Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Isolectin GS-IB4 From Griffonia simplicifolia, Alexa Fluor 647 Conjugate Resource Report Resource Website 10+ mentions |
Isolectin GS-IB4 From Griffonia simplicifolia, Alexa Fluor 647 Conjugate (RRID:SCR_014365) | A conjugated form of isolectin B4 for fluorescence identification of non-peptidergic nociceptors in mouse dorsal root ganglia and spinal cord. | isolectin, marker, fluorescence identification, glycoprotein, mouse dorsal root ganglia, mouse spinal cord | Commercial product, Pay for product, For research purposes only | SCR_014365 | 2026-08-01 12:05:11 | 21 | ||||||||||||
|
IITC Incapacitance Meter Resource Report Resource Website |
IITC Incapacitance Meter (RRID:SCR_016143) | resource | Hardware that is used to test and assess pain and inflammation of the hind limbs on mice and rats. Dynamic weight bearing enables the test to be implemented on both limbs, while inflicting less stress on the subject animal. | hardware, equipment, instrument, pain, inflammation, mice, rat, limb | PMID:28326938 | Commercially available | SCR_016143 | The IITC Incapacitance Test Meter, Incapacitance Meter | 2026-08-01 12:05:28 | 0 | |||||||||
|
POLYPHEMUS Resource Report Resource Website 10+ mentions |
POLYPHEMUS (RRID:SCR_010870) | POLYPHEMUS | software resource | R package for comparative analysis of RNA Polymerase II ChIP-Seq profiles by non-linear normalization. | is listed by: OMICtools | PMID:22156059 | OMICS_00468 | SCR_010870 | 2026-08-01 12:04:17 | 12 | |||||||||
|
Central Institute of Mental Health; Mannheim; Germany Resource Report Resource Website |
Central Institute of Mental Health; Mannheim; Germany (RRID:SCR_011144) | CIMH, ZI | institution | An independent public foundation of the State of Baden-Wuerttemberg associated with the University of Heidelberg, that is one of Europe''s premier research institutions dedicated to mental health. The CIMH combines a clinical inpatient (300 beds) and outpatient program in adult psychiatry, addiction, childhood and adolescent psychiatry and psychotherapy with outstanding research facilities, including two dedicated research fMRI scanners (currently 1.5 Ts and 3 Ts, from next summer 2 3 Ts magnets), an 9.4 Ts animal fMRI scanner, high-throughput facilities for genotyping and molecular biology, neuropsychology and an extensive transgenic animal (both mice and rats) and animal behavior assessment facility. |
is related to: EU-AIMS is related to: NEWMEDS |
nlx_158358 | SCR_011144 | Central Institute of Mental Health, Central Institute of Mental Health Mannheim, Zentralinstitut für Seelische Gesundheit | 2026-08-01 12:04:20 | 0 | |||||||||
|
Precision Targeting Lab LLC Resource Report Resource Website |
Precision Targeting Lab LLC (RRID:SCR_011013) | PTL, PTL LLC | commercial organization | THIS RESOURCE IS NO LONGER IN SERVICE, documented on February 3rd, 2022. Provides mouse genetic services. PTL develops proprietary technologies for the production of transgenic and genetically modified mice. One of PTL''s key technologies increases gene targeting frequency from 0%-5% to 30%-60% in mouse ES cells. Improvement in gene targeting frequency speeds up the production process of genetically modified mouse models. This translates into less production cost and faster delivery of our products. Genetically modified mouse models are guaranteed for delivery within 12 months or less with PTL''s full gene targeting services. | is listed by: ScienceExchange | THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_9413 | SCR_011013 | Precision Targeting Lab (PTL) LLC, Precision Targeting Lab | 2026-08-01 12:04:19 | 0 | ||||||||
|
PicTar Resource Report Resource Website 1000+ mentions |
PicTar (RRID:SCR_003343) | PicTar | software resource | An algorithm for the identification of microRNA targets. Details are provided (3' UTR alignments with predicted sites, links to various public databases etc) regarding: # microRNA target predictions in vertebrates (Krek et al, Nature Genetics 37:495-500 (2005)) # microRNA target predictions in seven Drosophila species (Grn et al, PLoS Comp. Biol. 1:e13 (2005)) # microRNA targets in three nematode species (Lall et al, Current Biology 16, 1-12 (2006)) # human microRNA targets that are not conserved but co-expressed (i.e. the microRNA and mRNA are expressed in the same tissue) (Chen and Rajewsky, Nat Genet 38, 1452-1456 (2006)) co-expressed targets | microrna target, microrna, bio.tools, FASEB list |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian is listed by: SoftCite is related to: UCSC Genome Browser has parent organization: Max Delbruck Center for Molecular Medicine; Berlin; Germany |
