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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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MITK Diffusion Resource Report Resource Website 1+ mentions |
MITK Diffusion (RRID:SCR_006846) | MITK-DI | data processing software, source code, software resource, software application, image processing software, image analysis software, data visualization software, software toolkit | A selection of image analysis algorithms for the processing of diffusion-weighted MR images. Features & Highlights * Tensor and q-ball reconstruction * Glyph visualization * Quantification and partial volume clustering of tensor and q-ball images * Global fiber tractography, visualization, and tract post-processing * Brain network statistics and visualization (connectomics) * Interactive exploration of Tract-based spatial statistics (TBSS) results * Intra-voxel incoherent motion (IVIM) estimation * Synthetic data generation Additional system specific requirements: * Windows: If you have problems running the Windows application, please install the Microsoft Redistributable Packages for VS 2008: 32 bit or 64 bit * Linux: the Qt framework, version 4.6.2 or later Tested systems: Windows 7, Windows Vista; Ubuntu 12.04 and newer; OS X 10.6 (Snow Leopard), OS X 10.8 (Mountain Lion) The OS X 10.6 installer is compatible with OS X 10.7 (Lion) so there is no dedicated disk image build under 10.7. The MITK Diffusion application is based on the MITK research platform and the most of it is open-source. The available code is embedded into the source code of MITK as a module and can be accessed through the public git repository. | tractography, diffusion tensor imaging, q-ball imaging, diffusion mri, data processing, analysis, visualization, connectomics, fiber tractography, tract post processing, glyph visualization, tensor reconstruction, q-ball reconstruction, scalar index, connectivity analysis, image reconstruction, modeling, quantification, segmentation, fiber tracking, macos, windows, os independent, linux, c++, dicom, nifti-1, nrrd, other format |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: Diffusion MRI of Traumatic Brain Injury has parent organization: German Cancer Research Center |
PMID:23038239 | Most of it, Simplified BSD License | nlx_153917 | http://www.nitrc.org/projects/mitk-diffusion | SCR_006846 | MITK Diffusion Imaging | 2026-08-04 09:41:43 | 3 | |||||
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BrainVoyager Brain Viewer Resource Report Resource Website |
BrainVoyager Brain Viewer (RRID:SCR_006755) | data processing software, data visualization software, software application, software resource | Software that supports browsing and inspecting essential BrainVoyager data files as well as the header and content of DICOM files. The Viewer supports standard image files (JPEG, GIF, PNG, TIFF, BMP) allowing to inspect snapshots, figures or photos. Users can prepare a folder with selected data of a subject (VMRs, SRFs, Maps, snapshot images), which allows participants of fMRI measurements to browse their brain data and to show it to others. The Viewer can be handed over to colleagues not having a BrainVoyager license together with relevant data. This will allow them to view and explore your analyzed data files. | dicom, brainvoyager, jpeg, gif, png, tiff, bmp, image, c++, ct, dicom, microsoft, magnetic resonance, pet, spect, visualization, win32 (ms windows), windows, windows xp |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Brain Innovation: Home of the BrainVoyager Product Family |
Free, Available for download | nlx_144321 | http://www.nitrc.org/projects/bvviewer | SCR_006755 | BranVoyager, BV Brain Viewer | 2026-08-04 09:41:41 | 0 | |||||||
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DW-MRI Random Walk Simulator Resource Report Resource Website |
DW-MRI Random Walk Simulator (RRID:SCR_006652) | DW-MRI Random Walk Simulator | simulation software, software application, software resource | A simple interface to simulate Brownian motion in arbitrary, complex environments. The analysis routines enable visualization of these models with DTI, q-space, and higher order diffusion weighted MRI. | java, macos, matlab, microsoft, modeling, monte carlo, magnetic resonance, posix/unix-like, random walk, simulation, dti, q-space, diffusion weighted mri |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: INCF Software Center |
GNU Lesser General Public License | nlx_155873 | http://www.nitrc.org/projects/randomwalks | SCR_006652 | 2026-08-04 09:41:38 | 0 | |||||||
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MABMIS: Multi-Atlas Based Multi-Image Segmentation Resource Report Resource Website |
