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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Newcastle Brain Tissue Resource
 
Resource Report
Resource Website
Newcastle Brain Tissue Resource (RRID:SCR_013843) biomaterial supply resource, material resource A biomaterial supply resource which archives and disseminates brain tissue for the study of normal brain aging and brain disorders. Researchers must create an account in order to browse the database of available tissue. Samples are distributed to researchers in such a way that the identity and personal information of donors is protected. biomaterial resource, brain, brain tissue, brain bank, brain aging, brain disorder is listed by: Multiple Sclerosis Discovery Forum
is related to: Multiple Sclerosis Discovery Forum
has parent organization: Newcastle University; Newcastle upon Tyne; United Kingdom
Medical Research Council ;
NHS
Available to the research community SCR_013843 2026-08-01 12:10:55 0
Trinity Biobank
 
Resource Report
Resource Website
1+ mentions
Trinity Biobank (RRID:SCR_013279) Trinity Biobank biomaterial supply resource, material resource The Trinity Biobank was established in 2005 to serve the needs of researchers in the area of genetic epidemiology, population genetics and pharmacogenomics. Its services are available to researchers not only in Trinity College but to other institutions at home and abroad. We provide an automated DNA extraction service purifying large volumes blood (up to 10mL whole blood) and tissue DNA for archival and other purposes. In addition it makes available purified DNA and associated GWAS data from 2000 healthy donors for research use. A key requirement for reliable downstream use of DNA is purity and strand size. The quality of DNA in blood and tissue deteriorates upon storage without purification even at -80 degrees C. We ensure rapid turnaround of biological samples through automated extraction using the Qiagen Autopure system based on optimized ''salting out'' chemistry. The purified DNA sample may then be stored safely at -20 degrees C without deterioration thus freeing up valuable -80 degree C freezer space and the associated capital and maintenance cost as well as security and lab space provision. Automated DNA extraction is particularly suitable for high-throughput sample processing called for in epidemiological studies or simply for clearing sample inventory backlogs. The Trinity Biobank distributes control DNA to researchers as part of its remit to enhance the level of research activity and to synergize molecular medicine research nationally and internationally. The buffy coat collection has been made possible with the cooperation of the Irish Blood Transfusion Service (IBTS). An important requirement to access the collection is that the use of the samples relates only to ethically-approved research and to specifically-nominated research projects. The DNA collection consists of high quality human genomic DNA. Each of the available 2,000 samples is from a single individual and each sample comes with the age and gender data of the donor. The buffy coat sample is derived from the total white cell compliment (50mL buffy coat) of a blood donation (c 400mL). We will endeavor to fulfill samples number requests based on age and gender as best as possible. This collection has also been genotyped using the Affymetrix Genome-Wide Human SNP Array 6.0, featuring 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation (CNV). The DNA comes available as a 100ng/uL in 100uL of TE Buffer, ie in 10ug amounts in a separate screw-cap ampoule. The ampoules are shipped in 100-tube boxes (Sarstedt). Corresponding plasma (ACD) is also available on request. Genotype data is supplied in PLINK binary PED files format (http://pngu.mgh.harvard.edu/~purcell/plink/ ). dna, blood, tissue, buffy coat, cell, packed cell, cultured cell, buccal cell, whole blood, bodily fluid, fresh, frozen, healthy, normal, genetic epidemiology, population genetics, pharmacogenomics, gene, genetics, genome-wide association study, genome-wide association study data, genotype, dna extraction, non-mammalian, bacteria, gram-positive bacteria, gram-negative bacteria is listed by: One Mind Biospecimen Bank Listing
has parent organization: Trinity College Dublin; Dublin; Ireland
has parent organization: St. James Hospital; Dublin; Ireland
Healthy, Normal Public: Its services are available to researchers not only in Trinity College but to other institutions at home and abroad. The Trinity Biobank distributes control DNA to researchers as part of its remit to enhance the level of research activity and to synergize molecular medicine research nationally and internationally. It makes available purified DNA and associated GWAS data from 2000 healthy donors for research use. nlx_25068 http://www.tcd.ie/IMM/research_biobank.php SCR_013279 2026-08-01 12:10:53 3
Evaluation Instruments Bank
 
