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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Brain Architecture Project Resource Report Resource Website 10+ mentions |
Brain Architecture Project (RRID:SCR_004283) | topical portal, data or information resource, portal | Evolving portal that will provide interactive tools and resources to allow researchers, clinicians, and students to discover, analyze, and visualize what is known about the brain's organization, and what the evidence is for that knowledge. This project has a current experimental focus: creating the first brainwide mesoscopic connectivity diagram in the mouse. Related efforts for the human brain currently focus on literature mining and an Online Brain Atlas Reconciliation Tool. The primary goal of the Brain Architecture Project is to assemble available knowledge about the structure of the nervous system, with an ultimate emphasis on the human CNS. Such information is currently scattered in research articles, textbooks, electronic databases and datasets, and even as samples on laboratory shelves. Pooling the knowledge across these heterogeneous materials - even simply getting to know what we know - is a complex challenge that requires an interdisciplinary approach and the contributions and support of the greater community. Their approach can be divided into 4 major thrusts: * Literature Curation and Text Mining * Computational Analysis * Resource Development * Experimental Efforts | central nervous system, connectivity, mapping, model, neuroanatomy, organism, post-mortem, structure, nervous system, structure, human, mouse, brain, zebra finch, addiction gene, addiction |
is used by: BICCN lists: Allen Institute for Brain Science lists: University of California at Los Angeles; California; USA is related to: Mouse Brain Architecture Project is related to: BICCN Anatomy and Morphology Project is related to: Allen Institute for Brain Science has parent organization: Cold Spring Harbor Laboratory is parent organization of: Human Brain Connectivity Database is parent organization of: OBART is parent organization of: Zebrafinch Brain Architecture Project is parent organization of: Mouse Brain Architecture Project |
W. M. Keck Foundation ; NIMH ; NIDA ; Crick-Clay Professorship in Biomathematics at CSHL ; Mathers Foundation ; Simons Foundation |
Free, Public | nlx_143664 | SCR_004283 | BrainArchitecture.org, BrainArchitecture | 2025-04-19 06:42:14 | 13 | |||||||
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OBO Relation Ontology Resource Report Resource Website |
OBO Relation Ontology (RRID:SCR_004285) | OBO REL, RO | ontology, controlled vocabulary, data or information resource | The OBO Relation Ontology is an ontology of core relations for use by OBO Foundry ontologies. To enhance the treatment of relations in biomedical ontologies we advance a methodology for providing consistent and unambiguous formal definitions of the relational expressions used in such ontologies in a way designed to assist developers and users in avoiding errors in coding and annotation. The resulting Relation Ontology can promote interoperability of ontologies and support new types of automated reasoning about the spatial and temporal dimensions of biological and medical phenomena. The OBO Relation ontology is undergoing substantial changes: * Core domain-independent relations will live in BFO * Biology specific relations (defined in terms of core relations) will live in RO | has parent organization: OBO | PMID:15892874 | nlx_33226 | SCR_004285 | Relation Ontology, OBO RO | 2025-04-19 06:42:14 | 0 | ||||||||
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MSG Resource Report Resource Website 1+ mentions |
MSG (RRID:SCR_004161) | MSG | software resource | A pipeline of scripts to assign ancestry to genomic segments using next-gen sequence data. This method can identify recombination breakpoints in a large number of individuals simultaneously at a resolution sufficient for most mapping purposes, such as quantitative trait locus (QTL) mapping and mapping of induced mutations. | next generation sequencing, genotyping, genetic mapping, ancestry, genome |
is listed by: OMICtools has parent organization: Princeton University; New Jersey; USA |
PMID:21233398 | OMICS_01551 | SCR_004161 | Multiplexed shotgun genotyping, Multiplexed shotgun genotyping (MSG), MSG: Multiplexed Shotgun Genotyping | 2025-04-19 06:42:10 | 2 | |||||||
