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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
SHRINE
 
Resource Report
Resource Website
1+ mentions
SHRINE (RRID:SCR_006293) SHRINE software application, software resource, source code Software providing a scalable query and aggregation mechanism that enables federated queries across many independently operated patient databases. This platform enables clinical researchers to solve the problem of identifying sufficient numbers of patients to include in their studies by querying across distributed hospital electronic medical record systems. Through the use of a federated network protocol, SHRINE allows investigators to see limited data about patients meeting their study criteria without compromising patient privacy. This software should greatly enable population-based research, assessment of potential clinical trials cohorts, and hypothesis formation for followup study by combining the EHR assets across the hospital system. In order to obtain the maximum number of cases representing the study population, it is useful to aggregate patient facts across as many sites as possible. Cutting across institutional boundaries necessitates that each hospital IRB remain in control, and that their local authority is recognized for each and every request for patient data. The independence, ownership, and legal responsibilities of hospitals predetermines a decentralized technical approach, such as a federated query over locally controlled databases. The application comes with the SHRINE Core Ontology but it can be used with any ontology, even one that is disease specific. The Core Ontology is designed to enable the widest range of studies possible using facts gathered in the EMR during routine patient care. SHRINE allows multiple ontologies to be used for different research purposes on the same installed systems. software network, clinical database, data sharing, clinical, medical record, federated, platform, network is related to: i2b2 Cross-Institutional Clinical Translational Research project
is related to: i2b2 Research Data Warehouse
has parent organization: Harvard Medical School; Massachusetts; USA
Informatics for Integrating Biology and the Bedside ;
NLM 5 U54 LM008748;
NCRR 1 UL1 RR025758-01
PMID:19567788 Available under a BSD3 Open unspecified license Software license. nlx_151949 SCR_006293 Shared Health Research Informatics NEtwork 2026-08-04 09:41:34 8
Moss Aphasia Psycholinguistics Project Database
 
Resource Report
Resource Website
1+ mentions
Moss Aphasia Psycholinguistics Project Database (RRID:SCR_006265) MAPPD database, data or information resource A database of experimental behavioral data from > 170 aphasia patients who exhibited language impairments secondary to chronic left hemisphere stroke. The core of the database is individual-trial performance data from picture naming. Picture naming is a primary test of lexical processing. The task taps a critical juncture in the language system because naming mediates between high-level conceptual and syntactic processing and low-level phonological processing. Difficulty in this task is present to varying degrees in nearly all aphasic individuals. This site allows researchers to search through naming data from over 170 patients. Searches can narrow in on data subsets based on patient characteristics (e.g. time since aphasia onset, clinical diagnosis), stimulus characteristics (e.g. semantic category, lexical frequency) and task performance (e.g. error type). The data available on this site can be used to test hypotheses about naming impairment and aphasic impairment generally. Once the basic analysis tools of the site are exhausted, users can export the raw data for further analysis and visualization. The web database represents years of data collection. Most were recruited to the research program at Moss Rehabilitation Research Institute (MRRI). language impairment, adult human, picture naming, lexical processing, clinical, diagnosis, onset, speech, language, psycholinguistic, naming task, brain injury, left hemisphere Aphasia, Stroke Moss Rehabilitation Research Institute ;
NIDCD RO1DC000191
PMID:21714742 Account required nlx_151858 SCR_006265 2026-08-04 09:41:34 3
Integrated Clinical Trials
 
Resource Report
Resource Website
Integrated Clinical Trials (RRID:SCR_005969) database, data or information resource A virtual database currently indexing clinical trials databases including EU Clinical Trials Register and Clinicaltrials.gov. clinical trial, clinical, database uses: EU Clinical Trials Register
uses: ClinicalTrials.gov
is used by: NIF Data Federation
is used by: Aging Portal
has parent organization: Integrated
Data are licensed by their respective owners, Use and distribution is subject to the Terms of Use by the original resource nlx_151342 https://legacy.neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-5 http://neuinfo.org/nif/nifgwt.html?query=nlx_151342, https://neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nlx_151342-1, https://neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-5 SCR_005969 Integrated Clinical Trials View, NIF Clinical Trials, Integrated CT, Integrated Clinical Trial, NIF Integrated Clinical Trials 2026-08-04 09:41:29 0
GeneReviews
 
