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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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TWiV - This Week in Virology Resource Report Resource Website |
TWiV - This Week in Virology (RRID:SCR_006097) | TWiV | data or information resource, podcast, narrative resource | This Week in Virology (TWiV) is a podcast - or netcast, as some prefer to call them, since you don''t need an iPod to listen - about viruses - the kind that make you sick. Professors Vincent Racaniello, Dickson Despommier, Rich Condit and science writer Alan Dove and guests deconstruct viruses, how they cause illness, and how you can prevent infections. It was begun in September 2008 by Vincent Racaniello and Dick Despommier, two science Professors at Columbia University Medical Center. Their goal was to have an informal yet informative conversation about viruses which would be accessible to everyone, no matter what their science background. We wanted to eventually bring other virologists into the conversation, to make it more varied and interesting. Alan Dove, a science writer, joined us late in 2008; Rich Condit, a poxvirologist, joined in 2009, and Kathy Spindler, an adenovirologist, joined in 2012. We''ve had quite a few guests on the show and we''re always trying to get more. Transcripts A few readers have been kind enough to produce transcripts for several TWiV episodes. | virus, infection, illness, virology, transcript | nlx_151567 | SCR_006097 | This Week in Virology | 2026-08-11 09:41:21 | 0 | |||||||||
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Bloomington Drosophila Stock Center Resource Report Resource Website 1000+ mentions |
Bloomington Drosophila Stock Center (RRID:SCR_006457) | BDSC | biomaterial supply resource, organism supplier, material resource | Collects, maintains and distributes Drosophila melanogaster strains for research. Emphasis is placed on genetic tools that are useful to a broad range of investigations. These include basic stocks of flies used in genetic analysis such as marker, balancer, mapping, and transposon-tagging strains; mutant alleles of identified genes, including a large set of transposable element insertion alleles; defined sets of deficiencies and a variety of other chromosomal aberrations; engineered lines for somatic and germline clonal analysis; GAL4 and UAS lines for targeted gene expression; enhancer trap and lacZ-reporter strains with defined expression patterns for marking tissues; and a collection of transposon-induced lethal mutations. | RIN, Resource Information Network, disease model, deficiency, deletion, transposon insertion, sequenced strain, duplication, protein trap, human disease model, transposon, fly, gene, genetic, genetic analysis, database, deficiency, germline, insertion, invertebrate, scientist, somatic, stock, transposon, mutation, genetic construct, FASEB list, RRID Community Authority |
is used by: Integrated Animals is listed by: One Mind Biospecimen Bank Listing is listed by: Resource Information Network is related to: One Mind Biospecimen Bank Listing is related to: NIF Data Federation has parent organization: Indiana University; Indiana; USA |
Human disease model | NIH Office of the Director P40 OD018537 | nif-0000-00241 | https://orip.nih.gov/comparative-medicine/programs/invertebrate-models | http://flystocks.bio.indiana.edu/bloomhome.htm | SCR_006457 | Bloomington Drosophila Stock Center at Indiana University | 2026-08-11 09:41:20 | 3419 | ||||
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Science Podcast Resource Report Resource Website |
Science Podcast (RRID:SCR_006453) | Science Podcast | data or information resource, podcast, narrative resource | The Science Podcast takes you on a tour of some interesting stories in the journal and online. * MP3 of this show * Transcript of this show * Subscribe to the Science Podcast RSS Feed |
is used by: NIF Data Federation is related to: Integrated Podcasts |
nlx_36122 | SCR_006453 | Science Podcasts | 2026-08-11 09:41:24 | 0 | |||||||||
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Autoimmune Lymphoproliferative Syndrome Information Resource Report Resource Website 1+ mentions |
Autoimmune Lymphoproliferative Syndrome Information (RRID:SCR_006451) | NIAID ALPS | data or information resource, topical portal, portal, disease-related portal | A disease-related portal about Autoimmune Lymphoproliferative Syndrome (ALPS) including research in the following categories: Medical and Genetic Description, Database of Mutations, Database of ALPS-FAS Mutations, and Molecular Pathways. Autoimmune Lymphoproliferative Syndrome (ALPS) is a recently recognized disease in which a genetic defect in programmed cell death, or apoptosis, leads to breakdown of lymphocyte homeostasis and normal immunologic tolerance. It is an inherited disorder of the immune system that affects both children and adults. In ALPS, unusually high numbers of white blood cells called lymphocytes accumulate in the lymph nodes, liver, and spleen, which can lead to enlargement of these organs. Database of Mutations * All existing ALPS-FAS mutations (NIH Web site) * ALPS-FAS * ALPS Type Ia (most common type) ** Reported FAS (TNFRSF6) mutations causing ALPS ** Distribution of FAS (TNFRSF6) mutations ** FAS (TNFRSF6) polymorphisms * ALPS Type II | apoptosis, autoimmune lymphoproliferative syndrome, double negative t cell, lymphocyte, pathway, immune system, clinical trial, child, adult, mutation | Autoimmune Lymphoproliferative Syndrome | NIAID | nif-0000-02542 | http://research.nhgri.nih.gov/ALPS/ | SCR_006451 | NIAID Autoimmune Lymphoproliferative Syndrome (ALPS), NIAID Autoimmune Lymphoproliferative Syndrome, ALPSbase, Autoimmune Lymphoproliferative Syndrome (ALPS) | 2026-08-11 09:41:21 | 1 | ||||||