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UniProtKB Keywords Resource Report Resource Website 100+ mentions |
UniProtKB Keywords (RRID:SCR_004313) | SP KW | database, ontology, controlled vocabulary, data or information resource | UniProtKB entries are tagged with keywords that can be used to retrieve particular subsets of entries. There are 10 categories of keywords: Biological process Cellular component Coding sequence diversity Developmental stage Disease Domain Ligand Molecular function Post-translation modification Technical term You may browse by hierarchy, search in Keywords, or list all keywords. By default, searching the keywords will look for matches in both name and definition. | has parent organization: UniProtKB | nlx_32497 | SCR_004313 | 2025-04-19 06:42:16 | 262 | ||||||||||
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MicroBrightfield, Inc. Resource Report Resource Website 50+ mentions |
MicroBrightfield, Inc. (RRID:SCR_004314) | MBF | commercial organization | A provider for commercial products for analyzing neuronal morphology, stereology, etc. | neurolucida, neuronal morphology, neuronal stereology | Organization | Wikidata: Q6714719, grid.421345.5, nif-0000-00110 | https://ror.org/02zynam48 | SCR_004314 | mbf Bioscience, MicroBrightfield | 2025-04-19 06:42:16 | 53 | |||||||
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University of Pennsylvania; Philadelphia; USA Resource Report Resource Website 1+ mentions |
University of Pennsylvania; Philadelphia; USA (RRID:SCR_004275) | UPenn, Penn State | university | University of Pennsylvania is private Ivy League research university located in University City neighborhood of Philadelphia, Pennsylvania. Established in 1740, UPenn has 4 undergraduate schools and 12 graduate schools. | undergraduate, graduate, master's, doctoral, phD, institution, university |
uses: Research Accelerator is affiliated with: Diabetes Research Centers is related to: International AMD Genetics Consortium is related to: Clinical and Translational Science Awards Consortium is related to: Cooperative Human Tissue Network is related to: PIVOT software is related to: Urinary Stone Disease Research Network is parent organization of: Penn Cell and Developmental Biology Zebrafish Core is parent organization of: Penn Clinical Research Computing Unit is parent organization of: Penn Community Outreach Using Health System Informatics Core is parent organization of: Penn Hippocampus Atlas is parent organization of: NIH/Merial Veterinary Scholars Program is parent organization of: Penn Diabetes Research Center Mouse Phenotyping Physiology and Metabolism Core is parent organization of: Penn Research Instrumentation Shop is parent organization of: Penn Small Animal Imaging Facility: PET/SPECT/CT Sub-Core is parent organization of: Penn Translational Biomarker Core is parent organization of: Diffusion Tensor Imaging ToolKit is parent organization of: ApiDots is parent organization of: Hierarchical Attribute Matching Mechanism for Elastic Registration is parent organization of: ITK-SNAP is parent organization of: Database of Transcribed Sequences is parent organization of: PennCNV is parent organization of: Brain lesion segmentation tool using SVM is parent organization of: RNA Abundance Database is parent organization of: Cognitive Electrophysiology Data Portal is parent organization of: ANTS - Advanced Normalization ToolS is parent organization of: Atrophy Simulation Package is parent organization of: 3DViewnix is parent organization of: miRGen is parent organization of: OrthoMCL DB: Ortholog Groups of Protein Sequences is parent organization of: University of Pennsylvania School of Medicine Penn Diabetes Research Center Pancreatic Islet Cell Biology Core Facility is parent organization of: BRAID is parent organization of: AHEAD is parent organization of: Penn Laser Confocal Microscope Core is parent organization of: DRAMMS is parent organization of: fMRI Grocer is parent organization of: Penn Automated Claims and Medical Record Databases is parent organization of: CHOP Biostatistics and Data Management Core is parent organization of: CHOP CTRC Behavioral Neurosciences Core is parent organization of: CHOP CTRC Cardiovascular Imaging Core is parent organization of: CHOP CTRC Nutrition Core Nutrition Assessment is parent organization of: CHOP CTRC Ophthalmology Core is parent organization of: CHOP Clinical Trials Office is parent organization of: CHOP Flow