PMID:15806104 | Free, Available for download, Freely available | OMICS_00411, biotools:pictar, nif-0000-31983 | http://pictar.mdc-berlin.de/, https://bio.tools/pictar | SCR_003343 | 2026-08-01 12:02:20 | 1636 | ||||||
|
BEERS Resource Report Resource Website 10+ mentions |
BEERS (RRID:SCR_005090) | BEERS | software resource | A simulation engine for generating RNA-Seq data that was designed to benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct different isoforms and alternate splicing from RNA-Seq data. By default BEERS simulates either mouse or human paired-end RNA-Seq data modeled on the illumina platform. It starts with a large number of gene models (approx 500K) taken from about ten different published annotation efforts, and then chooses a fixed number of these genes at random (30,000 by default). This avoids biasing for or against any particular set of annotations. BEERS then introduces substitutions, indels, alternate spice forms, sequencing errors, and intron signal. BEERS can also simulate strand specific reads. BEERS does not simulate quality scores. There are four configuration files required, these are available for human and mouse. BEERS can also be configured to use any set of gene models. Pre-built indexes for human refseq are given. Using these indexes will generate a much tamer set of transcripts. BEERS is written in perl. | perl, rna-seq |
is listed by: OMICtools has parent organization: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA |
PMID:21775302 | OMICS_01364 | SCR_005090 | Benchmarker for Evaluating the Effectiveness of RNA-Seq Software (BEERS), Benchmarker for Evaluating the Effectiveness of RNA-Seq Software | 2026-08-01 12:02:54 | 22 | |||||||
|
Allen Institute Resource Report Resource Website 50+ mentions |
Allen Institute (RRID:SCR_005435) | institution | Non profit bioscience research organization in Seattle, Washington dedicated to accelerating research globally and sharing that data within the science community. Allen Institute for Brain Science, Allen Institute for Cell Science, Allen Institute for Immunology, and The Paul G. Allen Frontiers Group are four divisions of this Institute with commitment to open science model within its research institutes. | organization, brain, health, disease, research, human, mouse, dataset, cell, immunology, data, map |
is related to: scrattch taxonomy is parent organization of: Allen Institute for Brain Science is parent organization of: Allen Brain Atlas is parent organization of: Allen Human Reference Atlas, 3D, 2020 is parent organization of: Scrattch.Hicat is parent organization of: COVID-19 Open Research Dataset is parent organization of: CORD-19 Explorer is parent organization of: CellLocator is parent organization of: Allen Mouse Brain Common Coordinate Framework is parent organization of: Common Cell Type Nomenclature is parent organization of: Smart-seq2 Single Nucleus Multi Sample Pipeline is parent organization of: BICCN is parent organization of: Allen Cell and Structure Segmenter is parent organization of: Allen Brain Cell Atlas is parent organization of: BRAIN Initiative Cell Atlas Network is parent organization of: MapMyCells is parent organization of: Genetic Tools Atlas is parent organization of: Annotation Comparison Explorer is parent organization of: BioFile Finder is parent organization of: HMBA Adult Human Brain Atlas is parent organization of: Harmonized Ontology of Mammalian Brain Anatomy (HOMBA) |
nlx_144532, Wikidata:Q24191489, grid.507729.e | https://ror.org/03cpe7c52 | SCR_005435 | The Allen Institute | 2026-08-01 12:02:52 | 55 | ||||||||
|
PeakAnalyzer Resource Report Resource Website 1+ mentions |
PeakAnalyzer (RRID:SCR_001194) | PeakAnalyzer | software resource | A set of standalone software programs for the automated processing of any genomic loci, with an emphasis on datasets consisting of ChIP-derived signal peaks. The software is able to identify individual binding / modification sites from enrichment loci, retrieve peak region sequences for motif discovery, and integrate experimental data with different classes of annotated elements throughout the genome. PeakAnalyzer requires a peak file and a feature annotation file in BED or GTF format. Complete annotation files for the current builds of the human (HG19) and mouse (MM9) genomes are provided with the software distribution. | genome, chip, signal peak, binding site, modification site, enrichment loci, peak region, sequence, motif, chip-seq, chip-chip, c++, java, linux, mac os x, windows, bed, gtf, annotation, r, high-throughput sequencing, chromatin binding, modification loci, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: European Bioinformatics Institute |
