bioinformatics System for Phenotypic Analysis
lists	xjView: A Viewing Program For SPM
lists	Human Connectome Coordination Facility
lists	ASL spm8
lists	Integrated Manually Extracted Annotation
lists	JIST: Java Image Science Toolkit
lists	Functional Analysis of Diffusion Tensor
lists	AHEAD
lists	ANTsR
lists	3DBar
lists	Cancer Imaging Archive (TCIA)
lists	Pediatric Imaging Neurocognition and Genetics
lists	Atlasing of the basal ganglia
lists	cmrep
lists	3D DTI Atlas of the Rat Brain In Postnatal Day 5 14 and Adulthood
lists	AutoSeg
lists	BXH/XCEDE Tools
lists	Baby Brain Toolkit
lists	Best Practices for Software Development
lists	Brain Catalogue
lists	Draw3D and Meshinator
lists	Brain Segmentation Testing Protocol
lists	BrainNet Viewer
lists	BrainSolution
lists	Brainvox
lists	C8: Corpus Callosum Computations
lists	CAMINO-TRACKVIS
lists	CANDI Share: Schizophrenia Bulletin 2008
lists	CBS High-Res Brain Processing Tools
lists	CCSeg - Corpus Callosum Segmentation
lists	Cerebral Blood Flow Database and Analysis Pipeline
lists	Create DWI Atlas
lists	DFBIdb
lists	DIAMOND
lists	DICOM UploadGUI
lists	DOTS WM tract segmentation
lists	DTI Fiber Tract Statistics
lists	DW-MRI registration in FSL
lists	DbGaP Cleaner
lists	DentalTools
lists	Diffusion MRI - In-vivo and Phantom Data
lists	Diffusion MRI at DKFZ Heidelberg
lists	Diffusion Warp
lists	Disease State Prediction
lists	EEG human categorization data
lists	Epsilon Radial Networks
lists	FBIRN Image Processing Scripts
lists	FSL extensions
lists	False Discovery Rate Weighted
lists	Fiber Tracking Tool
lists	Fiber-tracking based on Finsler distance
lists	FiberViewerLight
lists	Finsler tractography module for Slicer
lists	Fluid Registration and Atlas Toolkit
lists	Framework for Open Programmatic Access
lists	Functional Connectivity Community
lists	Functional ROI Atlas
lists	Functional and Structural Neuroimaging Journals Listing
lists	GAMBIT
lists	GAMMA
lists	BRAINSMush
lists	GPU based affine registration
lists	GRETNA
lists	Generalized Covariance Analysis
lists	Generalized PPI Toolbox
lists	Group Information Guided ICA
lists	Groupwise Image Registration Toolbox
lists	HD Neuro-Informatics
lists	Hitachi2nirs
lists	IDeA Lab brain image processing suite
lists	INCF Neuroimaging Data Sharing
lists	INIA19 Primate Brain Atlas
lists	JHU Proj. in Applied Medical Imaging
lists	JIST Resources for Algorithm Development
lists	BRAINSROIAuto
lists	Joint Anisotropic LMMSE Filter for Stationary Rician noise removal in DWI
lists	Landman NeuroImaging Tools
lists	Local Label Learning Segmentation
lists	MASI Label Fusion
lists	MASIMatlab
lists	MATLAB Tutorial on Diffusion Tensor MRI
lists	Multi-Echo Independent Component Regression Group-Level Connectivity Dataset
lists	Multi-fiber Reconstruction from DW-MRI
lists	NITRC Books
lists	Network Modification Tool Lite
lists	Non-rigid groupwise registration method
lists	Rockland Download Link Script
lists	Subject Order-Independent Group ICA
lists	Task Independent Fluctuations Discussion
lists	UNC Human DTI Brain Atlas
lists	BRAINSTestData
lists	cPPI Toolbox for fMRI
lists	fMRI Classification in R
lists	fMRI-CPCA
lists	fNIRS Data Analysis Environment
lists	factory t1 dti
lists	BRAINSDemonWarp
lists	AMILab
lists	ADJUST
lists	ALVIN
lists	Age Related Atrophy Dataset
lists	B0 and eddy current correction for DTI
lists	BESA
lists	BSMac
lists	BVQXtools
lists	BioMesh3D
lists	BrainBrowser
lists	BrainGraph Editor
lists	BrainMagix SPM Viewer
lists	BrainMask Volume Processing Tool
lists	Brainsight
lists	Brainwaver
lists	CANDI Neuroimaging Access Point