Resource Report
Resource Website
100+ mentions
GeneReviews (RRID:SCR_006560) GeneReviews database, data or information resource Provides clinically relevant and medically actionable information for inherited conditions in standardized journal-style format, covering diagnosis, management, and genetic counseling for patients and their families. Searchable book of expert-authored, peer-reviewed disease descriptions presented in standardized format and focused on clinically relevant and medically actionable information on diagnosis, management, and genetic counseling of patients and families with specific inherited conditions. genetics, disease, clinical, diagnosis, management, genetic counseling, gene, chromosomal locus, phenotype, allele, locus, mutation is used by: NIF Data Federation
is listed by: OMICtools
has parent organization: NCBI
has parent organization: University of Washington; Seattle; USA
Inherited disease PMID:20301295 Acknowledgement required, Protected by copyright OMICS_00269 SCR_006560 2026-08-04 09:41:39 115
Educational Resources in Neuroscience
 
Resource Report
Resource Website
Educational Resources in Neuroscience (RRID:SCR_000169) ERIN database, data or information resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 23,2022. A database that lists, reviews, and rates resources for teaching neuroscience at the graduate and undergraduate level. education, neuroscience, training material, clinical is used by: NIF Data Federation
lists: UCSC Genome Browser
lists: ReMoto
lists: Neurofly
lists: Free Statistical Software
is related to: ReMoto
is related to: Neurofly
is related to: Free Statistical Software
has parent organization: Society for Neuroscience
NSF DUE-1043553 PMID:26240519 THIS RESOURCE IS NO LONGER IN SERVICE nlx_143786 SCR_000169 ERIN: Educational Resources In Neuroscience, ERIN Resources 2026-08-04 09:40:04 0
University of Missouri Comparative Medicine Program
 
Resource Report
Resource Website
1+ mentions
University of Missouri Comparative Medicine Program (RRID:SCR_008298) postdoctoral program resource, training resource Program provides advanced graduate training to veterinarians who wish to pursue careers in comparative medicine. Trainees may combine one year of residency training in clinical, administrative and diagnostic laboratory animal medicine with two or more years of research training. Alternatively, trainees with experience in laboratory animal medicine, comparative pathology or related disciplines may begin research training at the time of admission. Training is designed to prepare individuals for a variety of careers including comparative medicine research, clinical and administrative laboratory animal medicine and comparative and diagnostic laboratory animal pathology. Students may either pursue an MS or PhD. Research opportunities are available in several areas including infectious disease, pathology, molecular biology, mouse biology and cardiovascular physiology. Resources available include the University of Missouri Office of Animal Resources (OAR) and Research Animal Diagnostic Laboratory (RADIL) and Mutant Mouse and Rat Resource and Research Centers. The University of Missouri Comparative Medicine Program (CMP) is post Doctor of Veterinary Medicine training that combines graduate residency training, course work and research. Trainees with relevant experience in laboratory animal medicine or comparative pathology may pursue research training without residency training. In the residency year of training, two rotations are performed: diagnostic laboratory animal pathology in the Research Animal Diagnostic Laboratory (RADIL); clinical medicine and animal resource management in the Office of Animal Resources (OAR). The remaining two to four years focus on research training under an established investigator. After three years, trainees successfully fulfilling program requirements receive a certificate of residency training. MS students complete their program while PhD students continue to pursue research training. Sponsors: CMP is supported by the University of Missouri comparative, medicine, veterinarian, residency, training, clinical, administrative, diagnostic, laboratory, animal, pathology, cardiovascular, molecular, biology, mouse, physiology administrative, animal, biology, cardiovascular, clinical, comparative, diagnostic, laboratory, medicine, molecular, mouse, pathology, physiology, residency, training, veterinarian has parent organization: University of Missouri; Missouri; USA nif-0000-24379 http://www.radil.missouri.edu/info/cmp/ SCR_008298 2026-08-04 09:42:05 4
Mitelman Database of Chromosome Aberrations in Cancer
 
