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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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CanEuCre Resource Report Resource Website 1+ mentions |
CanEuCre (RRID:SCR_004159) | CanEuCre | production service resource, material service resource, service resource, biomaterial manufacture | Cre expressing mice under the control of promoters with a design focus on the brain. Each promoter is derived from human sequence, but the resulting expression is assessed in the mouse for the activation of a LacZ reporter gene by the Cre activity. Promoters tested as large MaxiPromoters (BACs inserted into the mouse genome) and MiniPromoters (plasmid-based sequences inserted either into the mouse genome or introduced within AAV viruses). The Cre-related project continues from the Pleiades Promoter Project. Here is the list of genes for which icre/ERT2 mice are currently in development: AGTR1, CARTPT, CLDN5, CLVS2, CRH, GABRA6, HTR1A, HTR1B, KCNA4, KDM5C, MKI67, NEUROD6, NKX6-1, NOV, NPY2R, NR2E1, OLIG2, POU4F2, SLITRK6, SOX1, SOX3, SOX9,, SPRY1, VSX2 | brain, cre, promoter, expression, transcription, mouse, human, adeno-associated virus (aav) |
is related to: Pleiades Promoter Project: Genomic Resources Advancing Therapies for Brain Disorders has parent organization: University of British Columbia; British Columbia; Canada |
GenomeBC | nlx_143587 | SCR_004159 | CanEuCre | 2026-08-04 09:41:04 | 2 | |||||||
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Stanford University, Center for Interdisciplinary Brain Sciences Research Resource Report Resource Website 1+ mentions |
Stanford University, Center for Interdisciplinary Brain Sciences Research (RRID:SCR_004134) | CIBSR | topical portal, portal, data or information resource | The Center for Interdisciplinary Brain Sciences Research (CIBSR) at the Stanford University School of Medicine is dedicated to research that will improve the lives and well-being of individuals with disorders of the brain and improve knowledge of healthy brain and behavioral development. CIBSR research staff are dedicated to identifying biological and environmental risk factors, understanding disease pathophysiology and developmental outcomes, and developing new treatments for neurodevelopmental, neurogenetic and neuropsychiatric disorders of childhood onset. Our research studies are truly multi/interdisciplinary as they bring together experts from the fields of psychiatry, neurology, psychology, computer science, biostatistics and genetics to explore and seek answers for complex questions related to brain-behavior relationships. Active research at CIBSR includes: * Mutlimodal imaging of the brain utilizing anatomical and functional magnetic resonance imaging (MRI), diffusion tensor imaging (DTI) and magnetic resonance spectroscopy (MRS). * Behavioral, cognitive, and physiological assessment to address questions concerning the influence of biological and environmental factors on outcome. * The development of new biological and cognitive-behavioral treatments. * Development of brain image analysis methods and software. | brain, research, child, young human | has parent organization: Stanford University School of Medicine; California; USA | nif-0000-02075 | http://spnl.stanford.edu/index.html | SCR_004134 | Stanford Center for Interdisciplinary Brain Sciences Research | 2026-08-04 09:41:04 | 3 | |||||||
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UAB Alzheimer's Disease Center Resource Report Resource Website |
UAB Alzheimer's Disease Center (RRID:SCR_004305) | ADC, UAB ADC | biomaterial supply resource, brain bank, material resource, tissue bank | The UAB Alzheimer's Disease Center provides comprehensive treatment for Alzheimer's patients while also promoting research for the prevention and cure of Alzheimer's disease and related disorders. The ADC is an interdisciplinary program of scientists working in areas including neurology, psychiatry, genetics, and psychology. The Center provides comprehensive treatment and promotes research for the prevention and/or cure of Alzheimer's disease and other related disorders with memory loss and impaired cognition. A major emphasis of research is the maintenance of a clinical research database comprised of neurological, medical, and neuropsychological test data from participants seen in the ADRC Clinical study since 1999, many of whom have been followed for several years in the study. | brain, alzheimer's disease, mild cognitive impairment, brain donation, clinical research database |
is listed by: One Mind Biospecimen Bank Listing has parent organization: University of Alabama at Birmingham; Alabama; USA |
Alzheimer's disease, Mild Cognitive Impairment, Aging | NIA 1P50 AG16582 | Researchers interested in Alzheimer's disease may access the clinical research data | nlx_143674 | http://main.uab.edu/adc/ http://www.uab.edu/medicine/neurology/alzheimers-disease-center | SCR_004305 | UAB Alzheimer's Disease Center, University of Alabama at Birmingham Alzheimer's Disease Center | 2026-08-04 09:41:07 | 0 | ||||
