Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
TrackVis Resource Report Resource Website 100+ mentions |
TrackVis (RRID:SCR_004817) | TrackVis | data processing software, image reconstruction software, software resource, software application, image processing software, image analysis software, data visualization software, software toolkit | TrackVis is software tool that can visualize and analyze fiber track data from diffusion MR imaging (DTI/DSI/HARDI/Q-Ball) tractography. It does NOT perform actual fiber tracking. Diffusion Toolkit is a set of tools that reconstruct diffusion imaging data and generate fiber track data for TrackVis to visualize. Because these two sets of tools were developed and maintained separately and each has distinguished funtionalities, they decided to distribute them as two separate programs for the ease of maintenance and upgrade. You do need both of them to perform complete diffusion data processing and analysis. Features of TrackVis include: * Cross-platform. Works on Windows, Mac OS X and Linux with native look and feel. * A variety of track filters (track selecting methods) allowing users to explore and locate specific bundles with ease. * Multiple rendering modes with customizable scalar-driven color codes. * Real-time parameter adjustment and 3D render. * Open format of the track data file allowing users to integrate customized scalar data into the track file and visualize and analyze it. Save and restore scenes in XML style scene file. * Statistical scalar analysis of tracks and ROIs. * Synchronized real-time multiple dataset analysis and display allowing time-point and/or subject comparison. Synchronized analysis and display on same dataset can also be performed in real-time remotely over the network. * Upfront in-line parameter adjustment in real-time. No tedious pop-up dialogs. TrackVis works with Track File created by Diffusion Toolkit. Diffusion Toolkit processes raw DICOM, Nifti format and ANALYZE images. TrackVis and Diffusion Toolkit are cross-platform software. They can run on Windows XP, Mac OS X as well as Linux. | mri, dti, diffusion spectrum image, diffusion imaging, image reconstruction, diffusion mr fiber tracking, visualization, analyze, c++, console (text based), dicom, fiber tracking, image reconstruction, linux, macos, microsoft, magnetic resonance, nifti, posix/unix-like, tractography, visualization, win32 (ms windows), windows |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: CAMINO-TRACKVIS |
MGH GCRC ; NIMH 5R01MH064044 |
Free for academic and non-profit research use, Non-commercial, For other purposes, Please contact them | nlx_143916 | SCR_004817 | TrackVis and Diffusion Toolkit | 2026-08-04 09:41:13 | 491 | ||||||
|
ENIGMA: Enhancing Neuro Imaging Genetics Through Meta-Analysis Resource Report Resource Website 100+ mentions |
ENIGMA: Enhancing Neuro Imaging Genetics Through Meta-Analysis (RRID:SCR_005515) | ENIGMA | knowledge environment, narrative resource, data or information resource, experimental protocol | Network that brings together researchers in imaging genomics, to understand brain structure and function, based on MRI, DTI, fMRI and genomewide association scan (GWAS) data. The ENIGMA Network has several goals: * to create a network of like-minded individuals, interested in pushing forward the field of imaging genetics * to ensure promising findings are replicated via member collaborations, in order to satisfy the mandates of most journals * to share ideas, algorithms, data, and information on promising findings or methods * to facilitate training, including workshops and conferences on key methods and emerging directions in imaging genetics. Data sharing with other members of the ENIGMA Network is optional and by no means a requirement of joining the network. Genetics and Imaging Protocols are available. | mri, dti, fmri, genomewide association scan, imaging, genetics, genomics, brain, brain structure, brain function, application, clinical neuroinformatics, genetic association, genomic analysis, imaging genomics, imputation, loni pipeline, magnetic resonance, nifti, snp, gene |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: University of Southern California; Los Angeles; USA |
Creative Commons License | nlx_144613 | http://www.nitrc.org/projects/enigma | http://enigma.loni.ucla.edu/ | SCR_005515 | Enhancing Neuro Imaging Genetics Through Meta-Analysis, ENIGMA Network | 2026-08-04 09:41:22 | 215 | |||||
|
NEURON Resource Report Resource Website 5000+ mentions |