MABMIS: Multi-Atlas Based Multi-Image Segmentation (RRID:SCR_006975) | MABMIS | segmentation software, data processing software, software resource, software application, image analysis software | This software package implements an algorithm for accurate and consistent segmentation / labeling on a group of images. The images should be in Analyze format with paired header and image files. All images should be preprocessed so that they have been affinely aligned together. | magnetic resonance, analyze, groupwise registration, label, atlas |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: University of North Carolina at Chapel Hill School of Medicine; North Carolina; USA |
PMID:21807102 | Free, For academic research purposes, Http://bric.unc.edu/ideagroup/free-softwares/ | nlx_155790 | http://www.nitrc.org/projects/mabmis | SCR_006975 | Multi-Atlas Based Multi-Image Segmentation, MABMIS: Multi-Atlas Based Segmentation | 2026-08-04 09:41:43 | 0 | |||||
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MRtrix Resource Report Resource Website 100+ mentions |
MRtrix (RRID:SCR_006971) | MRtrix | data processing software, source code, software resource, software application, software toolkit | A set of tools to perform diffusion-weighted MRI white matter tractography in the presence of crossing fibres, using Constrained Spherical Deconvolution (Tournier et al.. 2004; Tournier et al. 2007), and a probabilisitic streamlines algorithm (e.g. Behrens et al., 2003; Parker et al., 2003). These applications have been written from scratch in C++, using the functionality provided by the GNU Scientific Library, and gtkmm. The software is currently capable of handling DICOM, NIfTI and AnalyseAVW image formats, amongst others. Installation * Unix/Linux * Microsoft Windows * Mac Os X, THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | white matter tractography, diffusion mri, tractography, fiber tracking, crossing fiber, constrained spherical deconvolution, diffusion mr fiber tracking, image display, dti, linux, c++, analyze, bshort, bfloat, dicom, nifti-1, magnetic resonance |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Debian is related to: Diffusion MRI of Traumatic Brain Injury is related to: neurodebian has parent organization: Florey Institute of Neuroscience and Mental Health; Victoria; Australia |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_153918 | http://www.nitrc.org/projects/mrtrix/, https://sources.debian.org/src/mrtrix/ | SCR_006971 | 2026-08-04 09:41:43 | 205 | |||||||
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VAMCA Resource Report Resource Website |
VAMCA (RRID:SCR_007028) | VAMCA | data processing software, data visualization, software resource, software application, image analysis software, software toolkit | A stand-alone, open source human cortical meta-analysis and visualization toolbox for MatLab. It projects stereotaxic coordinates to a mean cortical surface by using an anatomical database of 60 young adults to provide multiple mappings of normalized cortical surfaces into MNI space. VAMCA performs the following analyses: # Multi-Fiducial Projection Mapping: Map stereotaxic 3D coordinates to the normalized cortical location for each of 60 database subjects. # Computing Centroid Locations for groups of foci both on a mean cortical surface and in MNI space. # Comparing Two Groups of Foci for differences in location (surface or 3D) of their group centroids and computing the groups' overlap extent using permutation tests. # Detecting Significant Densities of Foci or Density Differences of Two Groups within anatomical ROIs on a mean cortical surface by using Monte Carlo analyses. Coordinate weights allow fixed or random effects type analyses. | database application, linux, matlab, microsoft, magnetic resonance, posix/unix-like, visualization, windows, windows 95/98/2000, windows nt/2000, windows xp, mni, adult human |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: University of California at Davis; California; USA |
Creative Commons Attribution License | nlx_156010 | http://www.nitrc.org/projects/vamca | SCR_007028 | VAMCA: Visualization And Meta-analysis on Cortical Anatomy, VAMCA Cortical Meta-analysis Toolbox, Visualization And Meta-analysis on Cortical Anatomy | 2026-08-04 09:41:45 | 0 | ||||||
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BrainMaps.org Resource Report Resource Website 50+ mentions |
BrainMaps.org (RRID:SCR_006878) | BrainMaps | image repository, storage service resource, data repository, service resource, atlas, data or information resource | An interactive multiresolution brain atlas that is based on over 20 million megapixels of sub-micron resolution, annotated, scanned images of serial sections of both primate and non-primate brains and integrated with a high-speed database for querying and retrieving data about brain structure and function. Currently featured are complete brain atlas datasets for various species, including Macaca mulatta, Chlorocebus aethiops, Felis catus, Mus musculus, Rattus norvegicus, Tyto alba and many other vertebrates. BrainMaps is currently accepting histochemical, immunocytochemical, and tracer connectivity data, preferably whole-brain. In addition, they are interested in EM, MRI, and DTI data. | aves, brain connection, callicebus moloch, c. auratus, connectivity, monodelphis, o. anatinus, tachyglossidae, brain mapping, virtual microscopy, brain atlas, non-primate, nissl stain, nissl, parvalbumin, smi-32, acetylcholinesterase, luxol fast blue, calbindin, myelin, neuroanatomy, image, brain structure, brain function, database, serial section, brain, tract tracing, coronal, horizontal, sagittal, web service, gene, FASEB list |
