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Resource Name
NIF Data Federation
RRID:SCR_004834 RRID Copied      
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NIF Data Federation (RRID:SCR_004834)
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Resource Information

URL: https://neuinfo.org/mynif/search.php?list=cover&q=*

Proper Citation: NIF Data Federation (RRID:SCR_004834)

Description: Service that partners with the community to expose and simultaneously drill down into individual databases and data sets and return relevant content. This type of content, part of the so called hidden Web, is typically not indexed by existing web search engines. Every record links back to the originating site. In order for NIF to directly query these independently maintained databases and datasets, database providers must register their database or dataset with the NIF Data Federation and specify permissions. Databases are concept mapped for ease of sharing and to allow better understanding of the results. Learn more about registering your resource, http://neuinfo.org/nif_components/disco/interoperation.shtm Search results are displayed under the Data Federation tab and are categorized by data type and nervous system level. In this way, users can easily step through the content of multiple resources, all from the same interface. Each federated resource individually displays their query results with links back to the relevant datasets within the host resource. This allows users to take advantage of additional views on the data and tools that are available through the host database. The NIF site provides tutorials for each resource, indicated by the Professor Icon professor icon showing users how to navigate the results page once directed there through the NIF. Additionally, query results may be exported as an Excel document. Note: NIF is not responsible for the availability or content of these external sites, nor does NIF endorse, warrant or guarantee the products, services or information described or offered at these external sites. Integrated Databases: Theses virtual databases created by NIF and other partners combine related data indexed from multiple databases and combine them into one view for easier browsing. * Integrated Animal View * Integrated Brain Gene Expression View * Integrated Disease View * Integrated Nervous System Connectivity View * Integrated Podcasts View * Integrated Software View * Integrated Video View * Integrated Jobs * Integrated Blogs For a listing of the Federated Databases see, http://neuinfo.org/mynif/databaseList.php or refer to the Resources Listed by NIF Data Federation table below.

Abbreviations: Data Federation

Synonyms: Neuroscience Information Framework Data Federation

Resource Type: service resource, portal, data or information resource

Keywords: semantics, neuroscience, animal, annotation, antibody, biospecimen, brain activation foci, clinical trial, connectivity, dataset, disease, drug, grant, image, microarray, model, multimedia, negative data, pathway, people, plasmid, registry, software, brain region, cell, gene, molecule, multi-level, nervous system, nervous system function, model

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This resource

uses

MNI Podcasts

uses

Educational Resources in Neuroscience

uses

Mind Hacks

uses

BAMS Nested Regions

uses

Indeed

uses

NINDS Disorder Index

uses

Drug Design Data Resource

uses

PubMed Health

uses

This Week In Science

uses

Science Talk

uses

BAMS Connectivity

uses

Lady Scientist

uses

Psychology Corner

uses

Wired Science

uses

CENtral Science

uses

RetractionWatch.com

uses

The Guardian: Science Weekly

uses

H2SO4Hurts

uses

60-Second Mind

uses

PLoS Blogs

uses

Clarity resources

uses

Open Source Brain

uses

Diabetic Complications Consortium

uses

Integrated Animals

uses

Kawasaki Disease Dataset

uses

EEGbase

uses

Integrated Models

uses

Lifespan Observations Database

uses

NIF Web Services

uses

NIF Blog

uses

ATCC

uses

Cerebellar Platform

uses

Brain Machine Interface Platform

uses

Rafael Yustes Laboratory

uses

ASAP

uses

NIH VideoCasting

uses

NIDA Data Share

uses

Neurofed

uses

Candida Genome Database

uses

Addgene

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ASPGD

uses

Glomerular Activity Response Archive

uses

WikiPathways

uses

AmiGO

uses

NeuroMorpho.Org

uses

Cell Centered Database

uses

Integrated

uses

Community Structure-Activity Resource

uses

ClinicalTrials.gov

uses

Ensembl

uses

GeneNetwork

uses

Avian Brain Circuitry Database

uses

EcoCyc

uses

Entrez Gene

uses

Zebrafish Information Network (ZFIN)