lists	CBFBIRN
lists	CDF-HC PointSetReg
lists	GIMIAS
lists	CURRY
lists	CalaTK
lists	CoCoMac-Paxinos3D viewer
lists	INVIZIAN
lists	CONN
lists	Connectome File Format
lists	Connectome Viewer
lists	Cytoseg
lists	DICCCOL predictor
lists	DRAMMS
lists	DSI Studio
lists	Level-set Segmentation for Slicer3
lists	DTI BrainImageScope
lists	DTI-Reg
lists	DTIProcess ToolKit
lists	DWI/DTI Quality Control Tool: DTIPrep
lists	Diffusional Kurtosis Estimator
lists	Distributome
lists	ImageVis3D
lists	E-Prime
lists	E-Prime Extensions for fMRI
lists	EEGVIS
lists	EEProbe
lists	EMSE Suite
lists	LONI Brain Parser
lists	EPILAB
lists	ERPLAB
lists	FIV
lists	FMRIpower
lists	Fiber Optic Button Response System
lists	Free-D
lists	GIFTI
lists	GMAC: A Matlab toolbox for spectral Granger causality analysis of fMRI data
lists	HAMMER Suite
lists	HERMES
lists	HI-SPEED Software Packets
lists	Homer2
lists	IIT Human Brain Atlas
lists	JIP Analysis Toolkit
lists	Jim
lists	LDDMM
lists	LIBEEP
lists	LIMO EEG
lists	LONI De-identification Debablet
lists	Waxholm Space
lists	Lipsia
lists	Lumina LP- 400 Response System
lists	MRI Dataset for Hippocampus Segmentation
lists	MaCH-Admix
lists	Mach2dat
lists	Mag Design and Engineering
lists	MagPro Magnetic Stimulator
lists	SR Research EyeLink Eye Trackers
lists	Mango
lists	Manually Labeled MRI Brain Scan Database
lists	MarsBaR region of interest toolbox for SPM
lists	MazeSuite
lists	MoTrak Head Motion Tracking System
lists	NCIGT Fast Imaging Library
lists	NeuroWeb - NeuroImaging Database
lists	Neuroimaging Made Easy Blog
lists	Neurophysiological Biomarker Toolbox
lists	SVV
lists	Slicer3 Module Rician noise filter
lists	UNC/Utah NAMIC DTI Fiber Analysis Framework
lists	caGWAS
lists	eConnectome
lists	elastix
lists	fMRI Artefact rejection and Sleep Scoring Toolbox
lists	MACH
lists	fMRI Grocer
lists	fNIR Devices
lists	fanDTasia Java Applet: DT-MRI Processing
lists	g.BSanalyze
lists	iTools
lists	iView X MRI-LR - Eye Tracking for fMRI
lists	map3d
lists	NICE-SIGN
lists	NIRS-SPM
lists	NITRC Community
lists	NordicNeuroLab
lists	PICSL Multi-Atlas Segmentation Tool
lists	Paradigm
lists	Pipeline Neuroimaging VirtualEnvironment
lists	Pipeline System for Octave and Matlab
lists	ProbabilisticBiasCorrection
lists	Program for optimal design of blocked fMRI experiments
lists	QCQP
lists	REST: a toolkit for resting-state fMRI
lists	Robust Biological Parametric Mapping
lists	SPM SS - fMRI functional localizers
lists	Solar Eclipse Imaging Genetics tools
lists	VIEWPixx /3D
lists	resting-state pediatric imaging template
lists	DATAPixx
lists	GTRACT
lists	Wisconsin White Matter Hyperintensities Segmentation Toolbox
lists	COBRE
lists	AngioCalc Cerebral Aneurysm Calculator
lists	USC Multimodal Connectivity Database
lists	BRAINSConstellationDetector
lists	ASA - Advanced Source Analysis
lists	BRAINSTracer
lists	EYE-EEG (combined eye-tracking & EEG)
lists	BrainVoyager
lists	Mean Machine
lists	ERP PCA Toolkit
lists	LiverSegm
lists	GSA-SNP
lists	FastICA
lists	DTI Atlas Builder
lists	Neuroimaging in Python
lists	Brain Decoder Toolbox
lists	iso2mesh
lists	CUDA-SPHERE-FWD-MEEG
lists	BrainCSI
lists	BrainVisa Morphology extensions
lists	VIEWPixx
lists	PROPixx
lists	GenGen
lists	MACH 1.0
lists	PennCNV
lists	SumsDB
lists	Integrated Software
lists	NeuroLex
lists	Parkinson's Progression Markers Initiative
lists	NeuroSynth
lists	Textpresso
lists	ANNOVAR
lists	Graphtools
lists	Grantees Meeting for NITRC
lists	FP-CIT SPECT brain template in MNI space
lists	Brain Computer Interface 2000 Software Package
lists	BEAST