NEURON (RRID:SCR_005393) | NEURON | simulation software, software application, software resource | NEURON is a simulation environment for modeling individual neurons and networks of neurons. It provides tools for conveniently building, managing, and using models in a way that is numerically sound and computationally efficient. It is particularly well-suited to problems that are closely linked to experimental data, especially those that involve cells with complex anatomical and biophysical properties. NEURON has benefited from judicious revision and selective enhancement, guided by feedback from the growing number of neuroscientists who have used it to incorporate empirically-based modeling into their research strategies. NEURON's computational engine employs special algorithms that achieve high efficiency by exploiting the structure of the equations that describe neuronal properties. It has functions that are tailored for conveniently controlling simulations, and presenting the results of real neurophysiological problems graphically in ways that are quickly and intuitively grasped. Instead of forcing users to reformulate their conceptual models to fit the requirements of a general purpose simulator, NEURON is designed to let them deal directly with familiar neuroscience concepts. Consequently, users can think in terms of the biophysical properties of membrane and cytoplasm, the branched architecture of neurons, and the effects of synaptic communication between cells. * helps users focus on important biological issues rather than purely computational concerns * has a convenient user interface * has a user-extendable library of biophysical mechanisms * has many enhancements for efficient network modeling * offers customizable initialization and simulation flow control * is widely used in neuroscience research by experimentalists and theoreticians * is well-documented and actively supported * is free, open source, and runs on (almost) everything | architecture, dendrites, ion channel, model, simulation, software, network, neuron |
is used by: IonChannelGenealogy is used by: neuronPM is used by: LFPy is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: neuroConstruct is related to: MUlti SImulation Coordinator is related to: NeuronVisio is related to: Neuroscience Gateway is related to: Topographica is related to: PyPNS has parent organization: Yale University; Connecticut; USA works with: SimTracker works with: NetPyNE |
nif-0000-00081 | http://www.nitrc.org/projects/neuron | SCR_005393 | neuron, NEURON for empirically-based simulations of neurons and networks of neurons | 2026-08-04 09:41:22 | 6095 | |||||||
|
PubBrain Resource Report Resource Website 1+ mentions |
PubBrain (RRID:SCR_005387) | PubBrain | data analysis service, analysis service resource, production service resource, service resource, database, data or information resource | A literature search and visualization tool that allows end users to enter any PubMed query and see that query rendered as a heatmap illustrating which regions of interest are most commonly mentioned within the search results. To use PubBrain, simply enter any valid PubMed search in the search box. | neuroanatomy |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: PubMed has parent organization: Poldracklab Portal |
NIMH RO1MH082795; NIMH PL1MH083271; NIDCR UL1DE019580; NCRR P20RR020750 |
nlx_144484 | http://www.nitrc.org/projects/pubbrain | SCR_005387 | PubBrain Database, pubbrain.org | 2026-08-04 09:41:22 | 8 | ||||||
|
Neuro Bureau Resource Report Resource Website 1+ mentions |
Neuro Bureau (RRID:SCR_005357) | Neuro Bureau | portal, blog, knowledge environment, community building portal, narrative resource, data or information resource | A neuroscience collaboratory that supports open neuroscience, which basically encompasses the unrestricted sharing of: analytic tools, computational resources, data, and knowledge. Its goal is to establish a spirit and forum for open neuroscience, and to facilitate the translation of that ethos into action by conducting successful large open interdisciplinary collaborative efforts such as releasing the preprocessed version of the ADHD-200 competition dataset. The Brain-Art Competition is likewise an effort to bring attention to the more aesthetically-oriented aspects of their field, and to publicize and encourage creative developments taking place at the nexus of art and neuroimaging. | neuroimaging, imaging, brain, neuroscience, data sharing, community, magnetic resonance |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: ADHD-200 Preprocessed Data is related to: ADHD-200 Sample is related to: Brainspell is parent organization of: brainhack.org is parent organization of: ADHD-200 Preprocessed Data is parent organization of: Brain-Art Competition is parent organization of: Neuro Bureau - Berlin Mind and Brain Sample |