PMID:20691053 | Free, Available for download, Freely available | biotools:peakanalyzer, OMICS_02156 | https://bio.tools/peakanalyzer | SCR_001194 | 2026-08-01 12:01:34 | 3 | ||||||
|
Oncotest Resource Report Resource Website 1+ mentions |
Oncotest (RRID:SCR_000489) | Oncotest | commercial organization | A contract research organization (CRO) specializing in preclinical oncology services. As a pioneer in the field of patient derived tumor xenografts (PDX), they provide tailored solutions to the problems faced by preclinical oncology researchers. They assist with the identification of the best drug candidates and the validation of their targets and deliver in-depth bioinformatics analyses, laying the groundwork for the successful planning of clinical trials. Their diverse tumor model collection enables them to recommend the right assays and models to answer their customers' questions. Their AAALAC accredited facilities with IVC system, separate model development unit, large cage capacity of over 14,500 mice and proprietary electronic measurement system with an integrated database and by continuously maintaining important PDX models in mice, they are able to provide the highest standard of testing within a reasonable timeframe. | preclinical, oncology, xenograft |
is related to: PREDECT is related to: Charles River Laboratories |
Cancer, Tumor | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_158264 | SCR_000489 | Oncotest GmbH | 2026-08-01 12:01:23 | 1 | ||||||
|
RNAmotifs Resource Report Resource Website 1+ mentions |
RNAmotifs (RRID:SCR_000263) | RNAmotifs | software resource | Software that evaluates the sequence around differentially regulated alternative exons to identify clusters of short and degenerate sequences, referred to as multivalent RNA motifs. | rna, motif |
is listed by: OMICtools has parent organization: Bitbucket |
OMICS_02287 | https://bitbucket.org/rogrro/rna_motifs | SCR_000263 | rna_motifs, rna motifs | 2026-08-01 12:01:12 | 1 | |||||||
|
Toronto Centre for Phenogenomics Resource Report Resource Website 10+ mentions |
Toronto Centre for Phenogenomics (RRID:SCR_006143) | TCP | institution | The Toronto Centre for Phenogenomics (TCP) is an innovative, scientific collaboration between four research hospitals to operate a centralized, state-of-the-art research-enabling mouse facility. We conduct and support genetic research involving generation of mutant mice, physiological phenotyping, behavioural analysis, imaging, pathology and cryopreservation for storage and distribution. This joint project involving Mount Sinai Hospital, The Hospital for Sick Children, University Health Network and St. Michael''s Hospital pools resources and expertise to achieve excellence and economies of scale. The TCP opened for operations in October 2007. The centre functions as a regional, national and international resource for mouse models of human disease. This 120,000 square foot facility is located at 25 Orde Street, Toronto, and occupies four floors two below ground and two above. It houses specialized laboratories for mouse generation and analysis and, when fully occupied, it will contain approximately 36,000 cages (180,000 mice). The world-renowned scientific staff studies mammalian gene function, identifies genetic components of complex human disease, produces new mouse models of human disease, develops and tests new cell-based and gene-based therapies, and develops technologies for genome manipulation and phenotypic analysis. The TCP offers state-of-the-art mouse holding and facility support services to academic stakeholders and strategic private sector partners. It houses the Centre for Modeling Human Disease (CMHD), the Canadian Mouse Mutant Repository (CMMR), and the Mouse Imaging Centre (MICe) to provide an array of pre-clinical research services to clients. TCP Services * Phenotyping * Genetic Mapping * Pathology * Cryopreservation * Imaging * Genetically Engineered Mouse Models * Mouse Holding and Technical Services | mutant mouse, genetics, phenotyping, behavioral analysis, imaging, pathology, cryopreservation, transgenic, mouse model, gene function, custom breeding, mutant mouse line, mouse husbandry, husbandry, mutant mouse line, embryo, sperm, embryonic stem cell, tissue, cell |
is listed by: One Mind Biospecimen Bank Listing is parent organization of: CMHD - Centre for Modeling Human Disease is parent organization of: CMMR - Canadian Mouse Mutant Repository is parent organization of: MICe - Mouse Imaging Centre |