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BrainNet Europe Resource Report Resource Website 10+ mentions |
BrainNet Europe (RRID:SCR_004461) | BNE | portal, organization portal, data or information resource, consortium | THIS RESOURCE IS NO LONGER IN SERVICE.Documented on July 7, 2022. Consortium of 19 brain banks across Europe with an aim to harmonize neuropathological diagnostic criteria and develop gold standards for quality, safety and ethics standards for brain banking. BrainNet Europe also contributes to research on rare diseases, such as: Pick''s disease or other rare forms of dementia, as well as to questions after the events in the aging brain. Anyone can be a donor - irrespective of disease of the central nervous system or not, because for research purposes, one does not only need tissue samples from ill donors, but also from healthy ones for comparison. | central nervous system, clinical, brain research, brain tissue, brain, tissue, late adult human, brain bank, gold standard, neuropathological diagnosis, tissue handling, safety, quality control, ethics, post mortem, data sharing, tissue sampling, autopsy, microdissection, diagnosis |
is listed by: One Mind Biospecimen Bank Listing is listed by: Consortia-pedia is related to: Medical University of Vienna Institute of Neurology is related to: Human Brain Tissue Bank has parent organization: Ludwig-Maximilians-University; Munich; Germany is parent organization of: BrainNet Europe Sampling Protocols |
Central nervous system disorder, Normal control, Aging, Neurological disease, Psychiatric disease, Pick''s disease, Dementia | European Union FP6 LSHM-CT-2004-503039 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_45326 | SCR_004461 | BrainNet Europe Consortium | 2026-08-04 09:41:09 | 24 | |||||
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Epilepsy Research Ireland Resource Report Resource Website |
Epilepsy Research Ireland (RRID:SCR_004448) | ERI | portal, funding resource, topical portal, disease-related portal, data or information resource | Epilepsy Research Ireland is a non-profit organization (Charity CHY17527), run by a group of volunteers, who are dedicated to find cure for epilepsy by raising awareness and money for research. We can say cure now with much more confidence than we could even 10 years ago because recent advances in genetics, brain imaging and drug therapy, all hold out the promise of that holy grail the cure. We can also say with confidence that you can be part of that push by participating in this new foundation since we have collaborations with doctors and scientists all over Europe, the US and Australia, all of whom share the same goal. Epilepsy research, conducted by Epilepsy Research Ireland, is essential and will deliver benefits across the board. Research planned and already underway by Epilepsy Research Ireland will help develop and improve clinical skills; it will provide a knowledge base to develop new ways to manage and treat epilepsy; it will help in the evaluation of new medical advances. Ultimately we can improve the quality of care and provide greater understanding, better and more accurate diagnosis and more tailored treatments. Ireland is uniquely well-positioned, given its relatively homogenous population to make the goal, of making real discoveries in epilepsy research that will directly improve the lives of people with epilepsy, a realistic one. | epilepsy, brain | nlx_143739 | http://www.epilepsyresearchireland.org/index.php?id=17 | SCR_004448 | 2026-08-04 09:41:08 | 0 | |||||||||
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Repository of molecular brain neoplasia data Resource Report Resource Website 1+ mentions |
Repository of molecular brain neoplasia data (RRID:SCR_004704) | REMBRANDT | data analysis service, portal, analysis service resource, topical portal, production service resource, service resource, database, data or information resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 28,2023. REMBRANDT is a data repository containing diverse types of molecular research and clinical trials data related to brain cancers, including gliomas, along with a wide variety of web-based analysis tools that readily facilitate the understanding of critical correlations among the different data types. REMBRANDT aims to be the access portal for a national molecular, genetic, and clinical database of several thousand primary brain tumors that is fully open and accessible to all investigators (including intramural and extramural researchers), as well as the public at-large. The main focus is to molecularly characterize a large number of adult and pediatric primary brain tumors and to correlate those data with extensive retrospective and prospective clinical data. Specific data types hosted here are gene expression profiles, real time PCR assays, CGH and SNP array information, sequencing