lists	Brian Simulator
lists	Connectome Workbench
lists	ConnectomeDB
lists	DIAN - Dominantly Inherited Alzheimer Network
lists	NKI-RS Enhanced Sample
lists	EPILEPSIE database
lists	GEneral NEural SImulation System: The Neurospaces Project
lists	Hippocampome.org
lists	Kitware
lists	Kymata Atlas
lists	L-Measure
lists	MDR
lists	neuroConstruct
lists	Neurolucida
lists	NeuroMorpho.Org
lists	NEURON
lists	NeuronJ: An ImageJ Plugin for Neurite Tracing and Quantification
lists	NeuroVault
lists	National Institute on Aging Genetics of Alzheimer’s Disease Data Storage Site (NIAGADS)
lists	NINDS Repository
lists	NKI/Rockland Sample
lists	ODIN
lists	OBART
lists	Open Science Framework
lists	PLINK
lists	Stereo Investigator
lists	studyforrest.org
lists	Virtual brain
lists	TREES toolbox
lists	APERTURE
lists	3dsvm
lists	7T Structural MRI scans ATAG
lists	Atlases of amygdala and hippocampus for pediatric populations
lists	BetA-Series COrrelation
lists	bic-mni-models
lists	BiofilmQuant
lists	Biomag Discussion Group on Yahoo
lists	Brain Entropy in space and time (BEst)
lists	Brainnetome Atlas Viewer
lists	Brainnetome fMRI toolkit
lists	BROCCOLI
lists	C-MIND Database
lists	CARLsim: a GPU-accelerated SNN Simulator
lists	Clinical Toolbox for SPM
lists	CMIND PY
lists	COST
lists	dcm2nii
lists	DICOMConvert
lists	Displacement Field Viewer
lists	DTI denoising
lists	Efficient Longitudinal Upload of Depression in the Elderly (ELUDE)
lists	Efficient Permutation Testing
lists	DTI-TK
lists	ERPwavelab
lists	ExPosition Packages
lists	Fast T2 relaxation data analysis with stimulated echo correction and non-local spatial regularisation
lists	Forward: Accurate finite element electromagnetic head models
lists	freesurfR
lists	Functional Connectivity Analysis Tool for near-infrared spectroscopy data
lists	GazeReader
lists	gCCA
lists	Generation R Pediatric MRI Resources
lists	GIMME
lists	GLMdenoise: a fast, automated technique for denoising task-based fMRI data
lists	GraphVar: A toolbox for comprehensive graph analyses of functional brain connectivity
lists	HAMMER: Deformable Registration
lists	HBM Hackathon
lists	HDBIG
lists	High-quality diffusion-weighted imaging of Parkinsons disease
lists	MGA - Multimodal Glioma Analysis
lists	Image Synthesis Tools
lists	Imeka Tractography Service
lists	International Imaging Genetics Conference
lists	Intrinsic Unscented Kalman Filter (IUKF) Tractography Software v1.0
lists	Iterative dual-regression with sparse prior
lists	Joint Anisotropic LMMSE Filter for Stationary Rician noise removal in DWI
lists	KWScene: MRML-based Atlas and Scene Builder/Reader/Writer
lists	L-Neuron
lists	Laplace Beltrami Filter on QuadEdge Meshes
lists	libSBML
lists	Lightweight Data Pipeline
lists	Longitudinal MS Lesion Imaging Archive
lists	MARS (Multi-Atlas Robust Segmentation)
lists	minc-toolkit
lists	minc-toolkit-testsuite
lists	MISST - Microstructure Imaging Sequence Simulation ToolBox
lists	MRI Neuroanatomy Labeling Services
lists	MRIcroS
lists	Multivariate General Linear Models (MGLM) on Riemannian Manifolds
lists	Neoseg
lists	NeoSegPipeline
lists	NeuriteTracer
lists	NeuroElf
lists	Neuron-C
lists	NIH Pediatric MRI Data Repository
lists	NIH-CIDI Lung Segmentation Tool
lists	NiiStat
lists	Northwestern University Schizophrenia Data and Software Tool (NUSDAST)
lists	Notion ResearchPACS
lists	NTU-DSI-122: a DSI template in ICBM-152 space
lists	OpenViBE
lists	OpenWalnut
lists	Orientation Distribution Function in Constant Solid Angle (CSA-ODF)
lists	Parkinsons Disease Discovery Database