Human disease | Public: Academic and private sector | grid.421777.0, nlx_151633 | https://ror.org/044xrc068 | SCR_006143 | TCP - Toronto Centre for Phenogenomics, Toronto Centre for Phenogenomics (TCP) | 2026-08-01 12:03:04 | 11 | |||||
|
Transgenic Animal Model Core Resource Report Resource Website 1+ mentions |
Transgenic Animal Model Core (RRID:SCR_000776) | TAMC | biomaterial supply resource, material resource | A service for preparing genetically modified mice and rats for investigators at the University of Michigan. These mice models are typically used to study gene function, gene expression, gene regulation, and for the development of animal models of human disease and gene therapy reagents. TAMC provide access to their micromanipoulation and embryos stem cell workstations along with necessary reagents such as specialized plasmids, embryonic stem (ES) cell lines, FBS, and feeder cells certified for ES cell culture. | trangenic, mouse, modify, reagent, cell, toxigene, micromanipulation, embryo, stem, plasmid, culture, transgene, mouse, disease | has parent organization: University of Michigan; Ann Arbor; USA | NIH Intramural Research Program | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-30059 | SCR_000776 | Transgenic Animal Model Core (TAMC) | 2026-08-01 12:10:32 | 4 | ||||||
|
FANTOM DB Resource Report Resource Website 10+ mentions |
FANTOM DB (RRID:SCR_002678) | FANTOM DB | biomaterial supply resource, material resource | The FANTOM consortium is an international collaborative research project initiated and organized by the RIKEN Omics Science Center. In earlier FANTOM efforts we cloned and annotated 103,000 full-length cDNAs from mouse and distributed them to researchers throughout the world. FANTOM1-3 focused on identifying the transcribed components of mammalian cells. This work improved estimates of the total number of genes and their alternative transcript isoforms in both human and mouse, expanded gene families, and revealed that a large fraction of the transcriptome is non-coding. In addition, with the development of Cap Analysis of Gene Expression (CAGE) FANTOM3 could map a large fraction of transcription start sites and revise our models of promoter structure. This updated web resource provides the previous FANTOM results mapped to current genome builds and presents the results of FANTOM4. In FANTOM4 the focus has changed to understanding how these components work together in the context of a biological network. Using deepCAGE (deep sequencing with CAGE) we monitored the dynamics of transcription start site (TSS) usage during a time course of monocytic differentiation in the acute myeloid leukemia cell line THP-1. This allowed us to identify active promoters, monitor their relative expression and define relevant regions for carrying out transcription factor binding site predictions. Computational methods were then used to build a network model of gene expression in this leukemia and the transcription factors key to its regulation. This work gives the first picture of the wiring between genes involved in acute myeloid leukemia and provides a strategy for identifying key factors that determine cell fates. In addition to the network, FANTOM4 data was used in two additional analyses. The first identified a novel class of short RNAs associated with transcription start sites and the second focused on the role of repetitive element expression in the transcriptome. TOOLS *Genome Browser: graphical display of genomic features, such as promoters, exon structures, H3K9 acetylation, transcription factors positioning on the genome, coupled with gene and promoter activities. *EdgeExpressDB: regulatory interactions, such as transcriptional regulation, post-transcriptional silencing with miRNA, and PPI, coupled with gene and promoter activities. *SwissRegulon: FANTOM4 TF regulation is predicted using Motif Activity Response Analysis (MARA) developed by Erik van Nimwegen at Biozentrum. Follow the link to carry out MARA on your own dataset. *Custom Tracks on the UCSC Genome Browser: FANTOM4 tracks on the UCSC Genome Browser Database. *The RIKEN integrated database of mammals: Integration of FANTOM4 data with other mammalian resources, in particular, produced by RIKEN. | cdna clone, mouse, mouse cdna, human, bio.tools |
is listed by: One Mind Biospecimen Bank Listing is listed by: bio.tools is listed by: Debian is related to: CAGE has parent organization: RIKEN Omics Science Center |
PMID:20211142 | Free, Available for download, Freely available | nif-0000-02833, biotools:fantom | http://fantom3.gsc.riken.jp/, https://bio.tools/fantom | SCR_002678 | FANTOM: Functional Annotation of Mouse, FANTOM2, FANTOM1, Functional Annotation of the Mammalian Genome, FANTOM4, FANTOM3, FANTOM, Functional Annotation of Mouse | 2026-08-01 12:10:33 | 20 | |||||
