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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
CompuCell3D
 
Resource Report
Resource Website
50+ mentions
CompuCell3D (RRID:SCR_003052) CC3D software application, simulation software, software resource Open-source simulation environment for multi-cell, single-cell-based modeling of tissues, organs and organisms. It uses Cellular Potts Model to model cell behavior. model, simulation, cellular, multi-cellular, windows, mac os x, linux, tissue, organ, organism, cell behavior has parent organization: Indiana University; Indiana; USA NIH ;
EPA
PMID:22482955 Free, Available for download, Freely available nlx_157668 SCR_003052 2026-08-05 10:43:45 70
NEMO Ontology
 
Resource Report
Resource Website
NEMO Ontology (RRID:SCR_003386) NEMO Ontology data or information resource, ontology, controlled vocabulary Ontology that describes classes of event-related brain potentials (ERP) and their properties, including spatial, temporal, and functional (cognitive / behavioral) attributes, and data-level attributes (acquisition and analysis parameters). Its aim is to support data sharing, logic-based queries and mapping/integration of patterns across data from different labs, experiment paradigms, and modalities (EEG/MEG). eeg, meg, owl, event-related potential, cognitive, behavioral, data sharing, erp is listed by: BioPortal
is related to: NEMO Analysis Toolkit
has parent organization: Neural ElectroMagnetic Ontologies (NEMO) Project
has parent organization: SourceForge
NIH Free, Available for download, Freely available nif-0000-32927 http://purl.bioontology.org/ontology/NEMO, http://sourceforge.net/projects/nemoontologies/ http://nemo.nic.uoregon.edu/wiki/NEMO#NEMO_Ontology SCR_003386 Neural ElectroMagnetic Ontology 2026-08-05 10:43:50 0
Yeast Intron Database
 
Resource Report
Resource Website
1+ mentions
Yeast Intron Database (RRID:SCR_007144) Yeast Intron Database data or information resource, database Database of information about the spliceosomal introns of the yeast Saccharomyces cerevisiae. Listed are known spliceosomal introns in the yeast genome and the splice sites actually used are documented. Through the use of microarrays designed to monitor splicing, they are beginning to identify and analyze splice site context in terms of the nature and activities of the trans-acting factors that mediate splice site recognition. In version 3.0, expression data that relates to the efficiency of splicing relative to other processes in strains of yeast lacking nonessential splicing factors is included. These data are displayed on each intron page for browsing and can be downloaded for other types of analysis. intron, spliceosomal, splicing, genome, intron splice signal, sequence, splice site is listed by: OMICtools
has parent organization: University of California at Santa Cruz; California; USA
W. M. Keck Foundation ;
Packard Foundation ;
NIH
PMID:11988574 The community can contribute to this resource nif-0000-03649, OMICS_01890 http://www.cse.ucsc.edu/research/compbio/yeast_introns.html SCR_007144 Ares lab Yeast Intron Database 2026-08-05 10:44:37 2
CRCView
 
Resource Report
Resource Website
CRCView (RRID:SCR_007092) CRCView data analysis service, production service resource, service resource, analysis service resource Web-based microarray data analysis and visualization system powered by CRC, or Chinese Restaurant cluster, a Dirichlet process model-based clustering algorithm recently developed by Dr. Steve Qin. It also incorporates several gene expression analysis programs from Bioconductor, including GOStats, genefilter, and Heatplus. CRCView also installs from the Bioconductor system 78 annotation libraries of microarray chips for human (31), mouse (24), rat (14), zebrafish (1), chicken (1), Drosophila (3), Arabidopsis (2), Caenorhabditis elegans (1), and Xenopus Laevis (1). CRCView allows flexible input data format, automated model-based CRC clustering analysis, rich graphical illustration, and integrated Gene Ontology (GO)-based gene enrichment for efficient annotation and interpretation of clustering results. CRC has the following features comparing to other clustering tools: 1) able to infer number of clusters, 2) able to cluster genes displaying time-shifted and/or inverted correlations, 3) able to tolerate missing genotype data and 4) provide confidence measure for clusters generated. You need to register for an account in the system to store your data and analyses. The data and results can be visited again anytime you log in. microarray, gene expression, cluster, gene, expression profile, data repository, bio.tools is listed by: bio.tools
is listed by: Debian
is related to: Bioconductor
is related to: Gene Ontology
has parent organization: University of Michigan; Ann Arbor; USA
University of Michigan; Michigan; USA ;
Institutional Fund ;
NIH U013422;
NIAID 1R21AI057875-01
PMID:17485426 Registration required biotools:crcview, nlx_99864 https://bio.tools/crcview http://helab.bioinformatics.med.umich.edu/crcview/ SCR_007092 Chinese Restaurant ClusterView 2026-08-05 10:44:36 0
Add Health (National Longitudinal Study of Adolescent Health)
 