Resource Report
Resource Website
100+ mentions
Mitelman Database of Chromosome Aberrations in Cancer (RRID:SCR_012877) database, data or information resource The web site includes genomic data for humans and mice, including transcript sequence, gene expression patterns, single-nucleotide polymorphisms, clone resources, and cytogenetic information. Descriptions of the methods and reagents used in deriving the CGAP datasets are also provided. An extensive suite of informatics tools facilitates queries and analysis of the CGAP data by the community. One of the newest features of the CGAP web site is an electronic version of the Mitelman Database of Chromosome Aberrations in Cancer. The data in the Mitelman Database is manually culled from the literature and subsequently organized into three distinct sub-databases, as follows: -The sub-database of cases contains the data that relates chromosomal aberrations to specific tumor characteristics in individual patient cases. It can be searched using either the Cases Quick Searcher or the Cases Full Searcher. -The sub-database of molecular biology and clinical associations contains no data from individual patient cases. Instead, the data is pulled from studies with distinct information about: -Molecular biology associations that relate chromosomal aberrations and tumor histologies to genomic sequence data, typically genes rearranged as a consequence of structural chromosome changes. -Clinical associations that relate chromosomal aberrations and/or gene rearrangements and tumor histologies to clinical variables, such as prognosis, tumor grade, and patient characteristics. It can be searched using the Molecular Biology and Clinical (MBC) Associations Searcher -The reference sub-database contains all the references culled from the literature i.e., the sum of the references from the cases and the molecular biology and clinical associations. It can be searched using the Reference Searcher. CGAP has developed six web search tools to help you analyze the information within the Mitelman Database: -The Cases Quick Searcher allows you to query the individual patient cases using the four major fields: aberration, breakpoint, morphology, and topography. -The Cases Full Searcher permits a more detailed search of the same individual patient cases as above, by including more cytogenetic field choices and adding search fields for patient characteristics and references. -The Molecular Biology Associations Searcher does not search any of the individual patient cases. It searches studies pertaining to gene rearrangements as a consequence of cytogenetic aberrations. -The Clinical Associations Searcher does not search any of the individual patient cases. It searches studies pertaining to clinical associations of cytogenetic aberrations and/or gene rearrangements. -The Recurrent Chromosome Aberrations Searcher provides a way to search for structural and numerical abnormalities that are recurrent, i.e., present in two or more cases with the same morphology and topography. -The Reference Searcher queries only the references themselves, i.e., the references from the individual cases and the molecular biology and clinical associations. Sponsors: This database is sponsored by the University of Lund, Sweden and have support from the Swedish Cancer Society and the Swedish Children''s Cancer Foundation expression, gene, aberration, abnormality, biology, breakpoint, cancer, cancer databases, characteristic, chromosomal, chromosome, clinical, clone, cytogenetic, genomic, grade, hisotology, human, mice, molecular, morphology, nucleotide, patient, pattern, polymorphism, prognosis, reagent, rearrangement, sequence, single, structural, topography, transcript, tumor, FASEB list nif-0000-21268 SCR_012877 Mitelman Database 2026-08-04 09:43:06 114
Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC)
 