Cytometry Core Laboratory is parent organization of: CHOP Human Embryonic stem cell/induced pluripotent stem cell Core is parent organization of: CHOP Nucleic Acid/Protein Core is parent organization of: CHOP Pathology Core Laboratories is parent organization of: Penn/CHOP CTRC Informatics Services Core is parent organization of: Monell Behavioral and Physiological Phenotyping Core is parent organization of: Monell Chemosensory Receptor Signaling Core is parent organization of: Monell Genotyping and DNA/RNA Analysis Core is parent organization of: Monell Histology and Cellular Localization Core is parent organization of: Penn Mass Spectrometry Molecular Profiling Core is parent organization of: Penn BioMechanics Core Facility is parent organization of: Penn Biological Chemistry Resource Center is parent organization of: Penn Cancer Histology Core is parent organization of: Penn Cell Center Services Facility is parent organization of: Penn Cell Center Stockroom is parent organization of: Penn Cell and Developmental Biology Microscopy Core is parent organization of: Penn Chemistry NMR Facility is parent organization of: Penn Clinical Cell and Vaccine Production Facility is parent organization of: Penn Community Engagement and Research Core is parent organization of: Penn/CHOP CTRC Bionutrition Research Core Dietary Assessment is parent organization of: Penn Electron Microscopy Resource Laboratory is parent organization of: Penn Flow Cytometry and Cell Sorting Resource Laboratory is parent organization of: Penn Investigational Drug Service is parent organization of: Penn Gene Targeting Service is parent organization of: University of Pennsylvania Molecular Profiling Facility is parent organization of: Penn High-Throughput Sequencing Facility is parent organization of: University of Pennsylvania High-performance Computing is parent organization of: Penn Histology and Gene Expression Core is parent organization of: Penn Human Immunology Core is parent organization of: Penn Interventional Radiology Animal Catheter Lab is parent organization of: Penn Mass Spectrometry Facility is parent organization of: University of Pennsylvania Molecular Profiling Facility Bioinformatics is parent organization of: Penn NBIC Probe Facility is parent organization of: Penn Neurobehavior Testing Core is parent organization of: Penn Next-Generation Sequencing Core is parent organization of: Penn Proteomics and Systems Biology Core is parent organization of: Penn Diabetes Research Center Radioimmunoassay and Biomarkers Core Facility is parent organization of: Penn Regional Nanotechnology Facility is parent organization of: Penn Small Animal Imaging Facility is parent organization of: Penn Small Animal Imaging Facility: MRI/MRS Sub-Core is parent organization of: Penn Small Animal Imaging Facility: Optical/Bioluminescence Sub-Core is parent organization of: Penn Small Animal Imaging Facility: Ultrasound Sub-Core is parent organization of: Pennsylvania University Perelman School of Medicine Stem Cell and Xenograft Core Facility is parent organization of: Penn Diabetes Research Center Transgenic and Chimeric Mouse Core Facility is parent organization of: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Vector Core Facility is parent organization of: Penn/CHOP CTRC Research Nurse Core is parent organization of: Penn/CHOP CTRC Sleep Core is parent organization of: Penn/CHOP CTRC Study Design and Biostatistics Core is parent organization of: Penn/CHOP CTRC Translational Core Laboratories is parent organization of: Penn/CHOP Office of Human Subject Recruitment and Protection is parent organization of: TESS: Transcription Element Search System is parent organization of: CoRAL - Classification of RNAs by Analysis of Length is parent organization of: University of Pennsylvania Labs and Facilities is parent organization of: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA is parent organization of: SBIA is parent organization of: TalkBank is parent organization of: IsoformEx is parent organization of: Neuron-C is parent organization of: GIMME is parent organization of: DTI-TK is parent organization of: Referral Center for Animal Models of Human Genetic Diseases is parent organization of: MAJIQ is parent organization of: ReBATE is parent organization of: PennAI is parent organization of: ITK-SNAP is parent organization of: Pharmacogenetics of Nicotine Addiction Treatment is parent organization of: 4D Genome is parent organization