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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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International Institute of Molecular and Cell Biology; Warsaw; Poland Resource Report Resource Website 1+ mentions |
International Institute of Molecular and Cell Biology; Warsaw; Poland (RRID:SCR_000971) | IIMCB | institution | International Institute of Molecular and Cell Biology creates partnerships with research centers within and outside Poland. This organization provides a base of administration, management of finances and resources, sharing space and equipment, grant writing and grant management procedures, etc. They organize workshops, training courses, conferences and other scientific events for researchers of various specialties and nationalities. Additionally, this organization commercializes results to provide biotechnological solutions with regards to the global economy and global research services deals. | poland, warsaw, institution, administration, management, equipment, grant writing, grant management, commercial, biotechnology, global economy, global research, research center, partnership |
is parent organization of: MetaLocGramN is parent organization of: Modomics |
nlx_156957, grid.419362.b | https://ror.org/01y3dkx74 | SCR_000971 | International Institute of Molecular and Cell Biology, International Institute of Molecular and Cell Biology (IIMCB) | 2026-09-19 12:49:32 | 1 | |||||||
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Mount Sinai School of Medicine: In-Vivo Molecular Imaging Laboratory Resource Report Resource Website |
Mount Sinai School of Medicine: In-Vivo Molecular Imaging Laboratory (RRID:SCR_001785) | analysis service resource, biomaterial analysis service, data computation service, material analysis service, production service resource, service resource | The In-Vivo Molecular Imaging Laboratory (IMIL) is a MSSM shared resource facility serving the research community of Mount Sinai with equipment and imaging expertise. State-of-the-art bioluminescent as well as fluorescent imaging modalities are supported for in-vivo monitoring of cellular and genetic activity. Investigators are provided with cutting edge imaging technologies as well as analysis techniques. The long-term goal is to establish a comprehensive SRF for in-vivo molecular imaging using micro-MRI, micro-PET and other modalities. IMIL houses a Xenogen IVIS-200 Series imaging system with the integrated fluorescent imaging options. Simultaneous dual reporter in-vivo imaging is possible with bioluminescence and fluorescence probes. The imaging chamber has a gas anesthesia manifold that can accommodate up to 5 mice for simultaneously image acquisition. Selectable field of views allow in-plane (X,Y) imaging resolutions of up to 60-microm. Integrated spectra filters allow for the determination of signal source depth (Z). IMIL will provide data acquisition services as well as analysis. IMIL has a dedicated imaging technologist for data acquisition. Investigators will bring their prepared animal to the lab and an IMIL imaging technologist will assist in sedating the animals and acquire imaging data. Typical imaging sessions last about an hour. Certified users who are trained in the use of the software will be able to perform their own analysis at the console. Usage of the imaging device is charged by the hour ($100/hour). Structural Imaging The IVIS-200 has the built-in capability of obtaining an image of the surface topography of the animal for 2D and 3D localization. If additional true 3D imaging data is required, micro MRI is available through the Imaging Science Laboratories (ISL). Image Analysis The IVIS-200 has an integrated image acquisition and analysis software (Living Image Software 2.50). Comprehensive data quantification is possible with this software. Raw data as well as analyzed results can be electronically transferred to the investigators. Support is also available for additional image analysis such as intermodality coregistration, 3D rendering, and group statistics. Additional software packages include MedX, SPM, Brainvoyager, Analyze, and in-house developed software. | equipment, fluorescence, fluorescent, genetic, 2d, 3d, analysis, bioluminescence, bioluminescent, cellular, imaging, intermodality coregistration, in-vivo, localization, mice, micro-mri, micro-pet, molecular, probe, software, spectra, technology, xenogen ivis-200 series | has parent organization: Icahn School of Medicine at Mount Sinai; New York; USA | Free, Freely available | nif-0000-10299 | http://www.mssm.edu/research/resources/molecular_imaging/ | SCR_001785 | MSSM IMIL | 2026-09-19 12:49:47 | 0 | |||||||
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SA Instruments: Model 1025 MR-compatible Small Animal Monitoring and Gating System Resource Report Resource Website 1+ mentions |