Resource Report
Resource Website
100+ mentions
Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) (RRID:SCR_013142) BioLINCC database, data or information resource Repository that serves to coordinate searches across data and biospecimen collections from participants in numerous clinical trials and epidemiologic studies and to provide an electronic means for requests for additional information and the submission of requests for collections. The collections, comprising data from more than 80 trials or studies and millions of biospecimens, are available to qualified investigators under specific terms and conditions consistent with the informed consents provided by the individual study participants. Some datasets are presented with studies and supporting materials to facilitate their use in reuse and teaching. Datasets support basic research, clinical studies, observational studies, and demonstrations. Researchers wishing to apply to submit biospecimen collections to the NHLBI Biorepository for sharing with qualified investigators may also use this website to initiate that process. cardiovascular, pulmonary, hematology, clinical, clinical trial, blood, lung, heart, biological specimen, health, disease, medicine, epidemiology, epidemiologic study, FASEB list is listed by: One Mind Biospecimen Bank Listing
is listed by: DataCite
is listed by: NIH Data Sharing Repositories
is listed by: Connected Researchers
is listed by: NIDDK Information Network (dkNET)
is related to: NIH Data Sharing Repositories
is related to: Framingham Heart Study
has parent organization: National Heart Lung and Blood Institute
NHLBI Public, The community can contribute to this resource r3d100010834, nlx_151758 https://biolincc.nhlbi.nih.gov/, https://biolincc.nhlbi.nih.gov/ SCR_013142 NHLBI Biorepository 2026-08-04 09:43:09 250
Jackson Laboratory Clinical Knowledgebase
 
Resource Report
Resource Website
10+ mentions
Jackson Laboratory Clinical Knowledgebase (RRID:SCR_014965) CKB database, data or information resource Semi-automated and manually curated database of gene/variant annotations, therapy knowledge, diagnostic/prognostic information, and oncology clinical trials. Users can search CKB via gene, gene variants, drug, drug class, indication, and clinical trials. cancer, database, knowledgebase, clinical trial, clinical, gene, gene annotation, variant annotation, therapy, diagnosis Cancer PMID:26772741 Available to the research community, For educational and research purposes only, Not intended to be used for medical advice/diagnosis or treatment SCR_014965 Jackson CKB 2026-08-04 09:43:32 27
Attie Lab Diabetes Database
 
Resource Report
Resource Website
1+ mentions
Attie Lab Diabetes Database (RRID:SCR_016639) database, data or information resource Interactive database of gene expression and diabetes related clinical phenotypes. Allows to search gene expression in tissues as a function of obesity, strain, and age, in a mouse. interactive, database, gene, expression, diabetes, related, clinical, phenotype, mouse is listed by: OMICtools
has parent organization: University of Wisconsin-Madison; Wisconsin; USA
diabetes Free, Freely available SCR_016639 2026-08-04 09:43:57 3
National Death Index
 
Resource Report
Resource Website
10+ mentions
National Death Index (RRID:SCR_016369) NDI database, data or information resource Database of death record information on file in state vital statistics offices. Working with these state offices, the National Center for Health Statistics (NCHS) established the NDI as a resource to aid epidemiologists and other health and medical investigators with their mortality ascertainment activities. death, mortality, epidemic, statistic, epidemiology, clinical, terminal illness, dead, deceased has parent organization: Centers for Disease Control and Prevention CDC Application required SCR_016369 National Mortality Index, Death Index 2026-08-04 09:43:53 17
Integrated Tumor Transcriptome Array and Clinical data Analysis
 