Resource Report
Resource Website
10+ mentions
Add Health (National Longitudinal Study of Adolescent Health) (RRID:SCR_007434) Add Health data or information resource, database Longitudinal study of a nationally representative sample of adolescents in grades 7-12 in the United States during the 1994-95 school year. Public data on about 21,000 people first surveyed in 1994 are available on the first phases of the study, as well as study design specifications. It also includes some parent and biomarker data. The Add Health cohort has been followed into young adulthood with four in-home interviews, the most recent in 2008, when the sample was aged 24-32. Add Health combines longitudinal survey data on respondents social, economic, psychological and physical well-being with contextual data on the family, neighborhood, community, school, friendships, peer groups, and romantic relationships, providing unique opportunities to study how social environments and behaviors in adolescence are linked to health and achievement outcomes in young adulthood. The fourth wave of interviews expanded the collection of biological data in Add Health to understand the social, behavioral, and biological linkages in health trajectories as the Add Health cohort ages through adulthood. The restricted-use contract includes four hours of free consultation with appropriate staff; after that, there''s a fee for help. Researchers can also share information through a listserv devoted to the database. adolescent, longitudinal, adult human, interview, social, behavior, health, early adult human, FASEB list has parent organization: University of North Carolina at Chapel Hill; North Carolina; USA Aging NICHD ;
NCI ;
CDC ;
NIAID ;
NIMHD ;
NIDCD ;
NIGMS ;
NIMH ;
NINR ;
NIA ;
NIAAA ;
NIDA ;
NSF ;
NIH ;
Department of Health and Human Services ;
MacArthur Foundation ;
Robert Wood Johnson Foundation
Restricted use nif-0000-00621 SCR_007434 National Longitudinal Study of Adolescent Health 2026-08-05 10:44:41 37
Human Microbiome Project
 
Resource Report
Resource Website
100+ mentions
Human Microbiome Project (RRID:SCR_012956) HMP, NIH HMP, HMP1 data or information resource, portal, project portal NIH Project to generate resources to characterize the human microbiota and to analyze its role in human health and disease at several different sites on the human body, including nasal passages, oral cavities, skin, gastrointestinal tract, and urogenital tract using metagenomic and traditional approach to genomic DNA sequencing studies.HMP was supported by the Common Fund from 2007 to 2016. generate, resource, human, body, microbiota, analyze, health, disease, metagenomic, DNA, sequesncing, data lists: Pathogen Portal
lists: DNACLUST
lists: QIIME
lists: mothur
lists: Greengenes
lists: Ribosomal Database Project
lists: DeconSeq
lists: FragGeneScan
lists: MetAMOS
lists: MetaPhlAn
lists: MetaPhyler
lists: METAREP
lists: PRINSEQ
lists: TagCleaner
lists: BioCyc
lists: MG-RAST
lists: Core Gene Evaluation Script
lists: IMG System
lists: RAST Server
lists: GINGKO
lists: inVUE
lists: LEfSe
lists: Metastats
lists: MicrobiomeUtilities
lists: Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP
lists: HMPTrees
lists: Simrank
lists: speciateIT
lists: Unifrac
lists: Fast-Unifrac
lists: SitePainter
lists: BMTagger
lists: HUMAnN
lists: Metapath
lists: IMG System
is related to: biobakery
is related to: Integrative Human Microbiome Project
is related to: MicrobiomeDB
is related to: Broad Institute Genomics Platform
has parent organization: National Institutes of Health
is parent organization of: HMP Data Analysis and Coordination Center
NIH nif-0000-25316 https://www.hmpdacc.org/ihmp/, https://www.hmpdacc.org/hmp http://nihroadmap.nih.gov/hmp/ SCR_012956 Human Microbiome Project, NIH HMP, HMP1, HMP, NIH Human Microbiome Project 2026-08-05 10:45:55 385
SegAN
 