|
Knockout Mouse Project Repository Resource Report Resource Website 100+ mentions |
Knockout Mouse Project Repository (RRID:SCR_007318) | KOMP Repository | biomaterial supply resource, material resource, organism supplier | Repository of mouse vectors, ES cells, mice, embryos, and sperm generated by NIH KOMP Mutagenesis Project. In addition, KOMP Repository offers services in support of KOMP products, including ES cell microinjection, vector cloning, post-insertional modification of cloned ES cells, cryopreservation, assisted reproduction techniques (IVF, ICSI) and mouse breeding, pathology services, phenotyping services, etc. KOMP Repository is final component of more than $50 million trans-NIH initiative to increase availability of genetically altered mice and related materials. The University of California, Davis (UC Davis) and Children''s Hospital Oakland Research Institute (CHORI) in Oakland, Calif., are collaborating to preserve, protect, and make available about 8,500 types of knockout mice and related products available to research community. Products are generated by two KOMP mutagenesis teams (CSD consortium and Regeneron Inc). All KOMP products generated by CSD consortium and Regeneron are available through KOMP Repository. Notice as of December 19, 2019: Materials from KOMP Repository have been deposited into MMRRC, including all mouse models and mouse embryonic stem cell lines. Eventually www.komp.org will be sunsetting, and IMSR will remove KOMP Repository listings, since they were double listed in MMRRC. MMRRC will contain the most accurate and up to date resource models. | vector, embryonic stem cell, embryo, sperm, germplasm, gene, breeding, mutagenesis, mutation, frozen, cryopreserved, knockout mouse, germline transmission testing, genotyping, in vitro fertilization, intracytoplasmic sperm injection, pathology, pathology service, phenotyping service, phenotype, phenotyping, FASEB list |
is listed by: One Mind Biospecimen Bank Listing is listed by: NIDDK Information Network (dkNET) has parent organization: University of California at Davis; California; USA has parent organization: Childrens Hospital Oakland Research Institute has parent organization: Knockout Mouse Project is provided by: International Mouse Phenotyping Consortium (IMPC) is provided by: Mutant Mouse Resource and Research Center is provided by: CMMR - Canadian Mouse Mutant Repository is provided by: Jackson Laboratory |
Knock out mouse | For research purposes only | nif-0000-00185 | SCR_007318 | UCDavis KOMP Repository Knockout Mouse Project, KOMP Repository Knockout Mouse Project, UC Davis KOMP Repository Knockout Mouse Project | 2026-08-03 09:33:20 | 282 | ||||||
|
NIA Mutant Mouse Aging Colony Handbook Resource Report Resource Website |
NIA Mutant Mouse Aging Colony Handbook (RRID:SCR_007328) | NIA Mutant Mouse Aging Colony | biomaterial supply resource, material resource, organism supplier | THIS RESOURCE IS NO LONGER IN SERVICE, documented on September 09, 2013. Supply aged mutant and transgenic mice for NIH-supported research directly related to the biology of aging. The mice are raised by the NIA's contractor, Taconic Farms, in Specific Pathogen-Free (SPF) barrier facilities. The strains in the mutant mouse aging colony have been donated by the investigators who developed the models, and those investigators are still the legally recognized owners of the intellectual property. A Material Transfer Agreement (MTA) is required to purchase the mice (a one-time requirement per strain). There are restrictions to the use of this colony as described in the MTA. These restrictions include a prohibition against breeding the mice purchased from the NIA Mutant Mouse Aging Colony, agreement that the mice will not be used for commercial purposes, and agreement that the mice and all derivatives will not be transferred to third parties. The restrictions are further spelled out in the MTA. Animals are sold by age, not weight, and ages are stated in 1 month intervals only; all animals born within a calendar month are considered to be the same age, so date of birth (DOB) is given as month/year. All mice are virgins. The mutant mouse aging colony is slated to end in September 2013. Old mice will be available until September 2013 but the availability of young mice will end earlier. Entries of different strains into the mutant mouse aging colony will end at different times, dependent on the lifespan and pattern of use of the strain. Mouse models include: * Snell Dwarf (3623) ??????????????? last entry will be the November 2011 DOB (date of birth) * Ames Dwarf (324) ??????????????? last entry will be the October 2012 DOB * A53T ???????????????????????-synuclein Transgenic (322) ??????????????? last entry will be the December 2012 DOB * GFP Transgenic (317) ??????????????? last entry will be the January 2013 DOB | mouse, elderly, mus, mutant mouse strain, old mouse, mouse model |