uses

Arredondo ANT fNIRS dataset1

uses

Grants.gov

uses

T3DB

uses

Simtk.org

uses

PharmGKB

uses

DrugBank

uses

Aging Genes and Interventions Database

uses

Gene Expression Nervous System Atlas

uses

SumsDB

uses

bioDBcore

uses

BioNumbers

uses

Gene Ontology

uses

Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat

uses

Gramene

uses

Retina Project

uses

HomoloGene

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ArrayExpress

uses

Journal of Visualized Experiments

uses

Allen Mouse Brain Reference Atlas

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Gene Weaver

uses

Visiome Platform

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Developmental Therapeutics Program

uses

NeuroMab

uses

WormBase

uses

NeuronDB

uses

Integrated Grants

uses

studyforrest.org

uses

BrainInfo

uses

Mouse Phenome Database (MPD)

uses

NCBI Taxonomy

uses

NCBI Protein Database

uses

Psychoactive Drug Screening Program Ki Database

uses

Nuclear Receptor Signaling Atlas

uses

Brede Database

uses

NeuroImaging Tools and Resources Collaboratory (NITRC)

uses

Mouse Genome Informatics Transgenes

uses

Reactome

uses

Cell Image Library (CIL)

uses

BAMS Cells

uses

Synapse Web

uses

Integrated Videos

uses

NeuroVault

uses

Royal College of Psychiatrists Podcasts

uses

WU-Minn HCP 500 Subjects MR and MEG Release

uses

Data.gov Science and Research Data Catalog

uses

NITRC-IR

uses

One Mind Biospecimen Bank Listing

uses

Integrated Brain Gene Expression

uses

BrainSpan

uses

All In The Mind

uses

Scientific American Cross-Check

uses

PubChem

uses

NeuroPod

uses

BrainSpan

uses

Health.Data.gov

uses

Biointeractive

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UniProtKB

uses

Gray Matters

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dkCOIN

uses

Brain Science Podcast

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NIGMS Human Genetic Cell Repository

uses

DISCO

uses

GeneDB Lmajor

uses

TAIR

uses

ScienceNOW

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Daily Scan

uses

SGD

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Integrated Software

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BrainPod

uses

GeneDB Tbrucei

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MPO

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PANTHER

uses

Neurology Podcast

uses

Integrated Disease

uses

VMD

uses

UCSF Laboratory for Visual Neuroscience

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NIMH Chemical Synthesis and Drug Supply Program

uses

NIH Neuroscience Microarray Consortium

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SGN

uses

Protocol Online - Your labs reference book

uses

Integrated Podcasts

uses

OpenNeuro

uses

National Academy of Sciences Podcasts

uses

Beta Cell Biology Consortium

uses

Naturejobs

uses

Scientific American Guest Blog

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jobs.ac.uk

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New Scientist Jobs

uses

Science Careers

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Access-ScienceJobs.co.uk

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ScienceBlogs: Life Science

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ScienceBlogs: Brain and Behavior

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TheScienceJobs.com

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Nature Network Blogs

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The Guardian: Science

uses

LabSpaces

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ScienceBlogs: Medicine and Health

uses

Scientific American Observations

uses

Scientific American Bering in Mind

uses

QUEST

uses

Daring Nucleic Adventures - genegeek

uses

Oxford Science Blog

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Sciblogs

uses

New York Times - Well

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SciLogs

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Cassandras Tears

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BioPortfolio

uses

Now at NEJM

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1000 Functional Connectomes Project

uses

Integrated Jobs

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Integrated Blogs

uses

JCVI CMR

uses

SciCrunch Registry

uses

Neuroskeptic

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CRCNS

uses

Expression Atlas of the Marmoset

uses

IXI dataset

uses

Integrated Auto-Extracted Annotation

uses

EU Clinical Trials Register

uses

Integrated Clinical Trials

uses

Human Brain Atlas

uses

goCognitive

uses

Law and Neuroscience

uses

International Mouse Phenotyping Consortium (IMPC)