is used by: NIF Data Federation is used by: Integrated Datasets is used by: Integrated Nervous System Connectivity is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: University of California at Davis; California; USA |
NIMH 2 P20 MH60975; NIMH R01 MH77556 |
PMID:17229579 | Acknowledgement requested | nif-0000-00093, r3d100012117 | http://www.nitrc.org/projects/brainmaps, https://doi.org/10.17616/R3Q64W | SCR_006878 | BrainMaps: An Interactive Multiresolution Brain Atlas, BrainMaps.org: High Resolution Brain Atlases, BrainMaps | 2026-08-04 09:41:42 | 78 | ||||
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PRoNTo Resource Report Resource Website 100+ mentions |
PRoNTo (RRID:SCR_006908) | PRoNTo | data processing software, software resource, software application, image analysis software, data analytics software, software toolkit | A software toolbox based on pattern recognition techniques for the analysis of neuroimaging data. Statistical pattern recognition is a field within the area of machine learning which is concerned with automatic discovery of regularities in data through the use of computer algorithms, and with the use of these regularities to take actions such as classifying the data into different categories. In PRoNTo, brain scans are treated as spatial patterns and statistical learning models are used to identify statistical properties of the data that can be used to discriminate between experimental conditions or groups of subjects (classification models) or to predict a continuous measure (regression models). | reusable library, clinical neuroinformatics, matlab, magnetic resonance, nifti, os independent, pet, spect, neuroimaging, pattern recognition |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: University College London; London; United Kingdom |
GNU General Public License | nlx_155916 | http://www.nitrc.org/projects/pronto | SCR_006908 | PRoNTo (Pattern Recognition for Neuroimaging Toolbox), Pattern Recognition for Neuroimaging Toolbox, PRoNTo - Pattern Recognition for Neuroimaging Tool | 2026-08-04 09:41:42 | 196 | ||||||
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NIH Human Connectome Project Resource Report Resource Website 10+ mentions |
NIH Human Connectome Project (RRID:SCR_006942) | HCP | portal, organization portal, data or information resource, consortium | Project to map the neural pathways that underlie human brain function for several modalities of neuroimaging data including fMRI. The purpose of the Project is to acquire and share data about the structural and functional connectivity of the human brain. It will greatly advance the capabilities for imaging and analyzing brain connections, resulting in improved sensitivity, resolution, and utility, thereby accelerating progress in the emerging field of human connectomics. Altogether, the Human Connectome Project will lead to major advances in the understanding of what makes us uniquely human and will set the stage for future studies of abnormal brain circuits in many neurological and psychiatric disorders. The sixteen institutes and centers of the NIH Blueprint for Neuroscience have funded two major grants that will take complementary approaches to deciphering the brain's amazingly complex wiring diagram. An 11-institution consortium led by Washington University in St. Louis and the University of Minnesota received a 5-year grant to enable development and utilization of advanced Magnetic Resonance Imaging (MRI) methods to chart brain circuitry. A consortium led by Massachusetts General Hospital and the University of California at Los Angeles received a grant to enable building and refining a next-generation 3T MR scanner that improves the quality and spatial resolution with which brain connectivity data can be acquired at this field strength. | brain, function, neural pathway, connectivity, human, community, data resource, eeg, meg, electrocorticography, funding resource, hardware, imaging genomics, knowledge environment, magnetic resonance, software, fmri |
is used by: DataLad is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: NIH Data Sharing Repositories is related to: NIH Data Sharing Repositories is related to: BCBtoolkit has parent organization: National Institutes of Health is parent organization of: MGH-USC Human Connectome Project is parent organization of: Human Connectome Coordination Facility |