is listed by: One Mind Biospecimen Bank Listing is related to: One Mind Biospecimen Bank Listing has parent organization: NIA Scientific Resources |
Aging | NIA | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00207 | http://www.nia.nih.gov/ResearchInformation/ScientificResources/NIAMutantMouseAgingColony/ | SCR_007328 | Mutant Mouse Aging Colony | 2026-08-03 09:33:25 | 0 | ||||
|
RIKEN BioResource Center Resource Report Resource Website 1000+ mentions |
RIKEN BioResource Center (RRID:SCR_003250) | BRC, RIKEN BRC | biomaterial supply resource, material resource, organism supplier | RIKEN BRC contributes to advancement of life science research by collecting, preserving and distributing biological resources such as experimental animals, experimental plants, cultured cell lines, genetic materials (DNA), and associated bioinformatics. The RIKEN BRC develops novel bioresources to promote scientific research and new technologies to increase the value of bioresources, and also to implement effective procedures for the preservation, quality control and usage of bioresources. The RIKEN BRC is working closely with institutions in Japan and abroad. | RIN, Resource Information Network, experimental animal, experimental plant, cultured cell line, dna, animal, plant, cell line, genetic material, virus, gene, cultured cell, embryo, sperm, tissue, organ, seed, cell, recombinant host, bioresource, FASEB list, RRID Community Authority |
is listed by: One Mind Biospecimen Bank Listing is listed by: Resource Information Network is related to: Federation of International Mouse Resources is related to: MGI strains has parent organization: RIKEN Tsukuba Institute; Kansai; Japan is parent organization of: JCM works with: Cellosaurus works with: International Mouse Strain Resource |
PMID:19448331 PMID:34532769 |
Free, Freely available | nif-0000-31407 | SCR_003250 | RIKEN Tsukuba Institute RIKEN BioResource Center | 2026-08-03 09:32:02 | 2208 | ||||||
|
CreZOO Resource Report Resource Website |
CreZOO (RRID:SCR_006132) | CreZOO | biomaterial supply resource, material resource, organism supplier | The CreZOO database is the European virtual repository of Cre and other targeted conditional driver strains. CreZOO is being developed in the context of the CREATE consortium, a core of major European and international mouse database holders and research groups involved in conditional mutagenesis. Its aim is to capture and disseminate extant and new information on Cre driver strains. CreZOO also aims to contribute data to the CREATE portal for worldwide access of related information. All transgenic strains carry detailed information on the promoter, specificity (using Adult Mouse Anatomy terms and Theiler Stages) and expressed gene(s) including IDs and direct links where available. Allele details are also presented, in addition to strain, background and availability (in the form of live mice, cryopreserved embryos or sperm etc) information (including EMMA, MGI, MMRRC etc hyperlinks where available). Handling and genotyping details (in the form of documents or hyperlinks) together with all relevant publications are clearly presented with PMID(s) and direct PubMed links. | cre, gene expression, mouse model, gene function, disease pathology, cre driver strain, cre driver, strain, promoter, allele, inducibility, expression pattern, live mouse, embryo, sperm, embryonic stem cell, promoter, gene, allele |
is listed by: One Mind Biospecimen Bank Listing has parent organization: CREATE has parent organization: BSRC Al. Fleming; East Attica; Greece |
European Union FP7 FP7-HEALTH-2007-223487-CREATE | PMID:22730454 | Database access is free of charge and there are no registration requirements for data querying. | nlx_151616 | SCR_006132 | 2026-08-03 09:32:54 | 0 | ||||||
|
Australian Phenomics Network Resource Report Resource Website 1+ mentions |