Resource Report
Resource Website
1+ mentions
Integrated Tumor Transcriptome Array and Clinical data Analysis (RRID:SCR_008182) ITTACA database, data or information resource THIS RESOURCE IS NO LONGER IN SERVICE, documented on 6/12/25. ITTACA is a database created for Integrated Tumor Transcriptome Array and Clinical data Analysis. ITTACA centralizes public datasets containing both gene expression and clinical data and currently focuses on the types of cancer that are of particular interest to the Institut Curie: breast carcinoma, bladder carcinoma, and uveal melanoma. ITTACA is developed by the Institut Curie Bioinformatics group and the Molecular Oncology group of UMR144 CNRS/Institut Curie. A web interface allows users to carry out different class comparison analyses, including comparison of expression distribution profiles, tests for differential expression, patient survival analyses, and users can define their own patient groups according to clinical data or gene expression levels. The different functionalities implemented in ITTACA are: - To test if one or more gene, of your choice, is differentially expressed between two groups of samples exhibiting distinct phenotypes (Student and Wilcoxon tests). - The detection of genes differentially expressed (Significance Analysis of Microarrays) between two groups of samples. - The creation of histograms which represent the expression level according to a clinical parameter for each sample. - The computation of Kaplan Meier survival curves for each group. ITTACA has been developed to be a useful tool for comparing personal results to the existing results in the field of transcriptome studies with microarrays. expression, gene, analysis, array, bioinformatics, bladder, breast, cancer, carcinoma, clinical, integrated, melanoma, microarray, molecular, oncology, patient, phenotype, survival, transcriptome, tumor, uveal has parent organization: Curie Institute; Paris; France PMID:16381943 THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-21227 SCR_008182 ITTACA 2026-08-04 09:42:04 4
International Database of Tetrahydrobiopterin Deficiencies
 
Resource Report
Resource Website
International Database of Tetrahydrobiopterin Deficiencies (RRID:SCR_008171) database, data or information resource THIS RESOURCE IS NO LONGER IN SERVICE, documented on August 26, 2016. The BIODEF database have tabulated the most common clinical and laboratory data related to hyperphenylalaninaemia and tetrahydrobiopterin deficiencies. Additionally, there are data regarding treatment, outcome, and DNA analysis. Approximately 2% of newborns with hyperphenylalaninaemia are deficient in tetrahydrobiopterin. Selective screening must be performed in all instances where hyperphenylalaninaemia is detected by neonatal screening. In the last 20 years, 308 patients with tetrahydrobiopterin deficiencies have been recognized as a result of screening carried out, worldwide, in Departments of Paediatrics. Of these 308 patients, 181 suffered from 6-pyruvoyltetrahydropterin synthase deficiency, 92 from dihydropteridine reductase deficiency, 13 from pterin-4a-carbinolamine dehydratase deficiency, 12 from GTP cyclohydrolase I deficiency, and 10 are still unclassified. The BIODEF database have tabulated the most common clinical and laboratory data related to hyperphenylalaninaemia and tetrahydrobiopterin deficiencies. Additionally, there are data regarding treatment, outcome, and DNA analysis. Preliminary evaluation reveals that the degree of hyperphenylalaninaemia can vary from normal to 2500 mumol/L. Analyses of pterins in urine and measurement of dihydropteridine reductase activity from Guthrie cards are absolutely essential tests for accurate diagnosis. There is a regional (demographic) variation in the frequency of tetrahydrobiopterin deficiencies indicating the highest incidence in Saudi Arabia, probably a consequence of the high consanguinity rate. ethnic, frequency, 6-pyruvoyltetrahydropterin synthase deficiency, analysis, bh4, clinical, deficiency, demographic, diagnosis, dihydropteridine reductase deficiency, dna, gtp cyclohydrolase i deficiency, hyperphenylalaninaemia, measurement, neonatal, origin, outcome, pterin, pterin-4a-carbinolamine dehydratase deficiency, sex, tetrahydrobiopterin, treatment, urine THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-21052 SCR_008171 BIODEF 2026-08-04 09:42:03 0
Turkish Human Mutation Database
 