Resource Report
Resource Website
1+ mentions
SegAN (RRID:SCR_016215) data processing software, software application, image analysis software, software resource Image analysis software for medical image segmentation. The software is fueled by an end-to-end adversarial neural network that generates segmentation label maps. neural, network, segmentation, pixel, spatial, image, medical, analysis, labelling, loss function, segmentor NIH ;
NLM ;
LHNCBC HHSN276201500692P
Free, Available for download SCR_016215 Semantic Segmentation with Adversarial Learning (SegAN), Semantic Segmentation with Adversarial Learning, SegAN: Semantic Segmentation with Adversarial Learning 2026-08-05 10:46:35 4
Nonhuman Primate Reference Transcriptome Resource
 
Resource Report
Resource Website
10+ mentions
Nonhuman Primate Reference Transcriptome Resource (RRID:SCR_017534) NHPRTR data or information resource, portal, project portal Nonhuman Primate reference transcriptome resource consisting of deep sequencing complete transcriptomes (RNA-seq) from multiple NHP species. Nonhuman, primate, reference, transcriptome, deep, sequencing, RNAseq, data, species NIH Free, Freely available SCR_017534 Nonhuman Primate Reference Transcriptome Resource 2026-08-05 10:46:54 10
Mouse Connectome Project
 
Resource Report
Resource Website
Mouse Connectome Project (RRID:SCR_017313) MCP data or information resource, portal, project portal Project to create complete mesoscale connectivity atlas of the C57Black/6 mouse brain and to subsequently generate its global neural networks. mesoscale, connectivity, atlas, C57Black/6, mouse, brain, neural, network is used by: BICCN
has parent organization: University of Southern California; Los Angeles; USA
NIH Free, Freely available SCR_017313 The Mouse Connectome Project, Mouse Connectome Project 2026-08-05 10:46:53 0
Minimum Information about Biosynthetic Gene cluster
 
Resource Report
Resource Website
50+ mentions
Minimum Information about Biosynthetic Gene cluster (RRID:SCR_023660) MIBiG data or information resource, portal, project portal, database MIBiG is genomic standards consortium project and biosynthetic gene cluster database used as reference dataset. Provides community standard for annotations and metadata on biosynthetic gene clusters and their molecular products. Standardised data format that describes minimally required information to uniquely characterise biosynthetic gene clusters. MIBiG 2.0 is expended repository for biosynthetic gene clusters of known function. MIBiG 3.0 is database update comprising large scale validation and re-annotation of existing entries and new entries. Community driven effort to annotate experimentally validated biosynthetic gene clusters. Genomic standards consortium project, community standard, annotations and metadata standards, biosynthetic gene clusters, sequence framework, biosynthetic gene cluster data, Netherlands Organization for Scientific Research VENI grant ;
NSF CAREER Award ;
UK Biotechnology and Biological Sciences Research Council ;
Novo Nordisk Foundation ;
NIH U41 AT008718;
Danish National Research Foundation ;
NCCIH U24 AT010811;
NCCIH F32 AT011475;
Natural Sciences and Engineering Council of Canada Discovery grant ;
European Union Horizon 2020 projects CARTNET ;
Horizon 2020 Marie Skłodowska-Curie ;
U.S. Department of Energy ;
Portuguese Science and Technology Foundation ;
U.S. National Science Foundation ;
National Research Foundation of Korea ;
NIGMS GM134688;
NIAID R01AI155694;
Netherlands eScience Center Accelerating Scientific Discoveries Grant ;
Funds of the Chemical Industry Germany ;
UK government Department for Environment ;
Food and Rural Affairs ;
German Chemical Industry ;
Natural Sciences and Engineering Council of Canada
PMID:36399496
DOI:10.1093/nar/gkz882
Free, Freely available SCR_023660 MIBiG 3.0, MIBiG 2.0 2026-08-05 10:47:52 55
TeamTat
 
Resource Report
Resource Website
1+ mentions
TeamTat (RRID:SCR_023439) software resource, web application Web based collaborative text annotation tool. Used for managing multi-user, multi-label document annotation. Project managers can specify annotation schema for entities and relations and select annotators and distribute documents anonymously to prevent bias. Document input format can be plain text, PDF or BioC (uploaded locally or automatically retrieved from PubMed/PMC), and output format is BioC with inline annotations. Displays figures from full text. Text annotation, team collaboration, collaborative text annotation, MSIT ;
NIH
PMID:32383756 Free, Freely available https://github.com/ncbi-nlp/TeamTat SCR_023439 2026-08-05 10:47:52 3
Knockout Mouse Project
 