Available for download | nlx_144424 | http://www.nitrc.org/projects/neurobureau | SCR_005357 | The Neuro Bureau | 2026-08-04 09:41:21 | 1 | ||||||
|
MIView Resource Report Resource Website |
MIView (RRID:SCR_000413) | MIView | data processing software, data analysis software, software resource, software application, image processing software, data visualization software | OpenGL based medical image viewer that contains useful tools such as a DICOM anonymizer and format conversion utility. MIView can read DICOM, Analyze/Nifti, and raster images, and can write Analyze/Nifti and raster images. | medical image viewer, DICOM anonymizer, format conversion, read DICOM, analyze Nifti, raster images, | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Free, Available for download, Freely available | nlx_155661 | SCR_000413 | 2026-08-04 09:40:07 | 0 | ||||||||
|
Dipy Resource Report Resource Website 10+ mentions |
Dipy (RRID:SCR_000029) | DIPY | data processing software, data analysis software, software resource, software application, software toolkit | Software Python package for analyzing diffusion data. Software library for analysis of diffusion MRI data. | MRI, magnetic resonance, diffusion data analysis, diffusion MRI data, diffusion MRI data analysis, |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Debian has parent organization: Neuroimaging in Python has parent organization: University of Cambridge; Cambridge; United Kingdom |
PMID:24600385 | Free, Available for download, Freely available | nlx_155745 | https://sources.debian.org/src/python-dipy/, http://www.nitrc.org/projects/dipy, http://elef.soic.indiana.edu/, https://github.com/nipy/dipy_web, | http://nipy.org/dipy/ | SCR_000029 | Diffusion Imaging In Python, NIPY Diffusion Imaging Analysis | 2026-08-04 09:40:02 | 15 | ||||
|
RapidArt Resource Report Resource Website |
RapidArt (RRID:SCR_000422) | RapidArt | data processing software, software application, software resource, data analysis software | Software for detecting artifacts and performing individual region-of-interest based statistical analysis of fMRI data and enables users of fMRI technology to produce more detailed, consistent and reliable results. | fMRI data analysis, detecting artifacts, individual region-of-interest based statistical analysis, nifti, os independent, python, fmri |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: Artifact Detection Tools |
Free, Freely available | nlx_155941 | SCR_000422 | 2026-08-04 09:40:07 | 0 | ||||||||
|
BrainFX Resource Report Resource Website |
BrainFX (RRID:SCR_000302) | BrainFX | data processing software, software application, software resource, workflow software | A developer tool to provide batch processing capability for pipelines. Users input data into a input table and run analysis with it. It is used to power CamBA and Brainwaver User interfaces. | java, magnetic resonance, nifti, os independent, development environment, software, workflow | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Free, Available for download, Freely available | nlx_155712 | http://www.nitrc.org/projects/brainfx | http://www.brainfx.org/ | SCR_000302 | 2026-08-04 09:40:06 | 0 | ||||||
|
CMFreg Resource Report Resource Website |
CMFreg (RRID:SCR_000171) | CMFreg | data processing software, registration software, software resource, software application, image analysis software | A sequence of fully automated voxel-wise rigid registration that utilizes stable structures of reference for assessment of craniofacial changes overtime.The major strengths of this method are that registration does not depend on the precision of the 3D surface models and that a stable structure of reference can be used without the simple best fit of all surfaces. | magnetic resonance | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Free, Available for download, Freely available | nlx_155534 | SCR_000171 | 2026-08-04 09:40:04 | 0 | ||||||||
|
Hitachi Optical Topography System Resource Report Resource Website |
Hitachi Optical Topography System (RRID:SCR_000865) | Hitachi Optical Topography System | material resource, instrument supplier | An instrumental supplier which provides researchers and clinicians with sophisticated All-in-One solutions in the field of neuroscience. | hardware, nirs, fnir, optical imaging, optical imaging, physiological recording, scanner, fnirs neuroimaging, ultrasound, mri, x-ray, radiography, computed tomography | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_155772 | http://www.nitrc.org/projects/hitachimedical | SCR_000865 | 2026-08-03 09:31:11 | 0 | |||||||