data, tissue array results and images, proteomic profiles, and patients'''' response to various treatments. Clinical trials'''' information and protocols are also accessible. The data can be downloaded as raw files containing all the information gathered through the primary experiments or can be mined using the informatics support provided. This comprehensive brain tumor data portal will allow for easy ad hoc querying across multiple domains, thus allowing physician-scientists to make the right decisions during patient treatments., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | gene, genetic, cancer, glioma, tumor, clinical genomics, functional genomics, clinical trial, genomics, gene expression, chromosomal aberration, clinical data, clinical, cellular pathway, gene ontology, molecule, brain, neoplasia, brain tumor, adult, pediatric, child, adolescent, gene expression profile, real time pcr assay, cgh array, snp array, sequence, tissue array, image, proteomic profile, treatment, protocol, molecular data, oncology, data mining, copy number array, gene expression array, secretion, kinase, membrane, gene-anomaly, translational research, personalized medicine, data integration, pathway, cell, phenotype |
is related to: Gene Ontology is related to: Glioma Molecular Dignostic Initiatives has parent organization: National Cancer Institute |
Glioma, Brain cancer, Brain tumor | NCI ; NINDS |
PMID:19208739 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00230 | SCR_004704 | REMBRANDT (Repository of Molecular Brain Neoplasia Data), REMBRANDT - Repository of Molecular Brain Neoplasia Data, REpository for Molecular BRAin Neoplasia DaTa (REMBRANDT) | 2026-08-04 09:41:12 | 2 | ||||
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UK Multiple Sclerosis Tissue Bank Resource Report Resource Website |
UK Multiple Sclerosis Tissue Bank (RRID:SCR_004609) | UK MS Tissue Bank | biomaterial supply resource, brain bank, material resource, tissue bank | Procures brain, spinal cord and other tissues bequeathed by donors and makes them available to scientists investigating the cause and treatment of multiple sclerosis. The Tissue Bank achieves this aim by addressing the following objectives: # Increasing the awareness of the importance of human tissue to research amongst the MS and scientific communities. # Being sensitive to the needs of the tissue donor and responsive to the requirements of scientists when collecting and processing donated tissue. # Making available high quality, well-documented samples of tissue to research scientists working to better understand MS. There are approximately 85 000 people with multiple sclerosis in the United Kingdom. The varied symptoms experienced by all these people result from damage taking place within their brain and spinal cord. Understanding the exact nature of this damage is essential if we are to better treat the condition. Vital information about how the brain and spinal cord are damaged in multiple sclerosis can be obtained by using a multitude of experimental approaches to study the affected tissue from people with MS and ''control'' tissue from people without the disease. The donation of tissue for research is therefore fundamental to furthering our understanding of the causes of multiple sclerosis and to developing more effective treatments for the disease. The UK Multiple Sclerosis Tissue Bank welcomes requests for tissue samples for use in research into the cause and treatment of multiple sclerosis. It has available post mortem, cryopreserved brain and spinal cord tissue both fixed and unfixed, and cerebrospinal fluid from patients with and without a history of multiple sclerosis. Freshly dissected tissue samples, or those preserved using unconventional techniques may also be made available by prior arrangement. | brain, spinal cord, tissue, cerebral spinal fluid, post-mortem |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Imperial College London; London; United Kingdom |
Multiple Sclerosis, Normal control | Multiple Sclerosis Society of Great Britain and Northern Ireland | Public: Available to scientists investigating the cause and treatment of multiple sclerosis. | nlx_60486 | SCR_004609 | 2026-08-04 09:41:11 | 0 | ||||||
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Brain Injury Alliance of Kentucky Resource Report Resource Website |