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ePRISM Resource Report Resource Website 1+ mentions |
ePRISM (RRID:SCR_006386) | ePRISM | data management software, software resource, software application | Software application that supports the execution of multivariable prediction models with patient-specific characteristics so that personalized estimates of outcomes, often as a function of alternative treatments, can be generated within the routine flow of patient care. This can support evidence-based, shared medical decision-making to improve the safety, outcomes and cost-effectiveness of care. The current application is in the setting of generating individualized informed consent documents for PCI. However, the tool can support that translation of novel biomarkers, genetics and pharmacogenomic interactions into clinical care. The platform gives healthcare providers instantaneous access to the latest clinical prediction models coupled with rich visualization tools. These models may come from national organizations, outcomes researchers or a specific institution. In addition to decision support applications, it can be used to rapidly create personalized educational materials, patient letters, informed consent documents and a broad array of other items that can help elevate the quality of healthcare delivery. | healthcare, clinical, prediction model, visualization, platform |
is related to: Clinical and Translational Science Awards Consortium has parent organization: University of Kansas Medical Center; Kansas; USA |
nlx_152166 | SCR_006386 | Patient Refined Information Services Manager | 2026-08-11 09:41:20 | 3 | ||||||||
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Shanoir Resource Report Resource Website 1+ mentions |
Shanoir (RRID:SCR_006286) | Shanoir | data management software, software resource, software application | An open source data sharing and visualization platform for neuroimaging data, that uses the OntoNeuroLOG ontology. Shanoir (Sharing NeurOImaging Resources) is an open source neuroinformatics platform designed to share, archive, search and visualize neuroimaging data. It provides a user-friendly secure web access and offers an intuitive workflow to facilitate the collecting and retrieving of neuroimaging data from multiple sources and a wizard to make the completion of metadata easy. Shanoir comes with many features such as anonymization of data, support for multicenter clinical studies on subjects or group of subjects. Shanoir offers an ontology-based data organization (OntoNeuroLOG). Among other things, this facilitates the reuse of data and metadata, the integration of processed data and provides traceability trough an evolutionary approach. Shanoir allows researchers, clinicians, PhD students and engineers to undertake quality research projects with an emphasis on remote collaboration. As a secured J2EE web application, it therefore allows you safely store and archive, with no more requirements than a computer with an internet connection. Furthermore, Shanoir is not only a web application: it is also a complete neuroinformatics platform in which you can easily integrate your existing processing tools or develop your own ones: see ShanoirTk. Shanoir is a project carried out by the VisAGeS Team, based at IRISA (INRIA Rennes - Bretagne Atlantique Research Centre). This software is released under QPL 1.0 license. | neuroimaging, adult human, neuroinformatics, platform, web application, data sharing, visualization | has parent organization: National Institute for Research in Computer Science and Control; Brittany; France | QPL 1.0 license | nlx_151930 | SCR_006286 | Sharing NeurOImaging Resources | 2026-08-11 09:41:19 | 1 | |||||||
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NIST - National Institute of Standards and Technology Resource Report Resource Website 100+ mentions |
NIST - National Institute of Standards and Technology (RRID:SCR_006440) | NIST | data or information resource, portal, funding resource, organization portal | Founded in 1901, NIST (National Institute of Standards and Technology) is a non-regulatory federal agency within the U.S. Department of Commerce. NIST''s mission is to promote U.S. innovation and industrial competitiveness by advancing measurement science, standards, and technology in ways that enhance economic security and improve our quality of life. NIST carries out its mission through the following programs: * the NIST Laboratories, conducting world-class research, often in close collaboration with industry, that advances the nation''s technology infrastructure and helps U.S. companies continually improve products and services; * the Hollings Manufacturing Extension Partnership, a nationwide network of local centers offering technical and business assistance to smaller manufacturers to help them create and retain jobs, increase profits, and save time and money; and * the Baldrige Performance Excellence Program, which promotes performance excellence among U.S. manufacturers, service companies, educational institutions, health care providers, and nonprofit organizations; conducts outreach programs; and manages the annual Malcolm Baldrige National Quality Award which recognizes performance excellence and quality achievement; * From 2007 to 2011, NIST provided cost-shared grants through the Technology Innovation Program, and between 1990 and 2007, it managed the Advanced Technology Program. NIST measurements support the smallest of technologiesnanoscale devices so tiny that tens of thousands can fit on the end of a single human hairto the largest and most complex of human-made creations, from earthquake-resistant skyscrapers to wide-body jetliners to global communication networks. We invite you to explore our web site to learn about our current projects, to find out how you can work with us, or to make use of our products and services. From the smart electric power grid and electronic health records to atomic clocks, advanced nanomaterials, and computer chips, innumerable products and services rely in some way on technology, measurement, and standards provided by the National Institute of Standards and Technology. NIST funds industrial and academic research in a variety of ways. The Small Business Innovation Research Program funds R&D proposals from small businesses. We also offer other grants to encourage work in specific fields: precision measurement, fire research, and materials science. Grants/awards supporting research at industry, academic, and other institutions are available on a competitive basis through several different Institute offices. For general information on NIST grants programs, please contact Christopher Hunton at [email protected] and (301) 975-5718. |