Resource Report
Resource Website
1+ mentions
Evaluation Instruments Bank (RRID:SCR_013246) material resource, assessment test provider The EIB provides assessment tests for substance disorder related clinical instruments that are freely available. Details regarding copyright and/or possible use restrictions are specified for each instrument. Instruments are generally classed according to the intervention field they are designed to be used in (treatment, prevention, or harm reduction), though some instruments may be usable in more than one field. drug, drug intervention, drug of abuse, assessment, harm reduction, human, adult human, early adult human, prevention, substance-related disorder, treatment has parent organization: European Monitoring Centre for Drugs and Drug Addiction nif-0000-24171 SCR_013246 EIB 2026-08-01 12:11:01 3
Duke Human Heart Repository
 
Resource Report
Resource Website
50+ mentions
Duke Human Heart Repository (RRID:SCR_013980) biomaterial supply resource, material resource A biomaterial supply resource which collects and disseminates human heart tissue. Samples include both failing and non-failing hearts, RNA/DNA analysis, tissue staining and immunofluorescence samples.The tissue that has been flash frozen and stored at -80˚C is acquired from distinct regions of the heart such as the LV free wall, septum, and valve leaflets. Individual sample sizes are typically 100-300mg for flash frozen tissues. The DHHR also serves as a resource for assay development, target identification, and sponsored research, capable of isolating cardiomyocytes from hearts and using them for in-vitro assays such as calcium handling, enzyme activity, signalling pathways and other biochemical research activities biomaterial supply resource, human heart, human heart tissue, cardiovascular, tissue, tissue sample lists: American Heart Association
lists: ASPET
lists: Duke Biobank
lists: International Society for Biological and Environmental Repositories
lists: American Society for Cell Biology
is listed by: Connected Researchers
is related to: Connected Researchers
has parent organization: Duke University; North Carolina; USA
Free, Available to the research community SCR_013980 2026-08-01 12:10:55 88
Osteogenesis Imperfecta Foundation
 
Resource Report
Resource Website
1+ mentions
Osteogenesis Imperfecta Foundation (RRID:SCR_015034) OIF institution Foundation for improving the quality of life for people affected by OI through treatment and cure research, education, awareness, and mutual support. OIF lists personal resources for individuals affected by osteogenesis imperfecta as well as professional and clinical resources for researchers. osteogenesis imperfecta, bone disease, brittle bone, patient support, cure research Osteogenesis imperfecta U.S. Combined Federal Campaign ;
Medical Research Charities ;
National Health Council ;
NORD ;
PAG ;
Rare Clinical Diseases Research Network
Public grid.423291.f, ISNI: 0000 0000 9148 0660, Crossref funder ID: 100003227 https://ror.org/05a6emh10 SCR_015034 Osteogenesis Imperfecta Foundation (OIF) 2026-08-01 12:05:12 1
University of Chicago Digestive Diseases Research Core Center Tissue Engineering and Cell Models Core
 
Resource Report
Resource Website
1+ mentions
University of Chicago Digestive Diseases Research Core Center Tissue Engineering and Cell Models Core (RRID:SCR_015604) TECM biomaterial supply resource, material resource Core that provides services such as a repository for intestinal cell lines, Tissue Engineering Models, experimental materials, and supplies for digestive disease research. TECM, tissue engineering, cell models is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Chicago Digestive Diseases Research Core Center
is organization facet of: University of Chicago Digestive Diseases Research Core Center
digestive disease NIDDK P30 DK042086 Available to the research community SCR_015604 2026-08-01 12:10:58 1
Sanford Burnham Prebys Medical Discovery Institute Stem Cell Core
 
