Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chimerascan Resource Report Resource Website 50+ mentions |
chimerascan (RRID:SCR_013298) | chimerascan | software resource | Software package that detects gene fusions in paired-end RNA sequencing (RNA-Seq) datasets. Used for detection of chimeric transcripts in high-throughput sequencing data. | Gene fusion detection, paired-end RNA sequencing data, RNA sequencing data, chimeric transcripts detection, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools |
Free, Available for download, Freely available | biotools:chimerascan, OMICS_01343 | https://bio.tools/chimerascan | SCR_013298 | 2026-08-08 12:00:21 | 53 | |||||||
|
PlasmoDB Resource Report Resource Website 1000+ mentions |
PlasmoDB (RRID:SCR_013331) | data or information resource, production service resource, web service, software resource, data analysis service, data access protocol, database, analysis service resource, service resource, storage service resource, data repository | Functional genomic database for malaria parasites. Database for Plasmodium spp. Provides resource for data analysis and visualization in gene-by-gene or genome-wide scale. PlasmoDB 5.5 contains annotated genomes, evidence of transcription, proteomics evidence, protein function evidence, population biology and evolution data. Data can be queried by selecting from query grid or drop down menus. Results can be combined with each other on query history page. Search results can be downloaded with associated functional data and registered users can store their query history for future retrieval or analysis.Key community database for malaria researchers, intersecting many types of laboratory and computational data, aggregated by gene. | Functional, genomic, database, malaria, parasite, data, analysis, visualization, gene, genome, annotation, transcription, proteomics, protein, evolution, FASEB list |
uses: SynView is related to: GeneDB Pfalciparum has parent organization: Eukaryotic Pathogen Database Resources has parent organization: Pennsylvania State University has parent organization: University of Georgia; Georgia; USA |
malaria | NIAID | PMID:18957442 | nif-0000-03314, SCR_017665, r3d100011569 | SCR_013331 | PlasmoDB, Plasmodium Genomics Resource, PlasmoDB 5.5, Plasmodium genome-resource | 2026-08-08 11:59:55 | 1324 | ||||||
|
Probalign Resource Report Resource Website 10+ mentions |
Probalign (RRID:SCR_013332) | Probalign | image analysis software, software resource, software application, alignment software, data processing software | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Software that uses partition function posterior probability estimates to compute maximum expected accuracy multiple sequence alignments. Computes maximal expected accuracy multiple sequence alignments from partition function posterior probabilities.Produces accurate alignments on long and heterogeneous length datasets containing protein repeats. |
is used by: eProbalign is listed by: OMICtools is listed by: Debian has parent organization: New Jersey Institute of Technology; New Jersey; USA |
PMID:16954142 DOI:10.1093/bioinformatics/btl472 |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00985 | https://sources.debian.org/src/probalign/ | SCR_013332 | Probalign: multiple sequence alignment using partition function posterior probabilities | 2026-08-08 12:00:10 | 16 | ||||||
|
wapRNA Resource Report Resource Website 1+ mentions |
wapRNA (RRID:SCR_013292) | wapRNA | software resource | A free web-based application for the processing of high-throughput RNA-Seq data from next generation sequencing (NGS) platforms, such as Genome Analyzer of Illumina Inc. (Solexa) and SOLiD of Applied Biosystems (SOLiD). | is listed by: OMICtools | PMID:21896507 | OMICS_00370 | SCR_013292 | 2026-08-08 12:00:09 | 1 | |||||||||
|
Diogenes Resource Report Resource Website 10+ mentions |
Diogenes (RRID:SCR_013293) | software resource | Diogenes is a pan-European Programme targeting the obesity problem from a dietary perspective: seeking new insights and new routes to prevention. An Integrated Project of the EU Sixth Framework Programme for Research and Technological Development (2005-2009). A new methodology has been developed for consistent assignment of GI values to foods across the five European databases used in the Diogenes intervention study. GI values have been assigned according to five decreasing levels of confidence: (1) Measured values for specific foods; (2) Published values from published sources; (3) Equivalent values where published values for similar foods existed; (4) Estimated values three values selected representing low/medium/high GI ranges; (5) Nominal values assigned as 70, where no other value could be assigned with sufficient confidence. Sponsor. A a r h u s K a r l s h a m n D e n m a r k A / S Products: Vegetable Oils (Maize and Rapeseed) click here for the link to the website of AarhusKarlshamn Denmark B a