Resource Report
Resource Website
Turkish Human Mutation Database (RRID:SCR_008246) database, data or information resource The Molecular Biology and Genetics Department at Bogazii University is one of the major reference laboratories in Turkey, specialized in molecular analysis of common genetic disorders. Over the years, the rapid accumulation of mutation data in connection with detailed clinical and laboratory information, has led to the idea of establishing a national database for storing, analysing and presenting it in a more efficient and systematic way. For this purpose, an interdisciplinary project was initiated in 1995. b-Thalassemia and Hemophilia-B Databases were selected as preliminary models, for they offer alternative design and implementation strategies due to different clinical and genetic characteristics. b-Thalassemia is an autosomal recessive disorder, characterized by microcytosis and hemolytic anemia, which is the result of reduced b-Globin chain synthesis. In Turkey, the disease is represented with a gene frequency of 2 and reflected by a wide spectrum of clinical manifestations with the presence of more than 40 different mutation. Currently, there is no database available for thalassemia mutations. Hemophilia B is an X-linked recessive disorder caused by heterogenous mutations, resulting in a marked deficit of coagulation factor IX (FIX); an essential component of the clotting mechanism. A hemophilia B database was first published in 1990 as a list of point mutations and short additions and deletions with 115 mutations comprising 216 entries Gene-, System-, or Disease- Specific Databases gene-, genetic, anemia, autosomal, b-globin, biology, b-thalassemia, clinical, clotting, coagulation, disorder, hemolytic, hemophilia-b, heterogenous, laboratory, mechanism, microcytosis, model, molecular, mutation, or disease- specific databases, synthesis, system- nif-0000-21404 http://www.medinfo.hacettepe.edu.tr/hmuttr/ SCR_008246 Human Mutation Database 2026-08-04 09:42:04 0
University of Kentucky's Alzheimer's Disease Center
 
Resource Report
Resource Website
1+ mentions
University of Kentucky's Alzheimer's Disease Center (RRID:SCR_008766) UK-ADC, UK ADC biomaterial supply resource, material resource, tissue bank An organization which includes a tissue bank, a database, study design consultation, clinical resources, and a community registry database. The UK-ADC shares data with the NIA national database (NACC), as well as with independent, qualified investigators both within and outside the UK-ADC. This resource's associated tissue bank is comprised of anonymized brain tissue, blood, and cerebrospinal fluid samples from patients in the clinic, as well as frozen post-mortem brain tissue samples. This organization also shares research resources with the National Alzheimer's Coordinating Center (NACC), NACC collaborative initiatives, the Alzheimer's Disease Neuroimaging Initiative (ADNI), other Alzheimer Disease Centers (ADCs), and any qualified investigators from either the University of Kentucky or the general scientific community. post-mortem, brain, brain tissue, cerebral spinal fluid, serum, plasma, buffy coat, blood, alzheimer's disease, dementing disorder, mild cognitive impairment, dementia, frozen, formalin fixed, paraffin embedded slide, clinical, neuropathology, neuropathologic disease, neuropathologic diagnosis, clinical, registry is listed by: One Mind Biospecimen Bank Listing
has parent organization: University of Kentucky Alzheimer's Disease Center
Alzheimer's disease, Dementing disorder, Dementia, Neuropathologic diagnosis NIA P30 AG028383 Public nlx_144056 http://www.mc.uky.edu/coa/clinicalcore/alzheimercenter.html#neuropathology, http://www.mc.uky.edu/coa/clinicalcore/Neuropathology%20Core.html SCR_008766 University of Kentucky Alzheimer's Disease Center Biospecimen Data or Clinical Request, UK-Alzheimer's Disease Center Biospecimen Data or Clinical Request 2026-08-04 09:42:12 1
Task Independent Fluctuations Discussion
 
Resource Report
Resource Website
Task Independent Fluctuations Discussion (RRID:SCR_009515) Task Independent Fluctuations Discussion software resource, narrative resource, discussion, data or information resource The methodology and applications of task independent fluctuation measures including: connectivity maps of fMRI resting state scans, research using EEG/MEG/PET etc, methods to remove non-neural fluctuations, and applications to clinical populations. community, information resource, knowledge environment, model, magnetic resonance, other software resource, web environment, fmri, fmri resting state, eeg, meg, pet, non-neural fluctuation, clinical is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) nlx_155677 SCR_009515 2026-08-04 09:42:23 0
Gazel Database
 