lists	Prediction and Diagnosis for Depression and Schizophrenia
lists	Preprocessed Connectomes Project
lists	Principal Components Analysis of Scalar, Vector, and Mesh Vertex Data
lists	Ruby NIfTI
lists	SCORE
lists	SFMProject
lists	ShapePopulationViewer
lists	Simulated DW-MRI Brain Data Sets for Quantitative Evaluation of Estimated Fiber Orientations
lists	SPIKECOR: fMRI tool for automated correction of head motion spikes
lists	Spinal Cord Toolbox
lists	Stark Cross-Sectional Aging
lists	Brain Coactivation Map
lists	Multiscale Object Orientation Simulation Environment
lists	Striatal Subregional VOImap
lists	Topographica
lists	Turbo-BrainVoyager
lists	CRL Unbiased and Deformable Spatiotemporal Atlas of the Fetal Brain
lists	UNC-Wisconsin Neurodevelopment Rhesus MRI Database
lists	Virtual Electrode Recording Tool for EXtracellular potentials (VERTEX)
lists	VMTK in 3D Slicer
lists	Wisconsin Cortical Thickness Analysis (CTA) Toolbox
lists	XFSL: An FSL toolbox
lists	XNBC
lists	YMDTI: Diffusion Tensor Images of Healthy Young Males
lists	BraTumIA (Brain Tumor Image Analysis)
lists	CAWorks
lists	Functional Real-time Interactive Endogenous Neuromodulation and Decoding (FRIEND)
lists	Graph Theory GLM (GTG) MATLAB Toolbox
lists	Functional Mixed Processes Models
lists	Papaya
lists	Parallel Stochastic Ion Channel Simulator
lists	Advanced Connectivity Analysis (ACA)
lists	International Imaging Genetics Conference
lists	Analyze Software System
lists	Optseq
lists	ENIGMA-DTI Pipeline
lists	Umea Brain Arteries
lists	MetaSearch
lists	BrainBox
lists	BluePyOpt
lists	MultiXplore
lists	Automatic Tractography-based Parcellation Pipeline
lists	Epilepsy T1 and Hippocampal Segmentation Datasets
lists	Mixed Effect Model of Genetic-Set and Environment Interaction
lists	masked ICA (mICA) Toolbox
lists	Altered States Database
lists	User Friendly Functional Connectivity - UF²C
lists	Intra- and inter-scanner reliability of RS-fMRI BOLD and ASL with eyes closed vs. eyes open
lists	Region to Region
lists	Waxholm Space Atlas of the Sprague Dawley Rat Brain
lists	Nutil - Neuroimaging utilities
lists	MeshView
lists	vini: A viewer for fMRI data
lists	brainGraph
lists	Diffusion Toolkit
lists	Neurodocker
lists	HeuDiConv: a heuristic-centric DICOM converter
lists	Knowing what you know (kwyk) - Bayesian Brain Parcellation
lists	Rhesus Macaque Brain Atlases
lists	MIITRA atlas
lists	MonkeyCBP
lists	ReproNim/containers
lists	ReproMan
lists	ABCD-ReproNim Course
lists	Ventricular Morphometry Analysis System
lists	ONPRC18 Multimodal MRI Atlas
lists	volBrain
lists	Waxholm Space
is affiliated with	Manual Align RTS2000
is related to	University of California; San Diego;National Center for Microscopy and Imaging Research - NCMIR
has parent organization	Harvard University; Cambridge; United States
has parent organization	NIH Blueprint for Neuroscience Research
is parent organization of	Licensing issues in software and data
is parent organization of	NITRC Enhanced Services
is parent organization of	Resource Ontology Discussion Group
is parent organization of	NITRC-IR
is parent organization of	1000 Functional Connectomes Project
is parent organization of	NYU CSC TestRetest
is parent organization of	NITRC Books
is parent organization of	NITRC Community
is parent organization of	ABIDE
is parent organization of	COBRE
is parent organization of	Group Sparse Canonical Correlation Analysis
is parent organization of	Challenge Competitions Collection
is parent organization of	1000 Functional Connectomes Project

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