Australian Phenomics Network (RRID:SCR_006150) | APN | biomaterial supply resource, material resource, organism supplier | Mouse models for the study of human and animal disease for Australian and international researchers. It has reduced the cost to researchers of accessing mouse models of disease, and provides equipment and expertise to undertake characterization and further research of these models. The APN brought together mouse production, strain storage and pathology capabilities, later extending the core services of the network, and include new services (RNAi and genomics services). Twelve Australian facilities and institutions currently constitute the APN. The APN partners contribute their expertise and infrastructure for the production of mouse models, as well as providing cryopreservation and pathology services. * Walter and Eliza Hall Institute of Medical Research * Monash University * Queensland Institute of Medical Research * Animal Resources Centre * Institute of Medical and Veterinary Science * University of Melbourne * Institute of Molecular Bioscience * Menzies Research Institute * Peter MacCallum Cancer Centre * Australian National University * Western Australian Institute of Medical Research * Centenary Institute In addition, the APN is working with the Atlas of Living Australia to develop a framework for Australia''''s e-science infrastructure to improve the capture, annotation and dissemination of research data. The APN''''s core expertise and infrastructure is also extended by key national and international partnerships. These include the Garvan Institute, the National Institutes of Health (United States), the Wellcome Trust (United Kingdom), and the University of Manitoba (Canada). Services * ES Cell to Mouse: Create a mouse model from embryonic stem cells * RNAi: Screen full genomes to identify novel gene targets * ENU Mutagenesis - Produce chemically-induced mouse models * Pathology - Investigate mouse models using clinical and histopathology * Genomics - Further mouse mutant identification via new discovery pipeline * NHMRC Australian PhenomeBank - a non-profit repository of mouse strains used in Medical Research. | mouse model, pathology, cryopreservation, rnai, genomics, embryonic stem cell, mutation, ethylnitrosourea, enu mutagenesis |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Australian National University; Acton; Australia is parent organization of: NHMRC Australian PhenomeBank |
Human disease, Animal disease | Department of Education Australian Governement ; Australian National Collaborative Research Infrastructure Strategy ; contributions from state governments ; research institutions ; National Health ; MRC |
Public | nlx_151641 | SCR_006150 | Australian Phenomics Network (APN), APN - Australian Phenomics Network | 2026-08-03 09:33:02 | 6 | |||||
|
MouseBook Resource Report Resource Website 10+ mentions |
MouseBook (RRID:SCR_006358) | MouseBook | biomaterial supply resource, material resource, organism supplier | Databases and portal to data and ordering mouse strains from MRC Harwell including mouse stocks in FESA (Frozen Embryo and Sperm Archive), mutants from the mutagenesis screen, the ENU DNA archive, standardized phenotyping procedures, imprinting genes and chromosome anomalies. The portal integrates curated information from the MRC Harwell stock resource, and other Harwell databases, with information from external data resources to provide added value information above and beyond what is available through other routes such as IMSR (International Mouse Stain Resource). MouseBook can be searched either using an intuitive Google-style free text search or using the Mammalian Phenotype Ontology (MP) tree structure. Text searches can be on gene, allele, strain identifier (e.g. MGI ID) or phenotype term and are assisted by automatic recognition of term types and autocompletion of gene and allele names covered by the database. Results are returned in a tabbed format providing categorized results identified from each of the catalogs in MouseBook. Individual results lines from each catalog include information on gene, allele, chromosomal location and phenotype and provide a simple click-through link to further information as well as ordering the strain. The infrastructure underlying MouseBook has been designed to be extensible, allowing additional data sources to be added enabling other sites to make their data directly available through MouseBook. | mutant mouse strain, gene, allele, phenotype, embryonic mouse, embryo, sperm, live, chromosomal location, mutant mouse line, imprint, standard operating procedure, bio.tools |
is listed by: One Mind Biospecimen Bank Listing is listed by: Debian is listed by: bio.tools is related to: MPO |
Motor neuron disease, Chromosomal anomaly | MRC | PMID:19854936 | Public | nlx_152127, biotools:mousebook | https://bio.tools/mousebook | SCR_006358 | Mouse Book | 2026-08-03 09:33:06 | 18 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