Resource Report
Resource Website
10+ mentions
Knockout Mouse Project (RRID:SCR_005571) KOMP, NIH KOMP data or information resource, portal, project portal Project is providing critical tools for understanding gene function and genetic causes of human diseases. Project KOMP is focused on generating targeted knockout mutations in mouse ES cells. Second phase, KOMP2, relies upon successful generation of strains of knockout mice from these ES cells. Information from JAX about their contributions to KOMP project. Generating, knockout, mutation, mouse, ES cell, embryonic, stem, c57bl/6 is listed by: NIDDK Information Network (dkNET)
is listed by: NIDDK Research Resources
is related to: KOMP2
is related to: KOMP2
is related to: StatPackets
has parent organization: International Knockout Mouse Consortium
has parent organization: National Institutes of Health
is parent organization of: Knockout Mouse Project Repository
is parent organization of: Knockout Mouse Project Repository at JAX
NIH ;
NIH Blueprint for Neuroscience Research
Free, Freely available nlx_145296, SCR_017527 https://grants.nih.gov/grants/guide/rfa-files/rfa-rr-06-005.html http://www.nih.gov/science/models/mouse/knockout/index.html SCR_005571 NIH Knockout Mouse Project, Knock-Out Mouse Project 2026-08-05 10:44:17 10
Mouse Models For Alzheimer's Disease Research
 
Resource Report
Resource Website
1+ mentions
Mouse Models For Alzheimer's Disease Research (RRID:SCR_000708) data or information resource, narrative resource, model An information resource about several models for mice to develop Alzheimer's-related characteristics as they age. alzheimer's, aging, mouse, mice, model, transgenic, research has parent organization: Jackson Laboratory Aging NIH Non-Commercial, Personal Use nif-0000-00183 http://jaxmice.jax.org/research/neurobiology/alzheimers-agedmodels.html, http://research.jax.org/grs/alzheimers.html SCR_000708 MMFADR 2026-08-05 10:43:13 1
Human Nutrition Research Information Management
 
Resource Report
Resource Website
Human Nutrition Research Information Management (RRID:SCR_001471) HNRIM data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022. Database of human nutrition research and research training activities supported by the federal government. Information regarding trends in nutrition research, specific institutions and investigators involved in this research, or areas of agency emphases can be obtained from database searches or from published summary reports. Data for the system is prepared and submitted by participating agencies, and is updated annually. The database contains several thousand projects for each of fiscal years 1985present. Participating agencies include the Department of Health and Human Services, the U.S. Department of Agriculture, the Department of Veteran Affairs, the Agency for International Development, the Department of Defense, Department of Commerce, National Science Foundation, and the National Aeronautics and Space Administration. nutrition is listed by: NIDDK Information Network (dkNET)
is related to: CARDS Database
has parent organization: NIH Division of Nutrition Research Coordination
NIH THIS RESOURCE IS NO LONGER IN SERVICE nlx_152702 SCR_001471 HNRIM System Database, Federal Human Nutrition Research and Information Management (HNRIM) System Database, Federal Human Nutrition Research and Information Management System Database 2026-08-05 10:43:22 0
Deja Vu: a Database of Highly Similar and Duplicate Citations
 
Resource Report
Resource Website
Deja Vu: a Database of Highly Similar and Duplicate Citations (RRID:SCR_002292) data or information resource, database Deja vu is a database of extremely similar Medline citations. Many, but not all, of which contain instances of duplicate publication and potential plagiarism. Deja vu is a dynamic resource for the community, with manual curation ongoing continuously, and we welcome input and comments. In the scientific research community plagiarism and multiple publications of the same data are considered unacceptable practices and can result in tremendous misunderstanding and waste of time and energy. Our peers and the public have high expectations for the performance and behavior of scientists during the execution and reporting of research. With little chance for discovery and decreasing budgets, yet sustained pressure to publish, or without a clear understanding of acceptable publication practices, the unethical practices of duplicate publication and plagiarism can be enticing to some. Until now, discovery has been through serendipity alone, so these practices have largely gone unchecked. duplicate publication, plagiarism, publication Hudson Foundation ;
NIH
nif-0000-02718 SCR_002292 Deja Vu, Deja Vu: a Database of Highly Similar Citations 2026-08-05 10:43:37 0
MPIDB
 