Brain Injury Alliance of Kentucky (RRID:SCR_004764) | BIAK | portal, patient-support portal, topical portal, disease-related portal, data or information resource | At Brain Injury Alliance of Kentucky (BIAK), a 501(c)(3) non-profit agency, our sole mission is to serve Kentucky citizens whose lives have been affected by brain injury. We do this through advocacy, education, prevention, research, service and support. BIAK links survivors of brain injury and their families to support from others with similar experience; provides them with education and information about living and coping with brain injury; assists them in locating resources for financial assistance; and seeks to connect people with sources of emotional support. BIAK began as an outgrowth of a Lexington area support group in the early 1980s. Family members, medical staff and others felt the need to expand the services and support to reach statewide. The state office was moved to Louisville and incorporated in 1986. BIAK now has offices and staff in Louisville and Lexington. BIAK seeks to share its philosophy, experience and skills with survivors, family members, students, caregivers, administrators, health professionals, legislators, the lay community and all those who desire to make a difference in the life of individuals with brain injuries and their families. At BIAK you will find information about brain injury. We define brain injury as any injury to the brain including injury received from a fall, a stroke, trauma, anoxia, infection, and tumors or other illnesses. Each year, a growing number of Kentucky citizens are affected by brain tumors. These may range from benign tumors to aggressive cancers. The Michael Quinlan Brain Tumor program recently joined BIAK to provide service and support to individuals and families who have been affected by brain tumors. There is always help available to you and your family. | traumatic brain injury, brain injury, human, brain, injury, brain tumor, tumor, concussion, cancer, one mind tbi | nlx_143896 | SCR_004764 | 2026-08-04 09:41:12 | 0 | ||||||||||
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Pediatric Low Grade Astrocytoma Foundation Resource Report Resource Website |
Pediatric Low Grade Astrocytoma Foundation (RRID:SCR_004758) | PLGA Foundation | portal, funding resource, topical portal, disease-related portal, data or information resource | The Pediatric Low Grade Astrocytoma (PLGA) Foundation is the largest, and only, non-profit organization dedicated to providing hope to children, parents, and families fighting Pediatric Low Grade Astrocytomas (PLGAs). We were founded in August 2007, as a 501(c)(3) foundation made up of families and friends dedicated to helping children who are struggling with brain tumors. To date, families associated with the Pediatric Low Grade Astrocytoma (PLGA) Foundation have raised over $6 million for DEDICATED PLGA research and funded over a dozen new research projects targeted specifically at children''s brain tumors or PLGA''s. These funds have supported the launch of the Dana Farber Cancer Institute''s PLGA Research Program as well as numerous grants distributed by the Brain Tumor Society, and other fine institutions. The PLGA Foundation awards 100% of funds to education and research in the search for more effective, less toxic treatment options for this potentially devastating childhood brain tumor. The PLGA Foundation actively promotes partnerships with other non-profit organizations, private individuals and government entities and has collaborated on fund raising, education and grant allocations in order to leverage resources and funds. Our goal at the Pediatric Low Grade Astrocytoma (PLGA) Foundation, also known as Fight Juvenile Pilocytic Astrocytoma (FightJPA.org), is to UNITE families around the country and around the world in the FIGHT for the lives of our children who suffer from PLGAs - childhood brain tumors. We can defeat childhood brain tumors through a united effort on all fronts to increase awareness, education, fundraising and research of pediatric low grade astrocytomas. | brain, cancer, child, human, astrocytoma, pediatric low grade astrocytoma, tumor, pediatric | nlx_143894 | SCR_004758 | Fight Juvenile Pilocytic Astrocytoma | 2026-08-04 09:41:13 | 0 | |||||||||
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celltypes.org Resource Report Resource Website 1+ mentions |
celltypes.org (RRID:SCR_004545) | celltypes.org | atlas, database, data or information resource, image collection | Central repository of information on neuronal cell types mainly accumulating information on: Genetically labeled cell types in mouse brain and genetically engineered mouse lines for cell type research. Mouse lines are annotated with * Atlas for examining transgene expression patterns * Information on construct used to generate transgene * Associated publications * Anatomical regions where transgene is expressed (based on Atlas) * Information on where to obtain the animals Currently, the mouse lines in the database are mostly generated at Cold Spring Harbor Lab, Scripps Research Institute, Baylor College of Medicine and Brandeis University with few other exceptions. In the future, they will incorporate more mouse lines useful for neuronal cell type research. Cell types are annotated with * Anatomical region * Properties (frequently used terms in neuroscience research) * Mouse line used to define the cell type * Genome wide transcriptome data (if available) * Specific (marker) genes (if available) * Marker immunostaining data (if available) * Associated publications * Electrophysiological characterizations (when available) * Morphological characterizations (when available) | mouse, brain, gene expression, cell, neuron, mouse line, molecular neuroanatomy resource, cell type, neuroanatomy, transgene, electrophysiology, morphology | nlx_53797 | SCR_004545 | 2026-08-04 09:41:10 | 2 | ||||||||||