of: AsPredicted is parent organization of: HistoloZee is parent organization of: University of Pennsylvania School of Veterinary Medicine Center for Host Microbial Interactions Core Facility is parent organization of: University of Pennsylvania Electronic Phenotyping Resource Core Facility is parent organization of: University of Pennsylvania Penn Vet Imaging Core Facility is parent organization of: University of Pennsylvania School of Dental Medicine Tissue Processing Laboratory Core Facility is parent organization of: University of Pennsylvania Institute for RNA Innovation Engineered mRNA and Targeted Nanomedicine Core Facility is parent organization of: University of Pennsylvania Institute for Immunology and Immune Health I3H Core Facility is parent organization of: University of Pennsylvania Institute for RNA Innovation Targeting Core Facility is parent organization of: University of Pennsylvania Bollinger Digital Fabrication Laboratory Core Facility |
Wikidata:Q49117, SCR_022445, grid.25879.31, ISNI:0000 0004 1936 8972, nlx_24937, Crossref funder ID:100006920 | https://ror.org/00b30xv10 | SCR_004275 | University of Pennsylvania | 2025-04-19 06:42:14 | 5 | |||||||
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Brain Tumour Foundation of Canada Resource Report Resource Website |
Brain Tumour Foundation of Canada (RRID:SCR_004158) | Brain Tumour Foundation of Canada | institution | Brain Tumour Foundation of Canada is a dedicated team of volunteers, patients, survivors, family members, health care professionals and staff, determined to make the journey with a brain tumor one full of hope and support. We work collaboratively to serve the needs of those Canadians affected by all types of brain tumors. Information, education and support is available and research continues into the cause of and a cure for brain tumors. Every year, thousands of Canadians affected by brain tumors find emotional support and comfort while gaining a better understanding and knowledge of their disease through a range of programs and services available across the country. This includes: up-to-date brain tumor information material, numerous education events and support groups. Important brain tumor research is also supported through annual grants, a fellowship and the brain tumour tissue bank. We welcome donations, large or small. Charitable Registration #BN118816339RR0001 | brain, tumor, cancer, human | is related to: Lawson Brain Tumour Tissue Bank | individuals ; corporations ; employee groups ; memorial gifts |
ISNI: 0000 0004 5900 0419, nlx_143579, Crossref funder ID: 501100000238, grid.478522.e | https://ror.org/04w23ys68 | SCR_004158 | Brain Tumor Foundation of Canada | 2025-04-19 06:42:10 | 0 | ||||||
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Multiple Sclerosis Society Resource Report Resource Website 10+ mentions |
Multiple Sclerosis Society (RRID:SCR_004153) | MS Society | nonprofit organization | The UK''s leading MS charity that provides information and support, funding research and fighting for change. We''re a democratic organization: one member, one vote. We fund research, give grants, campaign for change, provide information and support, invest in MS specialists and lend a listening ear to those who need it. The UK''s biggest MS charity. * 38,000 members have a say in how we''re run. * 9000 volunteers give a million hours every year. * 550 staff work in all four nations of the UK. * Over 300 branches support people with MS locally. * One aim: to beat MS. Our national offices in England, Scotland, Wales and Northern Ireland and our network of 300 branches support people affected by MS locally. | Crossref funder ID: 501100000381, ISNI: 0000 0001 0665 6519, nlx_143577, Wikidata: Q6934907, grid.453295.c | https://ror.org/043fwdk81 | SCR_004153 | 2025-04-19 06:42:10 | 16 | ||||||||||
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Babel Resource Report Resource Website 100+ mentions |
Babel (RRID:SCR_004307) | Babel | data processing software, data analysis software, software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documentedt on January 10, 2023. Software that implements babel routines for identifying unusual ribosome protected fragment counts given mRNA counts | windows, macos x |
is listed by: OMICtools has parent organization: University of California at San Francisco; California; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_01530 | SCR_004307 | babel: Ribosome profiling data analysis | 2025-04-19 06:42:15 | 173 | |||||||