Resource Report
Resource Website
Sanford Burnham Prebys Medical Discovery Institute Stem Cell Core (RRID:SCR_014856) biomaterial supply resource, material resource THIS RESOURCE IS NO LONGER IN SERVICE, documented August 23, 2016. The former functions of this facility are split into two separate operations. The first is the generation and characterization of induced Pluripotent Stem Cells (iPSCs) is now being performed on a collaborative basis for both internal and external investigators with the Snyder lab. The second is a shared laboratory dedicated to the culture and analysis of stem cells that is available to SBP investigators. stem cell, facility, la jolla, pluripotent stem cells, ipsc, analysis THIS RESOURCE IS NO LONGER IN SERVICE SCR_014856 SBP Medical Discovery Institute Stem Cell Core, SBP Stem Cell Core 2026-08-01 12:11:04 0
Localite TMS Navigator
 
Resource Report
Resource Website
1+ mentions
Localite TMS Navigator (RRID:SCR_016126) resource An instrument. Navigation system for transcranial magnetic stimulation (TMS). hardware, instrument, equipment, tms, neuroimaging, neuroscience, neurology, transcranial, magnetic, stimulation SCR_016126 2026-08-01 12:05:28 3
Human Thalamus in 3D Stereotactic Coordinates
 
Resource Report
Resource Website
1+ mentions
Human Thalamus in 3D Stereotactic Coordinates (RRID:SCR_014214) image collection, data or information resource A research tool for clinical and experimental neuroscience, which provides images of human thalamus in the stereotactic planes of the coordinate system based on intercommissural line. Images include histological sagittal sections, sagittal maps, coronal maps, horizontal maps, and MRI images all from the same brain. The website also provides materials and methods section, references to the articles and presentations describing research data (on which the maps are based), and a bibliography on the synaptic relationships of subcortical and cortical afferents with projection and local circuit neurons in the motor thalamus. Thalamic motor nuclei, stereotactic atlas plates, AC-PC coordinates, VIM, thalamic nomenclatures, Nigrothalamic projection zone, Pallidothalamic projection zone, Cerebellothalamic projection zone, Thalamic GABAergic circuits, GAD65 has parent organization: University of Iowa; Iowa; USA Register to access original images, Acknowledgement requested SCR_014214 human motor thalamus 2026-08-01 12:08:06 1
Mind Lab
 
Resource Report
Resource Website
Mind Lab (RRID:SCR_009025) Mind Lab image collection, data or information resource, video resource Interactive laboratory of the mind composed of 4 themed sessions housing four short introductory movies and sixteen trials with those you can experience visual phenomena and illusions used for study in psychological experiments. visual illusion, sensory perception, visual phenomena, psychological experiment, vision has parent organization: Japan Science and Technology Agency nlx_153853 http://jvsc.jst.go.jp/find/mindlab/english/ SCR_009025 JST Virtual Science Center Mind Lab 2026-08-02 09:05:34 0
Virtual brain
 
Resource Report
Resource Website
10+ mentions
Virtual brain (RRID:SCR_002249) tvb simulation software, software resource, software application Simulation software for modeling the entire human brain by combining structural and functional data from empirical neuroimaging data. It can generate local field potentials, EEG, MEG and fMRI BOLD data based on neural mass models. The user can also modify the model parameters to match clinical conditions from focal lesions or degenerative disorders. dti, simulation, modeling, brain is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
has parent organization: University of Toronto; Ontario; Canada
James S. McDonnell Foundation PMID:23442172
PMID:23774395
Free, Freely available nlx_155567 http://www.nitrc.org/projects/tvb SCR_002249 thevirtualbrain.org, The Virtual Brain, thevirtualbrain 2026-08-02 09:03:16 39
Human Brain Project EU
 