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RLS Foundation Brain Bank Resource Report Resource Website |
RLS Foundation Brain Bank (RRID:SCR_005089) | RLS Foundation Brain Bank | biomaterial supply resource, brain bank, material resource, tissue bank | The Restless Legs Syndrome Foundation established the RLS Foundation Brain Bank at the Harvard Brain Tissue Resource Center in 2000. A part of the Harvard University medical system, the Center (housed at McLean Hospital and commonly referred to as The Brain Bank) began in 1978 as a centralized resource for the collection and distribution of human brain specimens for research and diagnostic studies. Over the years, hundreds of scientists from the nation''s top research and medical centers have requested tissue from The Brain Bank for their investigations. Because most of these studies can be carried out on a very small amount of tissue, each donated brain provides a large number of samples for many researchers. For comparative purposes, brain tissue is needed from healthy individuals, as well as from those who had RLS. When possible, a small portion of frozen tissue taken from each brain donated to the RLS Foundation Collection will be kept available to serve as a resource for future genetic testing. The process of donating your brain to RLS research is broken down into 5 steps. To view these steps, please read our Process Steps in RLS Brain Tissue Collection. To read about the process of donating brain tissue for research, visit our Brain Bank Tissue Donation page. | restless legs syndrome, healthy, normal control, brain tissue, brain, tissue, frozen, quick frozen, passive frozen, formalin fixed, paraffin embedded, post-mortem |
is listed by: One Mind Biospecimen Bank Listing has parent organization: RLS Foundation has parent organization: Harvard Brain Tissue Resource Center has parent organization: Harvard Medical School; Massachusetts; USA |
Restless Legs Syndrome, Healthy, Normal control | Public (non-commercial?): Over the years, Hundreds of scientists from the nation''s top research and medical centers have requested tissue from The Brain Bank for their investigations. | nlx_144146 | SCR_005089 | RLS Foundation Brain Bank Tissue Collection, Restless Legs Syndrome Foundation Brain Bank, RLS Foundation Research Brain Bank | 2026-08-04 09:41:17 | 0 | ||||||
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FlyAtlas: the Drosophila gene expression atlas Resource Report Resource Website 100+ mentions |
FlyAtlas: the Drosophila gene expression atlas (RRID:SCR_005032) | FlyAtlas | expression atlas, atlas, data or information resource | FlyAtlas gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly? For each gene and tissue, you''re given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed). The dataset so far comprises 44 Affymetrix Dros2 expression arrays, each mapping the expression of 18770 transcripts - corresponding to the vast majority of known Drosophila genes. The dataset thus contains over 822800 separate datapoints. This website is intended to make the data easily accessible and comprehensible to mere mortals. FlyAtlas provides the most comprehensive view yet of expression in multiple tissues of Drosophila melanogaster. Meta-analysis of the data shows that a significant fraction of the genome is expressed with great tissue specificity in the adult, demonstrating the need for the functional genomic community to embrace a wide range of functional phenotypes. Well-known developmental genes are often reused in surprising tissues in the adult, suggesting new functions. The homologs of many human genetic disease loci show selective expression in the Drosophila tissues analogous to the affected human tissues, providing a useful filter for potential candidate genes. Additionally, the contributions of each tissue to the whole-fly array signal can be calculated, demonstrating the limitations of whole-organism approaches to functional genomics and allowing modeling of a simple tissue fractionation procedure that should improve detection of weak or tissue-specific signals. | adult, wild-type, canton s, brain, head, eye, thoracicoabdominal ganglion, salivary gland, crop, midgut, hindgut, heart, ovary, fat body, testis, male accessory glands, virgin spermatheca, mated spermatheca spermatheca, carcass, cns, salivary gland, tubule, larval, s2 cells, whole fly |
is related to: OpenFlyData.org has parent organization: University of Glasgow; Glasgow; United Kingdom |
BBSRC | PMID:17534367 | nlx_98284 | SCR_005032 | 2026-08-04 09:41:16 | 112 | |||||||
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Florida Brain Bank Resource Report Resource Website |