Resource Report
Resource Website
1+ mentions
Gazel Database (RRID:SCR_008962) Gazel database, data or information resource A 20 year, 20,000 person, open longitudinal epidemiological study of a cohort town. GAZEL was not constructed to answer a specific question rather it was designed to help analyze a wide range of scientific problems and is accessible to the community of researchers specializing in epidemiology. Translation is not available for all pages. The GAZEL cohort, set up in 1989 by Inserm Unit 88 (subsequently Unit 687), in cooperation with several departments of ��lectricit�� de France-Gaz de France (EDF-GDF), was a public utility firm in France involved in production, transmission and distribution of energy. GAZEL initially included 20 624 volunteers working at EDF-GDF (15 010 men and 5614 women), aged from 35 to 50 years. In accordance with its purpose as a scientific research platform, the GAZEL cohort is permanently open to epidemiologic research teams. Today, more than 50 projects on very diversified themes have been set up in GAZEL by some 20 teams, French, belonging to different bodies, and foreign (Germany, Belgium, Canada, Great Britain, Sweden, Finland, and USA). clinical, epidemiology, longitudinal, adult human, middle adult human, early adult human has parent organization: National Institute of Health and Medical Research; Rennes; France Aging Restricted r3d100011829, nlx_151989 https://doi.org/10.17616/R3DH0P SCR_008962 2026-08-04 09:42:16 2
Brain and Body Genetic Resource Exchange
 
Resource Report
Resource Website
1+ mentions
Brain and Body Genetic Resource Exchange (RRID:SCR_008959) BB-GRE database, data or information resource A database and associated tools for investigating the genetic basis of neurodisability. It combines phenotype information from patients with neurodevelopmental and behavioral problems with clinical genetic data, and displays this information on the human genome map. Basic access to genetic information (deletions, duplications) relating to participants with neurodevelopmental disorders is provided without an account; access to the full dataset requires an account. The genetic information that is available to view comprises potentially pathogenic copy number variation across the genome, detected by array comparative genome hybridization (aCGH) using a customized 44K oligonucleotide array. developmental disorder, copy number, neurodevelopmental disorder, child, phenotype, genotype-phenotype, brain, genetic, gene, genotype, behavior, clinical, genome, neurodevelopment, behavioral disorder, genetic variant, development has parent organization: King's College London; London; United Kingdom Schizophrenia, Mental retardation, Attention deficit hyperactivity disorder, Developmental language delay, Dyslexia, Sleep disorder, Epilepsy, Dysmorphism, Neurodisability, Autism Acknowledgement required nlx_151987 http://bbgre-dev.iop.kcl.ac.uk/info/about-us SCR_008959 BBGRE.org, Brain & Body Genetic Resource Exchange, BB-GRE database 2026-08-04 09:42:16 1
Syapse
 
Resource Report
Resource Website
Syapse (RRID:SCR_012023) Syapse commercial organization, software resource, service resource A platform and application suite for bringing together omics and clinical data. medicine, molecular profiling, omics, clinical is listed by: OMICtools Commercial license OMICS_02092 SCR_012023 2026-08-04 09:42:53 0
Cell Model Passports
 
Resource Report
Resource Website
1+ mentions
Cell Model Passports (RRID:SCR_027682) database, data or information resource, catalog Hub for clinical, genetic and functional datasets of preclinical cancer models.Provides details of cell model relationships, patient and clinical information, as well as access to associated genetic and functional datasets. Passports database contains curated details and standardized annotation for cell models, including cancer organoid cultures. Users can navigate database via tissue, cancer-type, genetic feature and data availability to select model. REST-API provides programmatic data access and exploration. clinical, genetic, functional, datasets, preclinical cancer models, has parent organization: Wellcome Trust Sanger Institute; Hinxton; United Kingdom Wellcome Trust ;
Wellcome Sanger Institute
PMID:30260411 Free, Freely available SCR_027682 2026-08-04 09:46:16 2

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