Resource Report
Resource Website
50+ mentions
Human Brain Project EU (RRID:SCR_002241) HBP EU, HBP, European HBP, funding resource, organization portal, data or information resource, portal Global, collaborative effort for neuroscience, medicine and computing to understand brain, its diseases and its computational capabilities. Goal is to obtain access to research, data sources, platforms and infrastructures offered by other organisations, and enabling organizations outside HBP to use HBP platforms to pursue their own research. Coordinating these activities is the responsibility of the European Research Programme. brain, ethics, neuroscience, medicine, computing, treatment, brain disease, neuroinformatics, software development, computational modeling, software, connectomics is related to: BigBrain
is related to: Julich-Brain Cytoarchitectonic Atlas
is parent organization of: subcellular application
is parent organization of: Subcellular App
Restricted nlx_155553 SCR_002241 European Human Brain Project 2026-08-02 09:03:28 67
National Genome Research Network
 
Resource Report
Resource Website
10+ mentions
National Genome Research Network (RRID:SCR_006626) NGFN organization portal, data or information resource, portal The program of medical genome research is a large-scale biomedical research project which extends the national genome research net (NGFN) and will be funded by the federal ministry of education and research (BMBF) from 2008-2013. Currently the program includes two fields: * Research ** NGFN-Plus: With the aim on combating diseases that are central to health policy, several hundred researchers are systematically investigating the complex molecular interactions of the human body. They are organized in 26 Integrated Genome Research Networks. * Application ** NGFN-Transfer: The rapid transfer of results from medical genome research into medical and industrial application is the aim of the scientists from research institutes and biomedical enterprises that cooperate in eight Innovation Alliances. AREAS OF DISEASE * Cardiovascular disease * Cancer * Neuronal diseases * Infections and Inflammations * Environmental factors genome, research, gene, disease Cardiovascular disease, Cancer, Neuronal disease, Infectious disease, Inflammation, Disease linked to environment BMBF nlx_151595 SCR_006626 NGFN - National Genome Research Network, German National Genome Research Network 2026-08-02 09:04:43 26
BRAIN Initiative
 
Resource Report
Resource Website
10+ mentions
BRAIN Initiative (RRID:SCR_006770) NIH BRAIN Initiative organization portal, data or information resource, portal Project aimed at revolutionizing understanding of human brain, to show how individual cells and complex neural circuits interact, enable rapid progress in development of new technologies and data analysis tools to treat and prevent brain disorders. BRAIN Initiative encourages collaborations between neurobiologists and scientists from disciplines such as statistics, physics, mathematics, engineering, and computer and information sciences. Institutes and centers contributing to NIH BRAIN Initiative support those research efforts. brain, connectomics, disorder, cell, neural, circuit, neurotechnology, data, repository, analysis uses: Single Cell Portal
recommends: Human Neocortical Neurosolver
recommends: Brain Gene Expression Analysis toolbox
recommends: clusterExperiment
recommends: BioWheel
recommends: iELVis
recommends: Mediation Analysis of Causality under Confounding
recommends: MCell
recommends: microMS
recommends: MIIVsem
recommends: MountainSort
recommends: Myriads
recommends: nelpy
recommends: NetPyNE
recommends: Neural Ideal
recommends: NEURON
recommends: Neuron Tools
recommends: Neuroscience Gateway
recommends: NUTMEG
recommends: PetaVision
recommends: PyNWB
recommends: pyRayleighCuda
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recommends: Scope
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recommends: TReNA
recommends: ALICE
recommends: BioImage Suite
recommends: EyeWire
recommends: GIMME
recommends: GMA
recommends: Homer2
recommends: Brain Image Library
recommends: Data Archive BRAIN Initiative
recommends: OpenNeuro
recommends: Brain Observatory Storage Service and Database (BossDB)
recommends: 1000 Functional Connectomes Project
recommends: FastProject
recommends: Autopatcher
recommends: cytoNet
recommends: DiffuserCam
recommends: gene Expression Analysis Resource
recommends: NeMOarchive
recommends: Distributed Archives for Neurophysiology Data Integration
recommends: NIDA Data Share
recommends: HED Tags
lists: University of North Carolina Neuroscience Center and the BRAIN Initiative Viral Vector Core Facility
is related to: Brain Image Library
is related to: OpenNeuro
is related to: Distributed Archives for Neurophysiology Data Integration
is related to: NeMO Analytics
is related to: Brainome portal
is related to: CEMBA MethylC Seq Pipeline
is related to: Seattle Alzheimer Disease Brain Cell Atlas
is related to: EBRAINS
is related to: Human Brain Variation Project
has parent organization: National Institutes of Health
is parent organization of: Data Archive BRAIN Initiative
is parent organization of: OpenNeuro
is parent organization of: Brain Observatory Storage Service and Database (BossDB)
is parent organization of: Ecosystem for Multi-modal Brain-behavior Experimentation and Research
has organization facet: 3D Developmental Mouse Brain Common Coordinate Framework
Alzheimer's disease, Schizophrenia, Autism, Epilepsy, Traumatic brain injury BRAIN Initiative nlx_155554 http://braininitiative.nih.gov/, http://www.whitehouse.gov/share/brain-initiative, http://en.wikipedia.org/wiki/BRAIN_Initiative SCR_006770 , Brain Research through Advancing Innovative Neurotechnologies Initiative, NIH Brain Research through Advancing Innovative Neurotechnologies Initiative 2026-08-02 09:04:58 18
TCG Life Sciences
 