Florida Brain Bank (RRID:SCR_004936) | biomaterial supply resource, brain bank, material resource, tissue bank | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 11, 2023. A service and research oriented network of statewide regional brain bank sites. The intent of the brain bank program is to study brains of persons clinically diagnosed with dementia and provide tissue for research after their deaths. Mt. Sinai Medical Center contracts annually with the State of Florida to operate the primary brain bank. Coordinators at regional brain bank sites in Orlando, Tampa and Pensacola assist in recruiting participants and act as liaisons between the brain bank and participant families. Alzheimer's disease respite care program providers, memory disorder clinics, and model day care programs also recruit brain bank participants. The Florida Brain Bank supports collaborative research programs related to Alzheimer's disease and other degenerative disorders of the brain. | post-mortem, tissue, brain, alzheimer's disease, dementia, clinical, mild cognitive impairment, florida, brain bank, degenerative brain disorder |
is listed by: One Mind Biospecimen Bank Listing has parent organization: State of Florida Alzheimer's Disease Initiative has parent organization: Wien Center For Alzheimer's Disease and Memory Disorders |
Alzheimer's disease, Dementia, Mild Cognitive Impairment | State of Florida Department of Elder Affairs | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_143950 | http://elderaffairs.state.fl.us/english/BrainBank/index.php | SCR_004936 | State of Florida Brain Bank, Florida Alzheimer's Disease Brain Bank | 2026-08-04 09:41:15 | 0 | |||||
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Alzheimer's and Dementia Resource Center Resource Report Resource Website 100+ mentions |
Alzheimer's and Dementia Resource Center (RRID:SCR_004924) | ADRC | biomaterial supply resource, brain bank, material resource, tissue bank | The Alzheimer's and Dementia Resource Center (ADRC) facilitates tissue donations for the Brain Bank Research Program in order to help find better treatments, more diagnostic tools and a cure for Alzheimer's disease and dementia. The Brain Bank Program is administered by Mount Sinai Medical Center in Miami Beach and under contract with the Florida Department of Elder Affairs. ADRC also provides caregivers with the educational resources, spiritual comfort and emotional support. The ADRC facilitates training for professional caregivers that meets requirements for the Florida Department of Elder Affairs. | alzheimer's disease, dementia, brain, tissue, brain bank, caregiver, educational resource, patient support | is listed by: One Mind Biospecimen Bank Listing | Alzheimer's disease, Dementia | Public, Registration and pre-registration required to access the brain bank | nlx_143948 | SCR_004924 | alzheimer's disease, tissue, brain, patient support, educational resource, caregiver, dementia, brain bank | 2026-08-04 09:41:15 | 421 | ||||||
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WFU PickAtlas Resource Report Resource Website 1000+ mentions |
WFU PickAtlas (RRID:SCR_007378) | PickAtlas | data processing software, software application, image processing software, software resource | A software toolbox that provides a method for generating Region of Interest (ROI) masks based on the Talairach Daemon database. The atlases include Brodmann area, Lobar, Hemisphere, Anatomic Label (gyral anatomy), and Tissue type. The atlases have been extended to the vertex in MNI space, and corrected for the precentral gyrus anomaly. Additional atlases (including non-human atlases) can be added without difficulty., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | neuroanatomy, cytoarchitecture, fmri, matlab, brain, brain region, talairach daemon, analyze, atlas application, matlab, microsoft, magnetic resonance, posix/unix-like, win32 (ms windows), windows, FASEB list |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Biositemaps is listed by: SoftCite is related to: Talairach Daemon has parent organization: Wake Forest School of Medicine; North Carolina; USA |
NIBIB 1R03EB008670 | PMID:12880848 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00358 | SCR_007378 | WFU_PickAtlas | 2026-08-04 09:41:51 | 1261 | |||||
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Allen Institute Mouse Diversity Study Resource Report Resource Website 1+ mentions |
Allen Institute Mouse Diversity Study (RRID:SCR_008009) | Allen Mouse Diversity | expression atlas, atlas, database, data or information resource | A database, and associated atlas, that characterizes gene expression across genetic backgrounds and sex, expanding beyond the adult male C57BL/6J reference brain comprising the Allen Mouse Brain Atlas to include seven strains of male mice and female C57BL/6J mice. Gene expression was detected using colorimetric RNA in situ hybridization (ISH) that provides cellular level anatomic resolution. ISH data are searchable and organized by gene, strain, or sex. | drug target, gene expression, genetic background, adult, brain, developing, diversity, g protein-coupled receptor, ion channel, mouse, neurotransmitter, rna in situ hybridization, sex, molecular neuroanatomy resource, in situ hybridization, male, female, c57bl/6j, comparison |