r i l l a Products: Pasta click here for the link to the website of Barilla B e a u v a i s Products: Canned fish products, jam, soups & convenience foods click here for the link to the website of Beauvais C a m p i n a I n s t i t u t e At the Campina Institute dairy products and science come together. The Campina brands include among others: Optimel/ Optiwel, Vifit, Milner, Valess Click here for the link to the website of Campina Institute C o c a - C o l a S e r v i c e s S . A . Products: beverages click here for the link to the website of Coca-Cola Services S.A. D a l o o n Products: Spring rolls and other convenience foods click here for the link to the website of Daloon D a n g S / A Products: egg products click here for the link to the website of Dang A/S D a n i s c o Products: Sugar (different types) click here for the link to the website of Danisco D a n i s h D a i r y B o a r d Products: Dairy products (milk, yoghurt, cheese) click here for the link to the website of the Danish Dairy Board D a n s k e S l a g t e r i e r Products: Pig Meat Products (various types) click here for the link to the website of Danske Slagterier D r . O e t k e r Products: Ready meals click here for the link to the website of Dr. Oetker E u r o g r a n A / S Products: Instant chocolate, cappuccino, soup and mashed poptatoes click here for the link to the website of Eurogran A/S F r i g o d a n Products: Frozen vegetables click here for the link to the website of Frigodan F r i s k o Products: Ice cream click here for the link to the website of Frisko G a m b a F o o d Products: Frozen fish (different types of European and Asian origin) G i l d e N o r g e B A Products: meat click here for the link to the website of Gilde Norge BA H a t t i n g Products: Bread products (different types) click here for the link to the website of Hatting H e i n z Products: ketchup and a broad range of products under HONIG, Konininklijke de Ruijter, VENZ, Carvan Cevitan, Roosvicee click here for the link to the website of Heinz H j e r t i n g L a k s Products: salmon products click here for the link to the website of Hjerting Laks K e l l o g g '' s D e n m a r k Products: different types of Breakfast Cereals Click here for the link to the website of Kellogg''s Denmark K e l l o g g '' s E u r o p e Products: Ready-To-Eat Cereals and Cereal Bars Click here for the link to the website of Kellogg''s K d b r a n c h e n s F l l e s r d Products: meat: beaf and veal click here for the link to the website of Kdbranchens Fllesrd K r a f t Products: chocolate, Philadelphia cream cheese, pasta, Estrella chips & nuts, mayonaise, salad dressings click here for the link to the website of Kraft L a n t m n n e n M i l l s A / S Products: various grains and flour L U , G e n e r a l B i s c u i t s N e d e r l a n d B . V . Products: biscuits click here for the link to the website of LU L y k k e b e r g A / S Products: Fish (marinated herring) click here for the link to the website of Lykkeberg A/S M a s t e r f o o d s Products: Rice and confectionery click here for the different websites of Masterfoods: Uncle Bens, Mars, Twix, Snickers, M&M''s, Masterfoods N u t r i t i o n e t S a n t / M o d i f a s t Products: Modifast (Low Calorie Diet) click here for the link to the website of Nutrition et Sant click here for the link to the website of Modifast P a r t n e r s h i p f o r D a n i s h P o t a t o e s Products: potatoes (different varieties) click here for the link to the website of the Partnership for Danish Potatoes P a s t a l i f e Products: pasta (with high protein content) click here for the link to the website of Pastalife R a h b e k Products: Frozen, ready-made fish dishes click here for the link to the website of Rahbek R i e b e r & S n D a n m a r k A / S Products: mustard, ketchup, mayonnaise, sanwich filling, spreads and other dressings click on the following links for the different websites of Rieber and Sn Danmark A/S: Rieberson, Bahncke, K-Salat R o y a l G r e e n l a n d A / S Products: cold-water prawns click here for the link to the website of Royal Greenlands A/S S c h u l s t a d Products: Rye bread and wheat bread, including high- and low GI varieties click here for the link to the website of Schulstad S n d e r j y d s k K l Products: Frozen kale, spinach and cabbage. click here for the link to the website of Snderjydsk Kl S u i k e r U n i e Products: different types of sugar click here for the link to the website of Suiker Unie T u l i p F o o d C o m p a n y Products: Meat products (cold cuts, cooked meat, bacon, meat balls, ready-meals, soups etc.) Click here for the link to the website of Tulip Food Company U n i l e v e r Products: a broad range of products under Becel, Bertolli, Calv, Knorr, Iglo, Mora, Conimex, Unox click here for the link to the website of Unilever W a s a b r d A / S Products: Crisp bread click on the following links for the different websites of Wasabrd A/S: Wasa Denmark or Wasa International | FASEB list | nif-0000-30454 | SCR_013293 | Diogenes | 2026-08-08 12:00:21 | 43 | ||||||||||