SA Instruments: Model 1025 MR-compatible Small Animal Monitoring and Gating System (RRID:SCR_002090) | Model 1025 Monitoring & Gating System | instrument resource | Magnetic resonance compatible monitoring and gating system, including software, that enables monitoring rectal temperature, electrocardiogram and respiration rate during magnetic resonance imaging scan time. The PC displays multiple waveforms, measured values, trends and gating pulses. The data Acquisition modules are controlled by menu driven software from the PC. Data acquisition modules are available to measure the following parameters: ECG, respiration (three ways), temperature (two ways), pressure including invasive blood pressure (two ways), oxygen saturation and end-tidal CO2. | hardware, instrument, equipment, physiology, monitoring, gating, mr environment, respiration, temperature, blood pressure, oxygen saturation, end-tidal co2, magnetic resonance, electrocardiogram, magnetic resonance imaging, software resource | Free, Freely available | SciRes_000157 | https://wikihost.uib.no/mriwiki/images/4/4c/SAInstruments_1025.pdf | http://www.i4sa.com/web_app/main/defaultProduct.aspx?ID=82&PT=3 | SCR_002090 | Model 1025 Monitoring and Gating System, MR-Compatible Model 1025 Monitoring and Gating System, Small Animal Monitoring and Gating System | 2026-09-19 12:49:53 | 3 | ||||||
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Leica: TCS SPE Resource Report Resource Website 10+ mentions |
Leica: TCS SPE (RRID:SCR_002140) | TCS SPE | instrument resource | High resolution, compact and robust confocal that enables immunohistochemical colocalization analysis of florescent markers. Leica TCS SPE confocal point-scanning, spectral system for fluorescence imaging of live or fixed cells. | confocal microscope, imaging, instrument, equipment, hardware | has parent organization: Leica Microsystems | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_002140.pdf | SciRes_000154 | http://www.leica-microsystems.com/fileadmin/downloads/Leica%20TCS%20SPE/Brochures/Leica%20TCS%20SPE-Brochure_EN.pdf | SCR_002140 | Leica TCS SPE confocal microscope | 2026-09-19 12:49:53 | 33 | |||||
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BD Biosciences: LSR II Flow Cytometer Resource Report Resource Website 10+ mentions |
BD Biosciences: LSR II Flow Cytometer (RRID:SCR_002159) | LSR II Flow Cytometer | instrument resource | Benchtop high-performance cell sorter with multiple lazer, detector and fluoroscrome options. Allows detection of 12 parameters (10 color conjugates, forward and sideward scatter). | flow cytometer, instrument, equipment, hardware | has parent organization: BD Biosciences | THIS RESOURCE IS NO LONGER IN SERVICE | https://drive.google.com/file/d/1iqsXa8XNCYWutCswBRYBWluHGag0lOSx/view?usp=drivesdk | Model_Number_BD LSR II, SciRes_000152 | https://fccf.sitehost.iu.edu/pdf/BDLSRIIUserGuide.pdf | http://www.rockefeller.edu/fcrc/pdf/BD_LSRII_Brochure_SJ-0142-00.pdf | SCR_002159 | 2026-09-19 12:49:53 | 43 | |||||
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COGNISION Resource Report Resource Website 1+ mentions |
COGNISION (RRID:SCR_002362) | COGNISION | software resource | A portable, highly integrated, internet-enabled, hardware / software platform and patient management system, which includes an online Patient Manager module which complies with the HIPAA Final Security Rule, an event-related potential (ERP) Viewer module to view and analyze raw and average ERP waves, and a Protocol Editor module to simplify the choice and administration of selected ERP protocols. It is also easy to train and administer with non-specialized personnel, and is designed to be used in an out-patient setting. COGNISION TM with auditory or visual event-related potential (ERP) technology, provides a direct physiologic measure of patients' cognitive processing (i.e., a cognitive biomarker). | eeg, eeg, meg, electrocorticography, event-related potentials, hardware, physiological recording, instrument, equipment | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Commercial License | nlx_155724 | http://www.nitrc.org/projects/neuronetrix | SCR_002362 | COGNISION (TM) System | 2026-09-19 12:49:57 | 2 | ||||||
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OEI: fMRI compatible olfactometer Resource Report Resource Website 1+ mentions |
OEI: fMRI compatible olfactometer (RRID:SCR_002507) | OEI fMRI compatible olfactometer | instrument resource | A computerized, odor delivery device that can be used for basic research applications including mapping olfactory centers, cognitive / learning research, neuro-marketing among other uses. Additional products including tests for odor threshold, odor identification, odor discrimination and odor memory. | experiment control, hardware, magnetic resonance, stimulus presentation, odor, olfactory, instrument, equipment | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Commercial License | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_002507.pdf | nlx_155907 | http://www.nitrc.org/projects/oei, http://www.osmicenterprises.com/docs/OsmicFMRIOlfactomterManual%207-1-13.pdf | SCR_002507 | 2026-09-19 12:49:59 | 4 | ||||||