is listed by: 3DVC has parent organization: Allen Institute for Brain Science |
Free | nif-0000-08695 | SCR_008009 | Mouse Diversity Study | 2026-08-04 09:42:04 | 1 | |||||||
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Animal Imaging Database Resource Report Resource Website |
Animal Imaging Database (RRID:SCR_008002) | AIDB | image repository, storage service resource, data repository, service resource, database, data or information resource |
THIS RESOURCE IS NO LONGER IN SERVICE, documented May 10, 2017. A pilot effort that has developed a centralized, web-based biospecimen locator that presents biospecimens collected and stored at participating Arizona hospitals and biospecimen banks, which are available for acquisition and use by researchers. Researchers may use this site to browse, search and request biospecimens to use in qualified studies. The development of the ABL was guided by the Arizona Biospecimen Consortium (ABC), a consortium of hospitals and medical centers in the Phoenix area, and is now being piloted by this Consortium under the direction of ABRC. You may browse by type (cells, fluid, molecular, tissue) or disease. Common data elements decided by the ABC Standards Committee, based on data elements on the National Cancer Institute''s (NCI''s) Common Biorepository Model (CBM), are displayed. These describe the minimum set of data elements that the NCI determined were most important for a researcher to see about a biospecimen. The ABL currently does not display information on whether or not clinical data is available to accompany the biospecimens. However, a requester has the ability to solicit clinical data in the request. Once a request is approved, the biospecimen provider will contact the requester to discuss the request (and the requester''s questions) before finalizing the invoice and shipment. The ABL is available to the public to browse. In order to request biospecimens from the ABL, the researcher will be required to submit the requested required information. Upon submission of the information, shipment of the requested biospecimen(s) will be dependent on the scientific and institutional review approval. Account required. Registration is open to everyone.. Documented October 4, 2017. A sub-project of the Cell Centered Database (http://ccdb.ucsd.edu) providing a public repository for animal imaging data sets from MRI and related techniques. The public AIDB website provides the ability for browsing, visualizing and downloading the animal subjected MRI data. The AIDB is a pilot project to serve the current need for public imaging repositories for animal imaging data. The Cell Centered Database (CCDB) is a web accessible database for high resolution 2D, 3D and 4D data from light and electron microscopy. The AIDB data model is modified from the basic model of the CCDB where microscopic images are combined to make 2D, 3D and 4D reconstructions. The CCDB has made available over 40 segmented datasets from high resolution magnetic resonance imaging of inbred mouse strains through the prototype AIDB. These data were acquired as part of the Mouse BIRN project by Drs. G. Allan Johnson and Robert Williams. More information about these data can be found in Badea et al. (2009) (Genetic dissection of the mouse CNS using magnetic resonance microscopy - Pubmed: 19542887) |
reconstruction, segmentation, mri, microscopy, brain, magnetic resonance microscopy |
is related to: Integrated Manually Extracted Annotation has parent organization: Cell Centered Database |
THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-07736 | SCR_008002 | 2026-08-04 09:42:01 | 0 | ||||||||
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Dana Foundation: BrainWeb Resource Report Resource Website |
Dana Foundation: BrainWeb (RRID:SCR_007996) | portal, patient-support portal, topical portal, disease-related portal, data or information resource | BrainWeb provides information and links to validated sites about brain diseases and disorders. These include outside resources reviewed by scientific advisers, as well as articles in Dana publications. Sites listed in BrainWeb detail common brain diseases and disorders, and include general neuroscience and health resources. They offer descriptions of conditions, frequently asked questions, organization contacts, and sources for more information. BrainWeb and its links are suitable for lay readers, including students and educators, as well as people with brain disorders, their families, and caregivers. | alzheimer’s, disease related portal, patient support portal, brain, human, brain disease, brain disorder, general neuroscience, health resource, lay man | has parent organization: Dana Foundation | Aging | Available to the research community, Available for students and educators, Available to patients and caregivers | nif-0000-07310 | SCR_007996 | BrainWeb, Dana Foundation: BrainWeb, The Dana Foundation: BrainWeb | 2026-08-04 09:42:00 | 0 | |||||||