NIH Blueprint for Neuroscience Research | nlx_143921 | http://www.nitrc.org/projects/hcp | SCR_006942 | Human Connectome Project, Human Connectome Project (HCP) | 2026-08-04 09:41:44 | 13 | ||||||
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Whole Brain Catalog Resource Report Resource Website 1+ mentions |
Whole Brain Catalog (RRID:SCR_007011) | WBC | simulation software, image repository, storage service resource, software resource, software application, data repository, service resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented May 26, 2016. An open source, downloadable, 3d atlas of the mouse brain and its cellular constituents that allows multi-scale data to be visualized in a seamless way, similar to Google earth. Data within the Catalog is marked up with annotations and can link out to additional data sources via a semantic framework. This next generation open environment has been developed to connect members of the neuroscience community to facilitate solutions for today's intractable challenges in brain research through cooperation and crowd sourcing. The client-server platform provides rich 3-D views for researchers to zoom in, out, and around structures deep in a multi-scale spatial framework of the mouse brain. An open-source, 3-D graphics engine used in graphics-intensive computer gaming generates high-resolution visualizations that bring data to life through biological simulations and animations. Within the Catalog, researchers can view and contribute a wide range of data including: * 3D meshes of subcellular scenes or brain region territories * Large 2D image datasets from both electron and light level microscopy * NeuroML and Neurolucida neuronal reconstructions * Protein Database molecular structures Users of the Whole Brain Catalog can: * Fit data of any scale into the international standard atlas coordinate system for spatial brain mapping, the Waxholm Space. * View brain slices, neurons and their animation, neuropil reconstructions, and molecules in appropriate locations * View data up close and at a high resolution * View their own data in the Whole Brain Catalog environment * View data within a semantic environment supported by vocabularies from the Neuroscience Information Framework (NIF) at http://www.neuinfo.org. * Contribute code and connect personal tools to the environment * Make new connections with related research and researchers 5 Easy Ways to Explore: * Explore the datasets across multiple scales. * View data closely at high resolution. * Observe accurately simulated neurons. * Readily search for content. * Contribute your own research. | crowd sourcing, mouse, brain, cell, neuron, simulation, microscopy, neuroscience, electron microscopy, light microscopy, bioinformatics, neuroinformatics, computational biology, biology, visualization, animation, molecular structure, neuronal reconstruction, subcellular, annotation |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Biositemaps is related to: NeuroLex is related to: Cell Centered Database is related to: Neuroscience Information Framework is related to: INCF Software Center has parent organization: University of California at San Diego; California; USA is parent organization of: Whole Brain Catalog Blog is parent organization of: WholeBrainCatalog's Channel - YouTube |
Waitt Family Foundation | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-23345 | http://www.nitrc.org/projects/incf_whole-brai | SCR_007011 | 2026-08-04 09:41:45 | 5 | ||||||
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Monte Carlo eXtreme Resource Report Resource Website 1+ mentions |
Monte Carlo eXtreme (RRID:SCR_007001) | MCX | simulation software, software application, software resource | A Monte Carlo simulation software for photon migration in 3D turbid media. It uses Graphics Processing Units (GPU) based massively parallel computing techniques and is extremely fast compared to the traditional single-threaded CPU-based simulations. Using an nVidia 8800GT graphics card (14MP/114Cores), the acceleration is about 300x~400x compared to a single core of Xeon 5120 CPU; this ratio can be as high as 700x with a GTX 280 GPU and 1400x with a GTX 470. | c, console (text based), macos, microsoft, modeling, monte carlo, optical imaging, other programming language, posix/unix-like, win32 (ms windows), windows |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: SourceForge |
GNU General Public License | nlx_155817 | http://www.nitrc.org/projects/mcextreme | SCR_007001 | Monte Carlo eXtreme (MCX) | 2026-08-04 09:41:44 | 2 | ||||||
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Function BIRN Resource Report Resource Website 1+ mentions |