|
Children and Adults with Attention Deficit/Hyperactivity Disorder Resource Report Resource Website 1+ mentions |
Children and Adults with Attention Deficit/Hyperactivity Disorder (RRID:SCR_013384) | CHADD | nonprofit organization | Non-profit organization serving individuals with attention deficit-hyperactivity disorder (AD/HD) and their families. CHADD has over 16,000 members in 200 local chapters throughout the U.S. Chapters offer support for individuals, parents, teachers, professionals, and others. CHADD''s primary objectives are: to provide a support network for parents and caregivers; to provide a forum for continuing education; to be a community resource and disseminate accurate, evidence-based information about AD/HD to parents, educators, adults, professionals, and the media; to promote ongoing research; and to be an advocate on behalf of the AD/HD community. In general, CHADD works to improve the lives of people affected by AD/HD through: Collaborative Leadership, Advocacy, Research Education and, Support CHADD has three current priority objectives: (1) to serve as a clearinghouse for evidence-based information on AD/HD, (2) to serve as a local face-to-face family support group for families and individuals affected by AD/HD, and (3) to serve as an advocate for appropriate public policies and public recognition in response to needs faced by families and individuals with AD/HD. CHADD is a membership organization, produces the bi-monthly Attention! magazine (for members), and sponsors an annual conference. The National Resource Center on AD/HD (NRC) is the CDC-funded national clearinghouse for evidence-based information about AD/HD. | education, family, adult human, advocacy, attention, attention deficit disorder, caregiver, child, deficit, disorder, hyperactivity, hyperactivity disorder, individual, media, medication, news, parent, professional, research, support, teacher, treatment, young human | Attention deficit-hyperactivity disorder | ISNI: 0000 0004 0546 7056, nif-0000-10195, grid.433005.1 | https://ror.org/01ds3sh29 | SCR_013384 | 2026-08-08 12:00:21 | 2 | ||||||||
|
MD Biosciences Resource Report Resource Website 1+ mentions |
MD Biosciences (RRID:SCR_013383) | commercial organization, antibody supplier, reagent supplier, material resource | An Antibody supplier | nlx_152406 | SCR_013383 | MD Bioproducts | 2026-08-08 12:00:10 | 3 | |||||||||||
|
Cortical Box Method: Quantitative analysis for gene expressions in rodent cortex Resource Report Resource Website 1+ mentions |
Cortical Box Method: Quantitative analysis for gene expressions in rodent cortex (RRID:SCR_013387) | software resource, software application, data analysis software, data processing software | The Cortical box method is an analytical method that standardizes the serial coronal sections of rodent cortex for quantitative analysis (details are written in the manual document). There are several tools necessary for this analysis. Currently, a program CxStand which is a core program of Cortical Box method is available for download. It standardizes a set of serial sections of rat cortex into standard rectangulars. Cortical box method was developed by Dr. Junya Hirokawa in the Yamamori Lab to map c-fos immunoreactivity in the rat cortex. This method was now applied to analyze the in situ data. From the original image, the cortical region is taken out and transformed, then normalized. You do this to a set of coronal sections of a rat cortex. Then, the cortex becomes a box. You can now slice the cortical box at desired lamina positions for layer maps. For more information, please refer to, http://www.nibb.ac.jp/brish/Gallery/corticalboxE.html. Requirements Cortical Box Method software is written in Labview and requires Labview version 7.0 (or later) and Vision development version 7.0 (or later). Labview and Vision are products of National Instruments (http://www.ni.com/ ). I confirmed (*) the Cortical box software works in the latest versions of Labview (ver.8.6) and Vision development (ver. 8.6), which can be downloaded without charge in the National Instruments web site (http://www.ni.com/ ) and can be used as evaluation softwares for 30 days. I tested the programs on PCs running the Windows family of operating systems. *A VI called image to image does not exist in Labview 8.6, please replace it into image to image 2. Programs CxStand ver 1.01 - (English, 680KB, Latest Version (2008/09/25 Update)) Standardization of a part of cortex into a rectangular. CBanalysis - construct 3D cortical box and create specific layer maps. DensityMap - Creating denisty map of staining signals. Copyright (c) 2008 Junya Hirokawa. All rights reserved. This program is free software; you can redistribute it and/or modify it. | gene expressions, coronal sections, cortex, quantitative analysis, rodent, standardizes | has parent organization: National Institute for Basic Biology; Okazaki; Japan | nif-0000-11885 | SCR_013387 | Cortical Box Method | 2026-08-08 12:00:10 | 5 | |||||||||