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Connectionist Models of Cognitive, Affective, Brain, and Behavioral Disorders Resource Report Resource Website |
Connectionist Models of Cognitive, Affective, Brain, and Behavioral Disorders (RRID:SCR_008088) | portal, community building portal, data or information resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented August 23, 2016. This site aims to provide a discussion and source list for connectionist and neural network models of disorders associated with mental or brain conditions. Recent connectionist and neural network models of behavior, information processing patterns, and brain activity present in people with cognitive, affective, brain, and behavioral disorders are reviewed on this web site. Ways that assumptions regarding normal and disordered behavior may be represented in connectionist models are discussed for features of various disorders. Similarities and differences between the models and criteria for their evaluation are presented, and suggestions for inclusion of information which may help to make these models more directly comparable in the future are considered. References to Connectionist Models of Cognitive, Affective, Brain, and Behavioral Disorders include: General Neural Network Information Reviews, General Introductions, and Calls for More Connectionist Models of Mental Disorders Models of Psychopathologies and Psychiatric Disorders Models of Cognitive, Affective, Brain, and Behavioral Disorders Not Associated with Psychopathology Additionally, Web Sites for Neural Network Modelers of Disorder are provided. | affective, articles, behavior, behavioral disorders, bibliographies, brain, brain activity, cognitive, connectionist, disordered, disorders, human, information processing, keywords: connectionist, mental, models, neural network, normal, psychopathologies, research labs | has parent organization: Carnegie Mellon University; Pennsylvania; USA | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-10775 | SCR_008088 | Brain, Connectionist Models of Cognitive, Affective, and Behavioral Disorders | 2026-08-04 09:42:05 | 0 | ||||||||
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Allen Human Brain Atlas: BrainSpan (Atlas of the Developing Brain) Resource Report Resource Website 100+ mentions |
Allen Human Brain Atlas: BrainSpan (Atlas of the Developing Brain) (RRID:SCR_008083) | BrainSpan | expression atlas, reference atlas, atlas, data or information resource | Atlas of developing human brain for studying transcriptional mechanisms involved in human brain development. Consists of RNA sequencing and exon microarray data profiling up to sixteen cortical and subcortical structures across full course of human brain development, high resolution neuroanatomical transcriptional profiles of about 300 distinct structures spanning entire brain for four midgestional prenatal specimens, in situ hybridization image data covering selected genes and brain regions in developing and adult human brain, reference atlas in full color with high resolution anatomic reference atlases of prenatal (two stages) and adult human brain along with supporting histology, magnetic resonance imaging (MRI) and diffusion weighted imaging (DWI) data. | anatomic, gene expression, molecular neuroanatomy, in situ hybridization, human, medial prefrontal cortex, primary visual cortex, hippocampus, amygdala, ventral striatum, postnatal, development, brain development, transcription, brain, rna sequencing, exon microarray, developmental stage, male, female, mrna transcript, developing human, adult human, fetal brain, fetus, histology, transcriptome, magnetic resonance imaging, diffusion tensor imaging, annotation, neuroanatomy, prenatal, development, fiber tract, microarray, mri, dti, methylation, microrna, mrf |
is used by: BICCN is related to: NIH Blueprint NHP Atlas is related to: Allen Developing Mouse Brain Atlas is related to: Developmental Human Brain Atlas Ontology (DHBA) is related to: Developing Human Brain Atlas version 2 (DHBAv2) has parent organization: Allen Institute for Brain Science is parent organization of: BrainSpan is parent organization of: BrainSpan |
Neurodevelopmental disorder, Neuropsychiatric disease, Schizophrenia, Epilepsy, Parkinson's disease, Alzheimer's disease, Neurological disease, Autism | NIMH RC2 MH089921; NIMH RC2 MH090047; NIMH RC2 MH089929 |
Free, Freely available | nif-0000-10626 | http://www.developinghumanbrain.org/ | SCR_008083 | BrainSpan - Atlas of the Developing Human Brain, BrainSpan: Atlas of the Developing Human Brain, NIMH Transcriptional Atlas of Human Brain Development | 2026-08-04 09:42:01 | 398 |
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