uses

ClinVar

uses

Integrated Gene-Disease Interaction

uses

XNAT Central

uses

neuroelectro

uses

Integrated Nervous System Connectivity

uses

Antibody Registry

uses

OMIA - Online Mendelian Inheritance in Animals

uses

OMIM

uses

Science Podcast

uses

Mouse Genome Informatics (MGI)

uses

Monster

uses

NCBI

uses

Wired Science Blogs

uses

F1000 Posters

uses

Neurophilosophy

uses

Comparative Toxicogenomics Database (CTD)

uses

FlyBase

uses

GeneReviews

uses

GeneDB Pfalciparum

uses

Naturally Selected

uses

PomBase

uses

Pseudomonas Genome Database

uses

The Guardian: Science Videos

uses

Orphanet

uses

Dictyostelium discoideum genome database

uses

PeptideAtlas

uses

NeuroSynth

uses

neuropathology blog

uses

Genomes Unzipped

uses

National Institutes of Health Research Portfolio Online Reporting Tool

uses

BrainMaps.org

uses

It Takes 30

uses

Gait in Parkinson's Disease

uses

Physiobank

uses

Gait Dynamics in Neuro-Degenerative Disease Data Base

uses

American Journal of Psychiatry Podcasts

uses

Neurodatabase.org

uses

Brain Architecture Management System

uses

RanchoBiosciences

uses

ModelDB

uses

CoCoMac

uses

Olfactory Bulb Odor Map DataBase (OdorMapDB)

uses

Gene Expression Omnibus

uses

Caenorhabditis Genetics Center

uses

Labome

uses

Open Access Series of Imaging Studies

uses

Biological General Repository for Interaction Datasets (BioGRID)

uses

Olfactory Receptor DataBase

uses

T1DBase

uses

Gemma

uses

CellML Model Repository

uses

ResearchCrossroads

uses

Biocompare

uses

BioNOT

uses

Hays

uses

Research Blogging

uses

Discover Magazine

uses

PolygenicBlog

uses

Kawasaki Disease Dataset2

uses

Allen Mouse Brain Connectivity Atlas

uses

Integrated Manually Extracted Annotation

uses

Roadmap Epigenomics Project

uses

Integrated Cell Lines

uses

National Mouse Metabolic Phenotyping Centers

uses

Mendelspod

uses

Integrated Snippets

uses

Integrated Datasets

uses

Nature Podcast

uses

GWAS: Catalog of Published Genome-Wide Association Studies

uses

KEGG

uses

USC Multimodal Connectivity Database

uses

Inside NIA: A Blog for Researchers

uses

Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)

uses

NIF Registry Automated Crawl Data

uses

Genetic Analysis Software

uses

anage

uses

Intestinal Stem Cell Consortium

uses

Animal QTLdb

uses

elements of morphology

uses

Human Life-Table Database

uses

Clinical Genomic Database

uses

NIDDK Central Repository

uses

MONARCH Initiative

uses

Human Phenotype Ontology

is used by

SciCrunch

is used by

NIDDK Information Network (dkNET)

lists

AutDB

lists

Drug Related Gene Database

lists

Gene Ontology Tools

lists

CHEBI

is listed by

3DVC

is related to

International Mouse Strain Resource

is related to

Internet Brain Volume Database

is related to

Resource Identification Portal

is related to

Rat Genome Database (RGD)

is related to

VISTA Enhancer Browser

is related to

NIH Human Pluripotent Stem Cell Registry

is related to

Zebrafish International Resource Center

is related to

Bloomington Drosophila Stock Center

is related to

Journal of Comparative Neurology Antibody database

has parent organization

Neuroscience Information Framework

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