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PerM Resource Report Resource Website 50+ mentions |
PerM (RRID:SCR_004223) | software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Software package to perform highly efficient genome scale alignments for hundreds of millions of short reads produced by the ABI SOLiD and Illumina sequencing platforms. It capable of providing full sensitivity for alignments within 4 mismatches for 50bp SOLID reads and 9 mismatches for 100bp Illumina reads.Efficient mapping of short sequencing reads with periodic full sensitive spaced seeds. | Short sequencing mapping, short sequencing read, next-generation sequencing, genome, alignment, short read, abi, solid, illumina, , bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools is related to: Clippers has parent organization: Google Code has parent organization: University of Southern California; Los Angeles; USA |
PMID:19675096 DOI:10.1093/bioinformatics/btp486 |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00675, biotools:perm | https://bio.tools/perm https://sources.debian.org/src/perm/ |
SCR_004223 | PERiodic seed Mapping, Periodic seed Mapping | 2025-04-19 06:42:12 | 59 | ||||||
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EGAPP Resource Report Resource Website 1+ mentions |
EGAPP (RRID:SCR_004189) | EGAPP | topical portal, data or information resource, portal | Initiative to develop a systematic, evidence-based process for evaluating genetic tests and other applications of genomic technology that are rapidly moving from research to use in clinical practice. A key objective of this process is to provide objective, timely, and credible information that is clearly linked to the scientific evidence on specific applications of genetic and genomic tests. The primary focus of EGAPP activities is an independent, nonfederal expert panel, the EGAPP Working Group. Other components of the EGAPP initiative include a federal interagency, the CDC staff and consultants, and an EGAPP initiative evaluation team. | genetic test, genomics, clinical, genomic technology, evaluation, public health |
is listed by: OMICtools has parent organization: Centers for Disease Control and Prevention |
OMICS_01538 | SCR_004189 | Evaluation of Genomic Applications in Practice and Prevention (EGAPP), Evaluation of Genomic Applications in Practice and Prevention | 2025-04-19 06:42:11 | 1 | ||||||||
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Canadian Virtual Brain Tumour Bank Resource Report Resource Website |
Canadian Virtual Brain Tumour Bank (RRID:SCR_004221) | CVBTB | tissue bank, material resource, biomaterial supply resource, brain bank | THIS RESOURCE IS NO LONGER IN SERVICE, documented May 10, 2017. The mission of the Canadian Virtual Brain Tumour Bank (CVBTB) is to facilitate clinical, molecular and translational research through the provision of well-characterized tissue linked to clinical data and to become a standardized national tissue resource whereby scientific needs are met, addressed and accelerated through a common public accessible core the CVBTB. Recognizing the need to encourage systemic banking of brain tumor tissues throughout the country and to link banks of brain tumor tissue samples with academic and scientific institutions that require these samples, the CVBTB was established. Under the sponsorship of Schering Plough Canada Inc. and in association with the Canadian Brain Tumour Consortium (CBTC), the CVBTB looks to act as a resource for all researchers to provide them with information on the types of brain tumor tissue samples available and to direct them to the tumor tissue banking sites holding these samples. The CVBTB also looks to provide information on standard operating procedures regarding aspects of tumor tissue banking such as tissue accrual, storage and shipment and the processing of blood samples such as serum and lymphocytes. The CVBTB currently consists of four brain tumour tissue banking sites (Toronto Western Hospital - Toronto, Ontario; London Health Sciences Centre - London, Ontario; McGill University - Montreal, Quebec; University of Calgary - Calgary, Alberta) and is continuously looking for more institutions to be a part of the CVBTB. If your institution would like to become a part of the CVBTB, please contact the CVBTB coordinator. | virtual tissue bank, brain tumor, tumor bank, standardized tissue bank |