Function BIRN (RRID:SCR_007291) | FBIRN | topical portal, portal, data or information resource | The FBIRN Federated Informatics Research Environment (FIRE) includes tools and methods for multi-site functional neuroimaging. This includes resources for data collection, storage, sharing and management, tracking, and analysis of large fMRI datasets. fBIRN is a national initiative to advance biomedical research through data sharing and online collaboration. BIRN provides data-sharing infrastructure, software tools, strategies and advisory services - all from a single source. | fmri, 3d model, data storage, imaging, map, morphology, mri, neuroinformatics, segmentation, software, talairach, volume, warping, analyze, application, c++, csh/tcsh, data, database, database application, data resource, dicom, javascript, linux, magnetic resonance, nifti, ontology, pl/sql, posix/unix-like, python, quality metrics, spatial transformation, statistical operation, tcl/tk, unix shell, visualization, web resource, web service, workflow |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Biomedical Informatics Research Network is parent organization of: BXH/XCEDE Tools is parent organization of: FBIRN Image Processing Scripts |
NIGMS ; NCRR 1U24-RR025736; NCRR U24-RR021992; NCRR U24-RR021760; NCRR 1U24-RR026057-01 |
nif-0000-00070 | http://www.nitrc.org/projects/fbirn | http://nbirn.net/tools/browse_tools.shtm | SCR_007291 | Functional Imaging BIRN | 2026-08-04 09:41:49 | 2 | |||||
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ASA - Advanced Source Analysis Resource Report Resource Website 1+ mentions |
ASA - Advanced Source Analysis (RRID:SCR_012867) | ASA | data processing software, software resource, software application, image processing software, image analysis software | A highly flexible EEG/ERP and MEG analysis package with a variety of source reconstruction, signal analysis and MRI processing features. ASA combines functional brain imaging with the visualization and incorporation of morphological information obtained from MRI or CT. ASA is a highly interactive and flexible software tool that can be applied to neuro-physiological and clinical brain research. ASA gives a realistic impression of your experimental configuration together with topographical mapping of EEG and MEG and the results of your analysis. ASA is developed for and by people dedicated to brain research. The concept of flexibility and openness covers even most complex analysis demands. The ASA environment is particularly attractive for those that wish to develop their own methods in third party packages like Matlab and use ASA for pre-processing and visualization purposes. | eeg, meg, electrocorticography, event related potential, fourier time-domain analysis, software, spectral analysis, temporal transformation, time domain analysis | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Commercial license | nlx_155691 | http://www.nitrc.org/projects/asa | SCR_012867 | Advanced Source Analysis | 2026-08-04 09:43:06 | 3 | ||||||
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FP-CIT SPECT brain template in MNI space Resource Report Resource Website 1+ mentions |
FP-CIT SPECT brain template in MNI space (RRID:SCR_013668) | software toolkit, software resource, software library | The FP-CIT SPECT brain template has been created using a fully automatic procedure involving posterization of the source image to three levels: background, brain and striatum. We performed a spatial affine registration of these 40 posterized source images to a posterized reference image in the MNI space. The intensity values of the transformed images is normalized linearly, assuming that the histogram of the intensity values follows an alpha-stable distribution. Lastly, we built the [123I]FP-CIT SPECT template by the mean of the transformed and normalized images. More info: 1) Salas-Gonzalez et al. Building a FP-CIT SPECT brain template using a posterization approach. Accepted in Neuroinformatics. 2) Salas-Gonzalez et al. Linear intensity normalization of FP-CIT SPECT brain images using the alpha-stable distribution. NeuroImage, Volume 65, 2013, pp. 449-455. http://dx.doi.org/10.1016/j.neuroimage.2... | SPECT, MRI, MNI |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: University of Granada; Granada; Spain |
MICINN of Spain TEC2008-02113; MICINN of Spain TEC2012-34306; Consejeria de Innovacion Ciencia y Empresa Excellence Project P07-TIC-02566; Consejeria de Innovacion Ciencia y Empresa Excellence Project P09-TIC- 4530; Consejeria de Innovacion Ciencia y Empresa Excellence Project P11-TIC-7103 |
Attribution Non-Commercial Share Alike | SciRes_000197 | SCR_013668 | 2026-08-04 09:43:15 | 1 | ||||||||
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Laplace Beltrami Filter on QuadEdge Meshes Resource Report Resource Website |
Laplace Beltrami Filter on QuadEdge Meshes (RRID:SCR_014133) | data processing software, software application, software resource, data acquisition software | A filter which allows the Laplace-Beltrami operator to determine surface harmonics in terms of PointData at each vertex. It determines the requested N most significant harmonics of a surface. | data acquisition software, filter, laplace beltrami, surface harmonic |