Resource Report
Resource Website
1+ mentions
TCG Life Sciences (RRID:SCR_010571) organization portal, data or information resource, portal Leading contract research and manufacturing services company in the area of drug discovery and development. commercial organization grid.465113.4, nlx_41588, ISNI: 0000 0004 1768 2407 https://ror.org/030rrcn92 SCR_010571 TCG Life Sciences Biobank 2026-08-02 09:05:44 1
Mayo Alzheimer's Disease Research Center
 
Resource Report
Resource Website
Mayo Alzheimer's Disease Research Center (RRID:SCR_008727) Mayo ADRC organization portal, data or information resource, portal A clinical research department that specializes in the study of Alzheimer's disease. The Mayo Clinic Alzheimer's Disease Research Center conducts many types of research studies related to dementia, as well as normal or successful aging. The purpose of the center is to provide care for dementia patients and promote research and education on Alzheimer's Disease and related dementias. alzheimer's disease, mild cognitive impairment, early dementia, lewy body dementia, dementia, normal control, late adult human, healthy, memory, neuroimaging, department portal has parent organization: Mayo Clinic Florida; Florida; USA
has parent organization: Mayo Clinic Minnesota; Minnesota; USA
is parent organization of: Mayo Clinic Jacksonville: Neuropathology and Microscopy
Aging NIA Public, Available to the research community nlx_144139 http://mayoresearch.mayo.edu/mayo/research/alzheimers_center/index.cfm SCR_008727 Mayo Clinic Alzheimer's Disease Research Center, Mayo Alzheimer's Disease Research Center 2026-08-02 09:05:30 0
NIH StrokeNet
 
Resource Report
Resource Website
NIH StrokeNet (RRID:SCR_014648) data or information resource, portal NIH network designed to follow and help conduct clinical trials and research studies investigating acute stroke treatment, stroke prevention, and stroke recovery and rehabilitation. Clinical trials are listed once they are reviewed, approved, and ready for volunteer recruitment. stroke, network, portal, nigh, clinical trial, acute stroke treatment, stroke prevention, stroke recovery, stroke rehabilitation is affiliated with: Medical University of South Carolina; South Carolina; USA
is affiliated with: University of Cincinnati; Ohio; USA
Public SCR_014648 NIH Strokenet, Strokenet, StrokeNet 2026-08-02 09:06:40 0
Biorepositories and Biospecimens Research Branch
 