is listed by: One Mind Biospecimen Bank Listing has parent organization: University of Toronto; Ontario; Canada |
Tumor | Schering Plough Canada Inc. | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_24047 | SCR_004221 | Canadian Virtual Brain Tumor Bank | 2025-04-19 06:42:12 | 0 | |||||
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Schistosoma mansoni Database Resource Report Resource Website 10+ mentions |
Schistosoma mansoni Database (RRID:SCR_004341) | SchistoDB | data repository, storage service resource, database, service resource, data or information resource | SchistoDB is a genomic database for the parasitic organism Schistosoma mansoni, one of the major causative agents of schistosomiasis worldwide. It currently incorporates sequences and annotation for S. mansoni in a single user-friendly database. Several genomic scale analyses are available as well as ESTs, oligonucleotides, metabolic pathways and drugs. Make your data available: If you''d like to have your updates and/or datasets integrated in SchistoDB, drop us an email. | FASEB list | has parent organization: Rene Rachou Research Center - FIOCRUZ; Belo Horizonte; Brazil | NIDA 5D43TW007012-03 | PMID:18842636 | nif-0000-03438 | SCR_004341 | 2025-04-19 06:42:17 | 36 | |||||||
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Alberta Cancer Foundation Resource Report Resource Website 1+ mentions |
Alberta Cancer Foundation (RRID:SCR_004224) | ACF | institution | The Alberta Cancer Foundation is more than a charity. It''s a movement for cancer-free lives today, tomorrow and forever. It''s a movement of those who know a cancer-free future is possible and who won''t settle for some day. It''s a movement of those who stand with Albertans who have no choice but to stand up to cancer. It''s a movement of those who know something can be done and are willing to do it. For those facing cancer today, in honour of those lost to cancer, and for generations to come, we promise progress. Our mission is to deliver progress in cancer research, prevention, treatment and care by generating community investment for Alberta''s coordinated research strategy, the Cross Cancer Institute, Tom Baker Cancer Centre and 15 other cancer centres throughout the province. The Alberta Cancer Foundation is a Registered Charity - Business Number 11878 0477 RR0001. Your dollar fights cancer on every front: research, prevention, screening, early diagnosis, education, treatment and care. | grid.427879.7, nlx_143639, Crossref funder ID: 501100000001 | https://ror.org/01k1b2g25 | SCR_004224 | 2025-04-19 06:42:12 | 7 | ||||||||||
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Wellcome Images Resource Report Resource Website |
Wellcome Images (RRID:SCR_004181) | Wellcome Images | data repository, storage service resource, database, image repository, image collection, service resource, data or information resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 9, 2023.Digital collection of images, with themes ranging from medical and social history to contemporary healthcare and biomedical science. The collection contains historical images from the Wellcome Library collections, Tibetan Buddhist paintings, ancient Sanskrit manuscripts written on palm leaves, beautifully illuminated Persian books and much more. The Biomedical Collection holds over 40 000 high-quality images from the clinical and biomedical sciences. Selected from the UK''s leading teaching hospitals and research institutions, it covers disease, surgery, general healthcare, sciences from genetics to neuroscience including the full range of imaging techniques. They are always looking for new high quality biomedical images from scientific researchers, clinical photographers and artists in any field of science or medicine. As a contributor you retain your original material and copyright, and receive commission and full credit each time your images are used. The annual Wellcome Images awards (previously known as Biomedical Images Awards) reward contributors for their outstanding work and winners are chosen by a panel of experts. The resulting public exhibitions are always extremely popular and receive widespread acclaim. All images on the Wellcome Images site are available free for use in: * private study and non-commercial research * examination papers * criticism and review, this applies only where there are no multiple copies made * theses submitted by a student at a higher or further education institution for the purposes of securing a degree * personal use by private individuals | biomedical, clinical, disease, surgery, healthcare, genetics, neuroscience, imaging, science, medicine, history, painting, manuscript | Wellcome Trust | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_143611 | SCR_004181 | 2025-04-19 06:42:11 | 0 | ||||||||