|
University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA Resource Report Resource Website 1+ mentions |
University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA (RRID:SCR_013302) | Penn Medicine | university | Medical school of the University of Pennsylvania. It is located in the University City section of Philadelphia. |
is related to: Alzheimers Disease Genetics Consortium is related to: International Genomics of Alzheimers Project is related to: Beta Cell Biology Consortium is related to: Cancer Imaging Phenomics Toolkit has parent organization: University of Pennsylvania; Philadelphia; USA has parent organization: University of Pennsylvania; Philadelphia; USA is parent organization of: Center for Magnetic Resonance and Optical Imaging is parent organization of: Penn Induced Pluripotent Stem Cell Core Facility is parent organization of: Alzheimers Disease Genetics Consortium is parent organization of: BEERS is parent organization of: ASL data processing tool box is parent organization of: National Institute on Aging Genetics of Alzheimer’s Disease Data Storage Site (NIAGADS) is parent organization of: University of Pennsylvania Center for Neurodegenerative Disease Research is parent organization of: Chronic Renal Insufficiency Cohort Study is parent organization of: NICE-SIGN is parent organization of: University of Pennsylvania Genomics Analysis Core is parent organization of: Penn Microarray Core Facility is parent organization of: Penn Electron Microscopy Core Laboratory is parent organization of: MATCHCLIP is parent organization of: International Genomics of Alzheimers Project is parent organization of: Penn Diabetes Research Center is parent organization of: Penn Diabetes Research Center Metabolomics Core is parent organization of: Penn Diabetes Research Center Functional Genomics Core is parent organization of: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Cell Morphology Core is parent organization of: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Immunology Core is parent organization of: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis is parent organization of: Hemodialysis Pilot Studies Consortium is parent organization of: NETMAGE is parent organization of: University of Pennsylvania Perelman School of Medicine Animal Biosafety Level 3 Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Bioinformatics Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine CRISPR Cas9 Mouse Targeting Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Cytomics and Cell Sorting Resource Laboratory Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Cell and Developmental Biology Microscopy Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Electron Microscopy Resource Lab Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Cell and Animal Radiation Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine High Throughput Screening Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Neurobehavior Testing Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Human Immunology Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Metabolomics Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Ovarian Cancer Research Center Tumor BioTrust Collection Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Penn Genomic Analysis DNA Sequencing Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Next Generation Sequencing Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Penn Genomic Analysis Molecular Profiling Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Penn Gnotobiotic Mouse Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Small Animal Imaging Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Transgenic and Chimeric Mouse Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Chemical and Nanoparticle Synthesis Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Acute Care Biobanking Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Cell Center Stockroom Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Biostatistics Analysis Center Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Center for Advanced Metabolic Imaging in Precision Medicine Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Center for Advanced Computer Tomography Imaging Services Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Center for Biomedical Image Computing and Analytics Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Brain Science Service Center Core Facility is parent organization of: University of Pennsylvania Center for Advanced Magnetic Resonance Imaging and Spectroscopy Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Center for Human Phenomic Science (CHPS) is parent organization of: University of Pennsylvania Perelman School of Medicine Center for BioMedical