|
Maps4Mipav (Exploratory JIST) Resource Report Resource Website |
Maps4Mipav (Exploratory JIST) (RRID:SCR_000613) | Maps4Mipav, | software resource, source code | The exploratory development tree of Java Image Science Toolkit (JIST), an extension to the MIPAV (Medical Image Processing, Analysis, and Visualization) plug-in framework that allows the user to design and execute pipelines, which are multi-stage processing tasks.. New features and designs are tested here before general release into the JIST project. JIST was formerly known as the MedIC Automated Pipeline Scheduler (MAPS). | magnetic resonance |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: JIST: Java Image Science Toolkit is related to: MIPAV: Medical Image Processing and Visualization |
Free, Available for download, Freely available | nlx_151345 | SCR_000613 | MedIC Automated Pipeline Scheduler Medical Image Processing Analysis and Visualization | 2026-08-03 09:31:06 | 0 | |||||||
|
NIRx NIRS Neuroimaging Resource Report Resource Website 10+ mentions |
NIRx NIRS Neuroimaging (RRID:SCR_002491) | material resource, instrument supplier | Commercial technology solutions for NIRS neuroscience imaging applications. | hardware, image reconstruction, nirs, fnir, optical imaging, physiological recording, tomography, neuroimaging, adult, infant, child, imaging |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is parent organization of: NIRStar is parent organization of: NIRSPORT |
Restricted | nlx_155886 | http://www.nitrc.org/projects/nirx | SCR_002491 | NIRx Optical Neuroimaging | 2026-08-03 09:31:58 | 17 | |||||||
|
Bisque Resource Report Resource Website 10+ mentions |
Bisque (RRID:SCR_005564) | Bisque | software resource, source code | A scalable web-based system for biological image analysis, management and exploration. The Bisque system incorporates many features useful to imaging researchers from image capture to extensible image analysis and querying. At the core, bisque maintains a flexible database of images and experimental metadata. Image analyses can be incorporated into the system and deployed on clusters and desktops. Search and comparison of datasets by image data and content is supported. Novel semantic analyses are integrated into the system allowing high level semantic queries and comparison of image content. New features and testing of Bisque version: 0.5.1, among many others are: # Parallel execution of datasets # Rich interfaces for autogenerated module UI # Abstracted storage system for local, irods, etc.. They are using Mercurial for their source control system. This should be installed before proceeding. Browse source on-line, http://biodev.ece.ucsb.edu/projects/bisquik/browser Bisque Installation, http://biodev.ece.ucsb.edu/projects/bisquik/wiki/InstallationInstructions05 Bisque DOWNLOAD, http://biodev.ece.ucsb.edu/projects/bisquik/wiki/download, THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | image, biology, annotate, metadata, analysis, magnetic resonance |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Center for Bio-Image Informatics |
NSF ITR-0331697; NSF IIS-0808772 |
PMID:20031971 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_144653 | http://www.nitrc.org/projects/bisque | SCR_005564 | Bio-Image Semantic Query User Environment, Bisque - Bio-Image Semantic Query User Environment | 2026-08-03 09:32:53 | 20 | ||||
|
LONI Visualization Tool Resource Report Resource Website |
LONI Visualization Tool (RRID:SCR_000765) | LONI Viz, LONI_Viz, LOVE | data processing software, data visualization software, software application, software resource | A versatile 1D, 2D and 3D data viewer geared for cross-platform visualization of stereotactic brain data. It is a 3-D viewer that allows volumetric data display and manipulation of axial, sagittal and coronal views. It reads Analyze, Raw-binary and NetCDF volumetric data, as well as, Multi-Contour Files (MCF), LWO/LWS surfaces, atlas hierarchical brain-region labelings ( Brain Trees). It is a portable Java-based software, which only requires a Java interpreter and a 64 MB of RAM memory to run on any computer architecture. LONI_Viz allows the user to interactively overlay and browse through several data volumes, zoom in and out in the axial, sagittal and coronal views, and reports the intensities and the stereo-tactic voxel and world coordinates of the data. Expert users can use LONI_Viz to delineate structures of