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Leica: DMRE Fluorescence Microscope Resource Report Resource Website 1+ mentions |
Leica: DMRE Fluorescence Microscope (RRID:SCR_000011) | Leica DMRE microscope | instrument resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 31,2025. Microscope that enables bright field and fluorescence imaging options. | microscope, fluorescence, imaging, hardware, instrument, equipment, USEDit | has parent organization: Leica Microsystems | THIS RESOURCE IS NO LONGER IN SERVICE | https://drive.google.com/file/d/1wdHpvLSM220N2HdsOjW8rK2mWlPoJEcP/view?usp=drivesdk | SciRes_000155 | SCR_000011 | Fluorescence Leica DMRE microscope | 2026-09-19 12:49:13 | 9 | ||||||
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Waters: SQD2 LC/MS system Resource Report Resource Website 10+ mentions |
Waters: SQD2 LC/MS system (RRID:SCR_022217) | instrument resource | System includes SQD2 as single quadrupole MS with Waters H-Class Acquity UPLC, operated as open access platform for trained users. SQ Detector2 is single quadrupole mass detector for chromatography compatible with range of chromatography platforms and ionization sources. | SQ Detector2, instrument, equipment, USEDit, single quadrupole MS, mass spectrometer, liquid chromatography, Waters H-Class Acquity UPLC, chromatography platform, chromatography quadrupole mass detector |
uses: Waters SQ Detector 2 Mass Spectrometer is used by: Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility |
SCR_022217 | Stanford Waters SQD2 LC/MS system | 2026-09-19 12:55:19 | 12 | ||||||||||
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Zeiss: LSM 900 with Airyscan 2 Resource Report Resource Website 10+ mentions |
Zeiss: LSM 900 with Airyscan 2 (RRID:SCR_022263) | instrument resource | Laser scanning confocal microscope for multiplex imaging and analysis., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | Laser scanning, confocal microscope, imaging and analysis, microscope, instrument, equipment, USEDit | is listed by: USEDit | THIS RESOURCE IS NO LONGER IN SERVICE | Model_Number_LSM _900 | SCR_022263 | 2026-09-19 12:55:20 | 15 | |||||||||
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LI-COR: Odyssey XF Imaging System Resource Report Resource Website 1+ mentions |
LI-COR: Odyssey XF Imaging System (RRID:SCR_022510) | instrument resource | System includes Odyssey XF Imager and Empiria Studio Software for streamlined image acquisition, organization, and analysis of Western blots. Used for imaging near infrared and enhanced chemiluminescent Western blots, to detect multiple targets on same blot with two channel multiplex fluorescence, and document DNA gels. | Li-Cor Inc., image acquisition, organization, analysis of Western blots, Western blots, DNA gels, imager, instrument, equipment, USEDit | Restricted | SCR_022510 | Odyssey XF, Odyssey XF Imaging System, Li-Cor Odyssey XF Imaging System | 2026-09-19 12:55:22 | 7 | ||||||||||
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BD Biosciences: FACSymphony A5 SE Cell Analyzer Resource Report Resource Website 1+ mentions |
BD Biosciences: FACSymphony A5 SE Cell Analyzer (RRID:SCR_022674) | instrument resource | Flow cytometer gains full visible spectrum coverage to collect all light emitted without need for filter changes, increasing dye flexibility and number of simultaneous colors. Uses unmix spectral data live in BD FACSDiva Software while retaining familiar compensation workflow. May improve resolution of difficult cells and populations using autofluorescence unmixing. | Flow cytometer, cell analyzer, unmix spectral data live, difficult cells resolution, autofluorescence unmixing, instrument, equipment, USEDit | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022674.pdf | Model_Number_FACSymphony_A5_SE | https://www.bdbiosciences.com/content/dam/bdb/marketing-documents/BD-FACSymphony-A5-SE-Brochure1.pdf | SCR_022674 | BD FACSymphony™ A5 SE Cell Analyzer, BD FACSymphony A5 SE | 2026-09-19 12:55:24 | 5 | |||||||
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SciReq: flexiVent system Resource Report Resource Website 1+ mentions |
SciReq: flexiVent system (RRID:SCR_022673) | instrument resource | System for small animal pulmonary function. Used for in vivo respiratory mechanics measurements. Goes beyond traditional resistance and compliance mechanics of pulmonary ventilation, and captures details about mechanical properties of conducting airways, terminal airways and parenchyma. Achieves sensitivity and reproducibility by precisely controlling experimental conditions. | USEDit, instrument, equipment, SCIREQ, animal pulmonary function, in vivo respiratory mechanics measurements, pulmonary ventilation | is listed by: USEDit | Restricted | SCR_022673 | SCIREQ flexiVent system | 2026-09-19 12:55:24 | 4 | |||||||||
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BioMerieux: NucliSens easyMAG system Resource Report Resource Website 1+ mentions |