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UCSF DataShare Resource Report Resource Website 1+ mentions |
UCSF DataShare (RRID:SCR_004340) | UCSF DataShare | data repository, storage service resource, database, service resource, catalog, data or information resource | Platform to facilitate sharing, discovery, and secure access to UCSF biomedical data. It''s powered by the Dataverse Network platform, which supports a variety of data types, as well as attribution and licensing needs. Researchers may share datasets, discover data from other labs, and reuse data. Links to tools and information that help scientists properly organize, manage, and document their datasets are also provided. | biomedical data, neuroimaging, mri, cognitive impairment, dementia, data sharing, data set |
uses: Dataverse Network Project has parent organization: University of California at San Francisco; California; USA |
Aging | Open unspecified license, The community can contribute to this resource, (UCSF-affiliated researcher), Data Use Agreement, Acknowledgement required | nlx_35596 | SCR_004340 | UCSF Dataverse Network | 2025-04-19 06:42:17 | 1 | ||||||
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HLASeq Resource Report Resource Website |
HLASeq (RRID:SCR_004185) | HLASeq | software resource | An open-source software tool for accurate genotyping the human HLA genes from Illumina GA high-throughput sequencing data. | genotyping, hla, next generation sequencing, gene, command-line, python |
is listed by: OMICtools has parent organization: SourceForge |
GNU General Public License, v3 | OMICS_01543 | SCR_004185 | 2025-04-19 06:42:11 | 0 | ||||||||
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BrainSpan Resource Report Resource Website |
BrainSpan (RRID:SCR_004219) | atlas, expression atlas, data or information resource | Atlas of developing human brain for studying transcriptional mechanisms involved in human brain development. One of the BrainSpan datasets, Exon microarray summarized to genes, is presented. It is a downloadable archive of files containing normalized RNA-Seq expression values for analysis. | brain, development, brain development, exon, microarray, gene, rna-seq, expression value, expression |
is used by: NIF Data Federation has parent organization: Allen Human Brain Atlas: BrainSpan (Atlas of the Developing Brain) |
Free, Freely available | nlx_98194, nlx_86215, SCR_004877, SCR_005029, SCR_004344, nlx_37081, nlx_2397 | http://brainspan.org/rnaseq/downloads.html?format=html http://brainspan.org/docs.html |
http://brainspan.org/docs.html | SCR_004219 | BrainSpan: RNA-Seq exons, BrainSpan - Exon microarray summarized to genes | 2025-04-19 06:42:12 | 0 | ||||||
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Nathan S. Kline Institute for Psychiatric Research; New York; USA Resource Report Resource Website 1+ mentions |
Nathan S. Kline Institute for Psychiatric Research; New York; USA (RRID:SCR_004334) | NKI | institution | New York State-funded research Institute, located in Orangeburg, New York. |
is related to: New York University; New York; USA is parent organization of: Automatic Registration Toolbox is parent organization of: NKI-RS Enhanced Sample is parent organization of: NKI-RS Multiband Imaging Test-Retest Pilot Dataset |
nlx_151961, grid.250263.0, Wikidata: Q6969183, ISNI: 0000 0001 2189 4777 | https://ror.org/01s434164 | SCR_004334 | Nathan Kline Institute for Psychiatric Research, Nathan Kline Institute, Nathan S. Kline Institute for Psychiatric Research | 2025-04-19 06:42:16 | 1 | ||||||||
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PASS-bis Resource Report Resource Website |
PASS-bis (RRID:SCR_004176) | PASS-bis | software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 9, 2023. A bisulfite aligner suitable for whole methylome analysis of Illumina and SOLiD reads. |
is listed by: OMICtools is related to: PASS |
PMID:23162053 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00587 | SCR_004176 | 2025-04-19 06:42:11 | 0 |
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