Resource Report
Resource Website
1+ mentions
MPIDB (RRID:SCR_001898) MPIDB data or information resource, database Database that collects and provides all known physical microbial interactions. Currently, 24,295 experimentally determined interactions among proteins of 250 bacterial species/strains can be browsed and downloaded. These microbial interactions have been manually curated from the literature or imported from other databases (IntAct, DIP, BIND, MINT) and are linked to 26,578 experimental evidences (PubMed ID, PSI-MI methods). In contrast to these databases, interactions in MPIDB are further supported by 68,346 additional evidences based on interaction conservation, co-purification, and 3D domain contacts (iPfam, 3did). (spoke/matrix) binary interactions inferred from pull-down experiments are not included. 3d domain, conservation, co-purification, interaction, microbial, protein, microbial interaction, protein interaction, interaction conservation, interaction co-purification, 3d domain contact, protein-protein interaction, microbial protein, microbiology is listed by: re3data.org
is related to: IMEx - The International Molecular Exchange Consortium
is related to: IntAct
is related to: Database of Interacting Proteins (DIP)
is related to: BIND
is related to: MINT
is related to: Interaction Reference Index
is related to: IMEx - The International Molecular Exchange Consortium
is related to: PSICQUIC Registry
has parent organization: J. Craig Venter Institute
J. Craig Venter Institute ;
Indgen Life Technologies ;
NIH ;
NIMH R01GM79710
PMID:18556668 THIS RESOURCE IS NO LONGER IN SERVICE r3d100010673, nif-0000-10467 http://jcvi.org/mpidb/ SCR_001898 The Microbial Protein Interaction Database, Microbial Protein Interaction Database 2026-08-05 10:43:29 5
Harmony
 
Resource Report
Resource Website
100+ mentions
Harmony (RRID:SCR_022206) software resource, data processing software, software application, data analysis software Software R package to project cells into shared embedding in which cells group by cell type rather than dataset specific conditions. Harmony simultaneously accounts for multiple experimental and biological factors. Used for integration of single cell data. cells grouping, cell type, experimental factors, biological factors, single cell data integration is used by: harmonypy NIAID U19 AI111224;
NIH R01 AR063759;
NIH UH2 AR067677;
NIH T32 AR007530
PMID:31740819 Free, Available for download, Freely available SCR_022206 Harmony for immunogenomics 2026-08-05 10:47:38 171
ImageJ
 
Resource Report
Resource Website
10000+ mentions
ImageJ (RRID:SCR_003070) data processing software, image analysis software, software application, software toolkit, software resource, image processing software Open source Java based image processing software program designed for scientific multidimensional images. ImageJ has been transformed to ImageJ2 application to improve data engine to be sufficient to analyze modern datasets. image, data, processing, analysis, datasets, visualization, uses: NeuriteTracer
is used by: Mouse Behavioral Analysis Toolbox
is used by: Focinator
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is listed by: Debian
is listed by: SoftCite
is related to: uManager
is related to: Fiji
is related to: NIH Image
is related to: TrakEM2
is related to: BioVoxxel Toolbox
is related to: Golddigger
is related to: Analyze Complex Roots Tool
is related to: Analyze Spheroid Cell Invasion In 3D Matrix
is related to: PyImageJ
has parent organization: Research Services Branch National Institutes of Mental Health
has plug in: Diffusing Tensor Imaging in Java
has plug in: OrientationJ
has plug in: GRatio for ImageJ
has plug in: BioVoxxel Toolbox
has plug in: WormSizer
has plug in: MultiStackReg
has plug in: Iterative Deconvolve 3D
has plug in: Thunder STORM
has plug in: Whisker tracking macro
has plug in: 3D Roi Manager
has plug in: 3D Objects Counter
has plug in: BoneJ
has plug in: QuickFigures
has plug in: ObjectJ
has plug in: ADAPT
has plug in: DHM Utilities
has plug in: Sholl Analysis
has plug in: nTracer
has plug in: IHC Profiler
has plug in: MicrobeJ
has plug in: AccPbFRET
has plug in: RiFRET
has plug in: JaCoP
has plug in: Cell Counter Plugin for ImageJ
has plug in: Puncta Analyzer
has plug in: SpinalJ
has plug in: ColonyArea
works with: Intensity Ratio Nuclei Cytoplasm Tool
works with: 3D ImageJ Suite
works with: Wound Healing Tool
works with: MorphoLibJ
NINDS ;
NIGMS RC2 GM092519;
Wellcome Trust Strategic Award 095931;
the Laboratory for Optical and Computational Instrumentation ;
the Morgridge Institute for Research ;
NIH ;
NIMH
PMID:22930834
PMID:29187165
DOI:10.1038/nmeth.2089
Free, Available for download, Freely available ascl:1206.013, rid_000070, Q1659584, 2012ascl.soft06013R, nif-0000-30467, SCR_018407 https://imagej.net/ij/, http://rsbweb.nih.gov/ij, https://imagej.nih.gov/ij/download.html, https://imagej.nih.gov/ij/, https://sources.debian.org/src/imagej/, https://imagej.nih.gov/ij/, http://www.nitrc.org/projects/incf_imagej, SCR_003070 Image J, ImageJ - Image Processing and Analysis in Java, ImageJ2, ImageJ 2026-08-05 10:43:45 27070
Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal (AMP-T2D)
 