BioMerieux: NucliSens easyMAG system (RRID:SCR_022666) | instrument resource | System for total nucleic acid extraction from variety of sample types and volumes. System automates enhanced magnetic silica version of bioMérieux’s proprietary BOOM technology gold standard for universal extraction of RNA and DNA.Clinical use includes nucleic acid extraction in front of molecular infectious disease assays, molecular oncology assays, molecular genetics assays. | BioMérieux, total nucleic acid extraction, extraction of RNA and DNA, USEDit, instrument, equipment | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022666.pdf | SCR_022666 | BioMérieux NucliSens easyMAG, BioMérieux NucliSens R easyMAG | 2026-09-19 12:55:24 | 5 | |||||||||
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WPI: Constant Current Stimulus Isolator Resource Report Resource Website 1+ mentions |
WPI: Constant Current Stimulus Isolator (RRID:SCR_022660) | instrument resource | Automated bipolar pulsing for zero net charge on biological preparations. Includes Constant current, Unipolar and bipolar stimulation modes, Built-in non-compliance alarm, Optically isolated input Standard TTL triggering, DC test mode. Powered by 9 V alkaline or rechargeable batteries. | Isolator, stimulus isolator, constant current isolator, constant current, World Precision Instruments, USEDit, instrument, equipment | is listed by: USEDit | Restricted | Model_Number_A365 | SCR_022660 | Stimulus Isolator, WPI Constant Current Stimulus Isolator, Constant Current Stimulus Isolator | 2026-09-19 12:55:24 | 1 | ||||||||
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Standard BioTools: Biomark HD system Resource Report Resource Website 10+ mentions |
Standard BioTools: Biomark HD system (RRID:SCR_022658) | instrument resource | Automated, high performance PCR/qPCR system that uses microfluidics technology to process samples at nanoliter scale volumes for gene expression, genotyping, sample identification, copy number variation analysis and digital PCR. With wide range of integrated fluidic circuit (IFC) formats available, scaling from mid to high throughput on single system. | PCR, qPCR, microfluidics technology, nanoliter scale volumes, integrated fluidic circuit formats, USEDit, instrument, equipment | is listed by: USEDit | Restricted | SCR_022658 | Biomark™ HD system, BioMark HD, Fluidigm Biomark HD system, Biomark HD system (Fluidigm) | 2026-09-19 12:55:24 | 18 | |||||||||
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OHAUS: CS200P Portable Balance Resource Report Resource Website |
OHAUS: CS200P Portable Balance (RRID:SCR_022536) | instrument resource | OHAUS CS lightweight, portable, compact balance for use in laboratory, industrial, education and home use applications. CS offers great value without sacrificing accuracy for weighing jobs of 200g to 5000g. | USEDit, instrument, equipment, portable balance, compact balance, | is listed by: USEDit | Restricted | SCR_022536 | 2026-09-19 12:55:22 | 0 | ||||||||||
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NPI: Pressure Application Module Resource Report Resource Website 1+ mentions |
NPI: Pressure Application Module (RRID:SCR_022657) | PDES | instrument resource | Pneumatic drug ejection. Used to apply ionic and non-ionic substances in small amounts. Locally precise application with microJECT pipette holder with built-in valve. Also available as 19″ stand alone device. | Pneumatic drug ejection, USEDit, instrument, equipment | is listed by: USEDit | SCR_022657 | Pressure Application Module (NPI Electronic), PDES Pressure Application Module, PDES, NPI Electronics PDES | 2026-09-19 12:55:24 | 1 | |||||||||
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Artec 3D: Eva Fast 3D scanner Resource Report Resource Website |
Artec 3D: Eva Fast 3D scanner (RRID:SCR_022589) | instrument resource | 3D scanner for making quick, textured, and accurate 3D models of medium sized objects such as human bust, alloy wheel, or motorcycle exhaust system. Used for capturing objects of almost any kind, including objects with black and shiny surfaces. | Artec3D, 3D scanner, 3D models, medium sized objects, capturing objects, instrument, equipment, USEDit |
is listed by: USEDit is listed by: MfN Berlin Micro-CT Laboratory Core Facility |
Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022589.pdf | SCR_022589 | 2026-09-19 12:55:23 | 0 | |||||||||
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Artec 3D: Space Spider Resource Report Resource Website 1+ mentions |
Artec 3D: Space Spider (RRID:SCR_022588) | instrument resource | 3D scanner based on blue light technology. Precision instrument for CAD users and engineers. Used for capturing small objects or intricate details of large industrial objects in high resolution, with accuracy and brilliant color. | Artec3D, 3D scanner, blue light technology, capturing small objects, intricate details of large industrial objects, instrument, equipment, USEDit |
is listed by: USEDit is listed by: MfN Berlin Micro-CT Laboratory Core Facility |
Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022588.pdf | SCR_022588 | 2026-09-19 12:55:23 | 2 |
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