Resource Report
Resource Website
1+ mentions
Biorepositories and Biospecimens Research Branch (RRID:SCR_013979) data or information resource, portal BBRB supports medical discovery and precision medicine by providing leadership, tools, and resources to the biobanking community. Provides input on policy related to biobanking and supports the availability of biospecimens for research. Develops standardized procedures for biospecimen science and research; conducts and sponsors research on the effects of biospecimen preanalytical factors; leads and supports major scientific initiatives requiring high-quality biospecimens; and supports investigations into the ethical, legal, and social issues concerning biospecimen collection and use. portal, biospecimen, human biospecimen, cancer, cancer research, database, is listed by: Connected Researchers
is related to: Biospecimen Research Database
is related to: caHUB
is related to: Connected Researchers
has parent organization: National Cancer Institute
cancer Free, Freely available http://biospecimens.cancer.gov/default.asp SCR_013979 , NCI’s Biorepositories and Biospecimen Research Branch (BBRB) 2026-08-02 09:06:39 1
University of Michigan Center for Gastrointestinal Research
 
Resource Report
Resource Website
University of Michigan Center for Gastrointestinal Research (RRID:SCR_015605) UMCGR organization portal, data or information resource, portal Center whose goal is to investigate signal transduction mechanisms regulating homeostasis and GI disorders. Their approach includes studies on genetics and gene regulation, cellular signaling pathways, receptors and ion channels. UMCGR, gastrointestinal research, GI functions, homeostasis, cellular signaling pathway, gene regulation is listed by: NIDDK Information Network (dkNET)
is parent organization of: University of Michigan Center for Gastrointestinal Research Protein Localization, Identification and Folding Core
is parent organization of: University of Michigan Center for Gastrointestinal Research In Vivo Animal and Human Studies Core
is parent organization of: University of Michigan Center for Gastrointestinal Research Molecular Biology Core
is parent organization of: University of Michigan Center for Gastrointestinal Research Microbiome and Metabolomics Core
has organization facet: University of Michigan Center for Gastrointestinal Research Protein Localization, Identification and Folding Core
has organization facet: University of Michigan Center for Gastrointestinal Research In Vivo Animal and Human Studies Core
has organization facet: University of Michigan Center for Gastrointestinal Research Molecular Biology Core
has organization facet: University of Michigan Center for Gastrointestinal Research Microbiome and Metabolomics Core
is organization facet of: Digestive Disease Centers
digestive disease NIDDK P30 DK034933 Available to affiliated researchers SCR_015605 2026-08-02 09:07:10 0
Center for Imaging of Neurodegenerative Diseases
 
Resource Report
Resource Website
Center for Imaging of Neurodegenerative Diseases (RRID:SCR_001968) CIND organization portal, data or information resource, portal Biomedical technology research center that develops and validates new imaging methods for detecting brain abnormalities in neurodegenerative diseases, including Alzheimer's disease, vascular dementia, frontotemporal dementia, Parkinson's disease, as well as epilepsy, depression, and other conditions associated with nerve loss in the brain. As people around the globe live longer, the impact of neurodegenerative diseases is expected to increase further with dire social and economical consequences for societies if no effective treatments are developed soon. The development at CIND is aimed to improve magnetic resonance imaging (MRI). The ultimate goal of the scientific program is to identify imaging markers that improve accuracy in diagnosing neurodegenerative diseases at early stages, achieve more reliable prognoses of disease progression, and facilitate the discovery of effective treatment interventions. In addition to addressing the general needs for studying neurodegenerative diseases, another focus of CIND concerns brain diseases associated with military service and war combat, such as post traumatic stress disorder (PTSD), brain trauma, gulf war illness and the long-term effects of these conditions on the mental health of veterans. The symbiosis between CIND and the Veterans Administration Medical Center in San Francisco makes this program uniquely suited to serve military veterans. Biomedical Technology Research Center, depression, mri, imaging, neuroimaging has parent organization: University of California at San Francisco; California; USA Neurodegenerative disease, Alzheimer's disease, Vascular dementia, Frontotemporal dementia, Parkinson's disease, Epilepsy, Depressive Disorder, Post-Traumatic Stress Disorder, Brain injury, Gulf war illness NIBIB THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-10539 http://www.cind.research.va.gov/index.asp SCR_001968 UCSF Center for Imaging of Neurodegenerative Diseases 2026-08-02 09:03:26 0

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