interest, e.g., sulcal curves, on the 3 cardinal projections of the data. These curves then may be use to reconstruct surfaces representing the topological boundaries of cortical and sub-cortical regions of interest. The 3D features of the package include a SurfaceViewer and a full real-time VolumeRenderer. These allow the user to view the relative positions of different anatomical or functional regions which are not co-planar in any of the axial, sagittal or coronal 2D projection planes. The interactive part of LONI_Viz features a region drawing module used for manual delineation of regions of interest. A series of 2D contours describing the boundary of a region in projection planes (axial, sagittal or coronal) could be used to reconstruct the surface-representation of the 3D outer shell of the region. The latter could then be resliced in directions complementary to the drawing-direction and these complementary contours could be loaded in all tree cardinal views. In addition the surface object could be displayed using the SurfaceViewer. A pre-loading data crop and sub-sampling module allows the user to load and view practically data of any size. This is especially important when viewing cryotome, histological or stained data-sets which may reach 1GB (109 bytes) in size. The user could overlay several pre-registered volumes, change intensity colors and ranges and the inter-volume opacities to visually inspect similarities and differences between the different subjects/modalities. Several image-processing aids provide histogram plotting, image-smoothing, etc. Specific Features: * Region description DataBase * Moleculo-genetic database * Brain anatomical data viewer * BrainMapper tool * Surface (LightWave objects/scenes) and Volume rendering tools * Interactive Contour Drawing tool Implementation Issues: * Applet vs. Application - the software is available as both an applet and a standalone application. The former could be used to browse data from within the LONI database, however, it imposes restrictions on file-size, Internet connection and network-bandwidth and client/server file access. The later requires a local install and configuration of the LONI_Viz software * Extendable object-oriented code (Java), computer architecture independent * Complete online software documentation is available at http://www.loni.ucla.edu/LONI_Viz and a Java-Class documentation is available at http://www.loni.ucla.edu/~dinov/LONI_Vis.dir/doc/LONI_Viz_Java_Docs.html | brain, atlas, visualization, gene mapping, atlas application, magnetic resonance, surface analysis |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Biositemaps has parent organization: Laboratory of Neuro Imaging |
Aging | NIA P50 AG16570; NLM 2R01 LM05639-06; NIA K08 AG100784; NCRR 2 P41 RR13642; NIMH 5 P01 MN52176; NSF DUE 0442992; NCRR U52 RR021813 |
PMID:16598642 | Free, Available for download, Freely available | nif-0000-23313 | http://www.nitrc.org/projects/incf_loni-viz | http://www.loni.ucla.edu/Software/LOVE | SCR_000765 | LONI Visualization Environment, LONI Viz environment, LOVE | 2026-08-04 09:40:13 | 0 | ||
|
NVM Resource Report Resource Website |
NVM (RRID:SCR_000600) | data processing software, data visualization software, software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 6, 2023. Software tool for quantitative neuroanatomical measurements in volumetric image data. Used to draw regions of interest for subsequent fMRI analysis. | quantitative, neuroanatomical, measurement, volumetric, image, data, draw, region, fMRI, analysis, morphology, |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Neuromorphometrics |
NIMH R43 MH60507; NIMH R44 MH60507; NIMH R43 MH084358 |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_149080 | http://www.nitrc.org/projects/nvm | SCR_000600 | 2026-08-04 09:40:10 | 0 | |||||||
|
LONI Pipeline Processing Environment Resource Report Resource Website 10+ mentions |