is used by: Insight Segmentation and Registration Toolkit is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) |
NIBIB R01-EB008171-01A1; NCRR P41-RR015241 |
Available to the research community | SCR_014133 | Laplace-Beltrami Filter on QuadEdge Meshes | 2026-08-04 09:43:20 | 0 | ||||||||
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libSBML Resource Report Resource Website 10+ mentions |
libSBML (RRID:SCR_014134) | database, catalog, data or information resource | A programming library to help users read, write, manipulate, translate, and validate SBML files and data streams. Specifically, it is a library that users may embed into their own applications. | markup language, systems biology, programming library, catalog | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Open source | http://sourceforge.net/p/sbml/code/HEAD/tree/ | SCR_014134 | Systems Biology Markup Language Library, Library for Systems Biology Markup Language | 2026-08-04 09:43:21 | 39 | ||||||||
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KWScene: MRML-based Atlas and Scene Builder/Reader/Writer Resource Report Resource Website |
KWScene: MRML-based Atlas and Scene Builder/Reader/Writer (RRID:SCR_014131) | data processing software, software application, software resource, data management software | ITK-based processing and 3D Slicer scene management in ParaView. It is meant to broaden the use of ParaView for high performance computing and visualization in the medical imaging research community. The effort is focused on developing ParaView plug-ins for managing VTK structures from 3D Slicer MRML scenes and encapsulating ITK filters for deployment in ParaView. | data management software, data processing, visualization, medical imaging, plugin | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Available to the research community | http://www.vtk.org/Wiki/KWScene, https://www.kitware.com/svn/KWPublic/trunk/KWScene/ | SCR_014131 | KWScene, KWScene: MRML-based Atlas and Scene Builder/Reader/Writer collaboration with Kitware | 2026-08-04 09:43:21 | 0 | ||||||||
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MARS (Multi-Atlas Robust Segmentation) Resource Report Resource Website 1+ mentions |
MARS (Multi-Atlas Robust Segmentation) (RRID:SCR_014137) | segmentation software, data processing software, software resource, software application, image analysis software | Software which provides the automatic solutions for efficent segmentation/labeling anatomcial structures from medical images. It has integrated several multi-atlas based segmentation methods such as majority voting, local weighted voting, and non-local patch based segmentation methods. | segmentation software, anatomical structure, label, multi atlas |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: University of North Carolina at Chapel Hill; North Carolina; USA |
PMID:24315359 | Available to the research community | SCR_014137 | 2026-08-04 09:43:21 | 5 | |||||||||
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minc-toolkit Resource Report Resource Website 1+ mentions |
minc-toolkit (RRID:SCR_014138) | data processing software, software resource, software application, image processing software, software toolkit | A set of MINC-based image processing tools packaged together. It includes MINC, N3, BICPL, EBKTS, ANIMAL, INSECT, BEaST, Register, Display, and xdisp. | image processing, software package |
uses: minc-toolkit-testsuite is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: McGill University; Montreal; Canada |
Available to the research community | http://www.bic.mni.mcgill.ca/ServicesSoftware/ServicesSoftwareMincToolKit, https://github.com/BIC-MNI/minc-toolkit | SCR_014138 | MINC Tool Kit | 2026-08-04 09:43:20 | 6 | ||||||||
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Brain Entropy in space and time (BEst) Resource Report Resource Website |
Brain Entropy in space and time (BEst) (RRID:SCR_014090) | BEst | simulation software, software application, software resource, software toolkit | A toolbox that implements several EEG/MEG source localization techniques within the Maximum Entropy on the Mean (MEM) framework. These methods are particularly dedicated to estimate accurately the source of EEG/MEG generators together with their spatial extent along the cortical surface. | software toolkit, simulation software, eem, meg, localization technique, spacial extent, cortical surface, me framework, brain entropy |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: McGill University; Montreal; Canada |
NSERC ; FRQ-NT |
http://neuroimage.usc.edu/brainstorm/Tutorials/TutBEst | SCR_014090 | Brain Entropy in space and time | 2026-08-04 09:43:19 | 0 |
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