Resource Report
Resource Website
50+ mentions
Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal (AMP-T2D) (RRID:SCR_003743) AMP T2D, T2DKP data or information resource, data repository, portal, disease-related portal, topical portal, database, storage service resource, service resource Portal and database of DNA sequence, functional and epigenomic information, and clinical data from studies on type 2 diabetes and analytic tools to analyze these data. .Provides data and tools to promote understanding and treatment of type 2 diabetes and its complications. Used for identifying genetic biomarkers correlated to Type 2 diabetes and development of novel drugs for this disease. type 2 diabetes, diabetes, knowledge, portal, database, repository, type II, diabetic, genetic, data, analysis, FASEB list is recommended by: NIDDK Information Network (dkNET)
is recommended by: National Library of Medicine
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
is listed by: Consortia-pedia
is listed by: NIDDK Information Network (dkNET)
is related to: Accelerating Medicines Partnership - Alzheimers
is related to: Accelerating Medicines Partnership - Alzheimers
is related to: Accelerating Medicines Partnership Autoimmune Diseases of Rheumatoid Arthritis and Lupus
is related to: Type 1 Diabetes Knowledge Portal
is related to: Common Metabolic Diseases Knowledge Portal
has parent organization: Foundation for the National Institutes of Health
has parent organization: Accelerating Medicines Partnership
Type 2 diabetes, Diabetes NIH ;
University of Michigan ;
Broad Institute ;
Fundacion Carlos Slim ;
NIDDK
Free, Freely available SCR_014533, nlx_157976 http://www.nih.gov/science/amp/type2diabetes.htm SCR_003743 , AMP Diabetes, AMP, T2D, AMP-T2D, Type 2 Diabetes Knowledge Portal, Accelerating Medicines Partnership Type 2 Diabetes, Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal, The AMP-T2D Knowledge Portal, AMP T2D, AMP Type 2 Diabetes 2026-08-05 10:43:54 79
Cell Type Ontology
 
Resource Report
Resource Website
1+ mentions
Cell Type Ontology (RRID:SCR_004251) CL data or information resource, ontology, controlled vocabulary Ontology designed as a structured controlled vocabulary for cell types. It was constructed for use by the model organism and other bioinformatics databases. It includes cell types from prokaryotes, mammals, and fungi. The ontology is available in the formats adopted by the Open Biological Ontologies umbrella and is designed to be used in the context of model organism genome and other biological databases. cell ontology, ontology repository is listed by: BioPortal
is listed by: Ontology Lookup Service
is related to: CELDA Ontology
is related to: OBO
is related to: Cell Line Knowledge Base
BBSRC ;
MRC ;
NIH ;
NSF DBI-9978564;
NSF PGRP-0321666
PMID:15693950 Free, Freely available nlx_26501 http://purl.bioontology.org/ontology/CL http://cellontology.org, http://www.obofoundry.org/cgi-bin/detail.cgi?id=cell, SCR_004251 cellontology.org, Obo-cell-type, Cell Ontology 2026-08-05 10:44:00 6

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