LONI Pipeline Processing Environment (RRID:SCR_001161) | LONI Pipeline | data processing software, software application, software resource, workflow software | A free workflow application primarily aimed at neuroimaging researchers that allows users to easily describe their executables in a graphical user interface (ie. create a module) and connect them together to create complex analyses all without having to code a single line in a scripting language. The Pipeline Client runs on your PC/Mac/Linux computer upon which you can create sophisticated processing workflows using a variety of commonly available executable tools (e.g. FSL, AIR, FreeSurfer, AFNI, Diffusion Toolkit, etc). The Distributed Pipeline Server can be installed on your Linux cluster and you can submit processing jobs directly to your own compute systems. Once you����??ve created a module for use in the LONI Pipeline, you can save it into your personal library and reuse it in other workflows you create by simply dragging and dropping it in. Because the LONI Pipeline is written in Java, you can work in whatever operating system suits you best. If there are tools that you need that can only work on another operating system, you can install a Pipeline server on that computer and connect from your client to do processing and analysis remotely. | workflow, neuroscience, afni brik, analyze, bshort, bfloat, computational neuroscience, dicom, imaging genomics, java, linux, macos, microsoft, minc, minc2, nifti, pet, spect, posix/unix-like, sunos/solaris, windows, windows nt/2000, atlas, birn, ccb, functional, na-mic, registration, segmentation, statistical, surface analysis, visual processing environment, volume, warping, image processing |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Biositemaps has parent organization: University of California at Los Angeles; California; USA |
NCRR P41 RR013642; NIMH R01 MH71940; NCRR U54 RR021813 |
PMID:12880830 | Free, Available for download, Freely available | nif-0000-00322 | http://www.nitrc.org/projects/pipeline | http://www.loni.ucla.edu/NCRR/Software/Pipeline.html | SCR_001161 | LONI Pipeline Environment | 2026-08-04 09:40:19 | 11 | |||
|
DicomBrowser Resource Report Resource Website 1+ mentions |
DicomBrowser (RRID:SCR_000864) | DicomBrowser | data processing software, standalone software, software resource, software application, image analysis software | A platform-independent desktop tool for inspecting DICOM header fields, editing DICOM header fields, viewing DICOM images, and transferring DICOM files to a DICOM receiver. DicomBrowser includes scriptable header editing to support various de-identification protocols. DicomBrowser is written in Java and uses ImageJ for image viewing and the dcm4che toolkit for much of its DICOM implementation. | dicom, java, magnetic resonance, system administrators |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Washington University in St. Louis; Missouri; USA |
Free, Available for download, Freely available | nlx_155743 | http://www.nitrc.org/projects/dicom_browser | SCR_000864 | 2026-08-04 09:40:15 | 3 | |||||||
|
imcalc: SPM batch image calculator Resource Report Resource Website 10+ mentions |
imcalc: SPM batch image calculator (RRID:SCR_000868) | imcalc | data processing software, software resource, software application, image analysis software, software toolkit | A collection of functions with batch functionality for SPM: * user entered expression (one set of volumes); * binarize non-zero voxels; * binarize/threshold each image; * binarize non-zero voxels, sum, rebinarize; * voxelwise calculations on pairs (add sub mult div ... etc.); * flip sign of all non-zero voxels; * x-flip image along y = 0; * mask images to a template; * T-to-Z transform; * Winsorize (cap) extreme values; * Z-score transform of image relative to its global mean and SD; * write single voxels to a .nii; * create a cluster image; * split cluster image into constituent images; * write hemisphere masks from template; * homotopic calculations; * replace zeros with __; * pad image with extra voxels; | magnetic resonance, statistical operation, batch functionality, spm |
is used by: SPM is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: National University of Singapore; Singapore; Singapore |
Free, Freely available | nlx_155854 | SCR_000868 | SPM batch image calculator, SPM batch image calculator (imcalc) | 2026-08-04 09:40:15 | 15 | |||||||
|
OpenElectrophy Resource Report Resource Website 10+ mentions |
OpenElectrophy (RRID:SCR_000819) | OpenElectrophy | data processing software, software application, software resource, data analysis software | Software Python module for electrophysiology data analysis. | neurophysiology, electrophysiology, python, intracellular, extracellular, data sharing, analysis sharing, neural signal, spike, oscillation, mysql, eeg, meg, electrocorticography |
uses: Neo is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Debian has parent organization: NeuralEnsemble |
NIBIB 5R24EB029173 | PMID:19521545 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_151873 | http://www.nitrc.org/projects/openelectrophy, https://sources.debian.org/src/openelectrophy/ | SCR_000819 | 2026-08-04 09:40:14 | 10 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