Informatics Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Center for Preventive Ophthalmology and Biostatistics Biostatistical Consulting Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Cell Center Services Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Center for AIDS Research Virus and Reservoirs Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine ITMAT Study Design and Biostatistics Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine MINS Machine Shop Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Johnson Foundation Biophysical and Structural Biology Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Mouse Cardiovascular Phenotyping Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Molecular Pathology and Imaging Core (MPIC) is parent organization of: University of Pennsylvania Perelman School of Medicine Neurons R Us Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Microbial Culture and Metabolomics Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Muscle Physiology Assessment Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Induced Pluripotent Stem Cell Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Nuclear Medicine Physics and Instrumentation Group Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Research Instrumentation Shop Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Mixed Methods Research Lab Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Rodent Metabolic Phenotyping Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Ultrasound Research Laboratory Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Positron Emission Tomography Center Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Viral Molecular High Density Sequencing Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Translational Bio-Imaging Center Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Tumor Tissue Biospecimen Bank Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Vector Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Clinical Imaging Service Center Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine ITMAT Bioinformatics Laboratory Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Biomedical Data Science Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Community Engagement and Research Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Radioimmunoassay and Biomarkers Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Neuroimaging and Cognitive Core Facility is parent organization of: University of Pennsylvania Penn Genomics and Sequencing Core Facility is parent organization of: University of Pennsylvania School of Medicine Advanced Core for Microscope Engineering Core Facility |
Wikidata:Q4120165, ISNI:0000 0001 2301 2088, grid.471400.6 | https://ror.org/041phzg73 | SCR_013302 | University of Pennsylvania Perelman School of Medicine, Perelman School of Medicine, University of Pennsylvania School of Medicine, Raymond & Ruth Perelman School of Medicine | 2026-08-08 12:00:10 | 1 | ||||||||
|
CARDinal Plane VIEWing System Resource Report Resource Website 1+ mentions |
CARDinal Plane VIEWing System (RRID:SCR_013422) | image processing software, software resource, software application, data processing software | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on June 1, 2023. Cardviews is a CARDinal plane VIEWing System developed at the Center for Morphometric Analysis at the Massachusetts General Hospital. It is a tool for brain morphometry (including volumetric analysis using xvol) and this program emerged as a product of our methodological development. While some of its functionality is specifically tailored for our general segmentation and neocortical parcellation routines, the imaging interface, segmentation tools, and localization capacity have utility extending beyond the specific aims motivating its initial conception. : | has parent organization: Harvard Medical School; Massachusetts; USA | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00278 | SCR_013422 | Cardviews | 2026-08-08 12:00:11 | 1 | |||||||||
|
MP Biomedicals Resource Report Resource Website 10000+ mentions |
MP Biomedicals (RRID:SCR_013308) | commercial organization, antibody supplier, reagent supplier, material resource | An Antibody supplier | nlx_152415 | SCR_013308 | 2026-08-08 11:59:54 | 21615 | ||||||||||||
|
Bender MedSystems Resource Report Resource Website 50+ mentions |
Bender MedSystems (RRID:SCR_013310) | commercial organization, antibody supplier, reagent supplier, material resource |
THIS RESOURCE IS NO LONGER IN SERVICE. Documented September 15, 2017.\\\\\\ \\\\\\ An Antibody supplier. |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_152294 | SCR_013310 | 2026-08-08 12:00:10 | 70 | |||||||||||
|
MABTECH Resource Report Resource Website 1000+ mentions |
MABTECH (RRID:SCR_013398) | commercial organization | An Antibody supplier | nlx_152403, grid.452552.1 | https://ror.org/057s3rs39 | SCR_013398 | Mabtech AB | 2026-08-08 11:59:55 | 3389 | ||||||||||
|
DC Analysis programs Resource Report Resource Website 10+ mentions |
DC Analysis programs (RRID:SCR_013431) | software resource | These programs have been written over the last 20 years for analysis of our own results. They all do some things that are still not available in any commercial program. The programs are written in protected-mode 32-bit Fortran 90, with some assembler subroutines for fast graphics, and the Gino graphics library. Thus they are essentially DOS programs, though they are usually run from Windows, either via a desktop icon (the .ico files) or in the DOS box. The manuals (now in pdf format), have now all been collected into a single document, DCMANUALS.PDF, which should be downloaded, and the bits that you need can then be printed. Note that some sections are common to many or all programs, e.g. the notes on the graph and histogram drawing subroutines, and it is important to read this before using any of the programs (though there is a lot of online help (hit F1) for the graphics, and also in SCAN. Sponsor. Our work was supported by the Wellcome Trust (project grant 074491) and the Medical Research Council (programme grant G0400869). | has parent organization: University College London; London; United Kingdom | nif-0000-30411 | SCR_013431 | DOS | 2026-08-08 11:59:56 | 14 | ||||||||||
|
Dali Server Resource Report Resource Website 500+ mentions |
Dali Server (RRID:SCR_013433) | production service resource, software resource, data analysis service, analysis service resource, service resource | Network service for comparing protein structures in 3D. You submit the coordinates of a query protein structure and Dali compares them against those in the Protein Data Bank (PDB). You receive an email notification when the search has finished. In favourable cases, comparing 3D structures may reveal biologically interesting similarities that are not detectable by comparing sequences. Requests can also be submitted by e-mail to dali-server at helsinki dot fi. The body of the e-mail message must contain atomic coordinates in PDB format. If you want to know the structural neighbours of a protein already in the Protein Data Bank (PDB), you can find them in the Dali Database. If you want to superimpose two particular structures, you can do it in the pairwise DaliLite server. Academic users may download the DaliLite program for local use. | Protein structure comparison server, protein structure, comparison server, bio.tools, FASEB list |
is listed by: Debian is listed by: bio.tools has parent organization: University of Helsinki; Helsinki; Finland |
PMID:20457744 | Free, Freely available | biotools:dali | https://bio.tools/dali | SCR_013433 | Dali | 2026-08-08 12:00:11 | 534 | ||||||
|
Matreya LLC Resource Report Resource Website 10+ mentions |
Matreya LLC (RRID:SCR_013390) | commercial organization, antibody supplier, reagent supplier, material resource | An Antibody supplier | nlx_152404 | SCR_013390 | 2026-08-08 11:59:55 | 15 | ||||||||||||
|
RosettaDock Resource Report Resource Website 100+ mentions |
RosettaDock (RRID:SCR_013393) | RosettaDock | software resource | Predicts the structure of a protein-protein complex from the individual structures of the monomer components. |
is listed by: OMICtools has parent organization: Johns Hopkins University; Maryland; USA |
OMICS_01604 | SCR_013393 | 2026-08-08 12:00:10 | 125 | ||||||||||
|
Epitomics Resource Report Resource Website 1+ mentions |
Epitomics (RRID:SCR_013516) | Epitomics | commercial organization, antibody supplier, reagent supplier, material resource | Original provider of rabbit monoclonal antibodies. Important Note for Epitomics Customers in the U.S.: As of Jan. 28, 2013, orders for Epitomics products will now be handled directly by Abcam. | has parent organization: Abcam | nlx_152357 | SCR_013516 | 2026-08-08 12:00:11 | 9 | ||||||||||
|
DsTool Resource Report Resource Website 1+ mentions |
DsTool (RRID:SCR_013483) | software resource, software application, simulation software, data visualization software, data processing software | Software package providing an interactive graphical interface for computations in dynamical systems and visualization of resulting geometric structures, designed for researchers and educators studying dynamical systems (both differential equations and discrete time systems). DsTool readily produces nice pictures for both discrete and continuous systems. | has parent organization: Cornell University; New York; USA | Public domain | nif-0000-00163 | SCR_013483 | DsTool | 2026-08-08 12:00:22 | 1 | |||||||||
|
Immuno-Biological Laboratories Resource Report Resource Website 500+ mentions |
Immuno-Biological Laboratories (RRID:SCR_013485) | commercial organization, antibody supplier, reagent supplier, material resource | An Antibody supplier | nlx_152385 | SCR_013485 | Immuno-Biological Laboratories Co, IBL, Ltd. | 2026-08-08 12:00:11 | 507 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