is related to: Creatinine Standardization Program has parent organization: U.S. Department of Commerce is parent organization of: Human Mitochondrial Protein Database is parent organization of: NIST Standard Reference Data is parent organization of: STRBase is parent organization of: HMDB |
nlx_144073 | SCR_006440 | National Institute of Standards and Technology | 2026-08-11 09:41:20 | 258 | |||||||||
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MoonProt Resource Report Resource Website 10+ mentions |
MoonProt (RRID:SCR_008803) | data or information resource, portal, laboratory portal, organization portal | The moonlighting protein database is not yet available publicly. Stay tuned. Moonlighting proteins have multiple, seemingly unrelated functions not due to gene fusions or alternative splicing. Like PGI, which is a cytosolic enzyme and an extracellular cytokine, dozens of other proteins have been found to moonlight. Connie coined the term moonlighting proteins and has written several review articles that develop the idea of moonlighting proteins and describe additional moonlighting proteins from the literature, how they switch between functions, how they might have evolved, and how they might benefit the cell. She is currently writing two additional invited articles and planning computational studies of the sequences and structures of known moonlighting proteins. | protein, multifunctional protein, double functional protein, protein database | has parent organization: University of Illinois at Chicago; Illinois; USA | PMID:12902157 | nlx_144357 | SCR_008803 | Moonlighting proteins database | 2026-08-11 09:41:47 | 27 | ||||||||
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DFBIdb Resource Report Resource Website |
DFBIdb (RRID:SCR_009456) | DFBIdb | data management software, software resource, software application | A suite of tools for efficient management of neuroimaging project data. Specifically, DFBIdb was designed to allow users to quickly perform routine management tasks of sorting, archiving, exploring, exporting and organising raw data. DFBIdb was implemented as a collection of Python scripts that maintain a project-based, centralised database that is based on the XCEDE 2 data model. Project data is imported from a filesystem hierarchy of raw files, which is an often-used convention of imaging devices, using a single script that catalogues meta-data into a modified XCEDE 2 data model. During the import process data are reversibly anonymised, archived and compressed. The import script was designed to support multiple file formats and features an extensible framework that can be adapted to novel file formats. Graphical user interfaces are provided for data exploration. DFBIdb includes facilities to export, convert and organise customisable subsets of project data according to user-specified criteria. | magnetic resonance, neuroimaging, python, data management software, project management | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | PMID:20838938 | GNU General Public License | nlx_155602 | SCR_009456 | 2026-08-11 09:41:51 | 0 | |||||||
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CreZoo Resource Report Resource Website 1+ mentions |
CreZoo (RRID:SCR_008919) | CreZoo | biomaterial supply resource, organism supplier, material resource | Database of helpful set of CreERT2 driver lines expressing in various regions of the developing and adult zebrafish. The lines have been generated via the insertion of a mCherry-T2A-CreERT2 in a gene trap approach or by using promoter fragments driving CreERT2. You can search the list of all transgenic lines or single entries by insertions (gene) or expression patterns (anatomy/region). In most cases the CreERT2 expression profile using in situ hybridization at 24 hpf and 48 hpf is shown, but also additional information (e.g. mCherry or CreERT2 expression at adult stages, transactivation of a Cre-dependent reporter line) is displayed. Currently, not all insertions have been mapped to a genomic location but the database will be regularly updated adding newly generated insertions and mapping information. Your help in improving and broadening the database by giving your opinion or knowledge of expression patterns is highly appreciated. | cre, transgenic line, gene, cre line, expression pattern, expression profile, blood, blood progenitor, brain, neural tube, ear, eye, fin, heart, kidney, notochord, olfactory system, regenerating fin, somite, tailbud, ubiquitous, urogenital opening, adult zebrafish, creert2 insertion, creert2, development, developing zebrafish. image |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Dresden University of Technology; Saxony; Germany |
DFG BR 1746/3-1 | nlx_151615 | SCR_008919 | zebrafish CreZoo, CreZoo Database | 2026-08-11 09:41:47 | 1 | |||||||
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FBIRN Image Processing Scripts Resource Report Resource Website 1+ mentions |
FBIRN Image Processing Scripts (RRID:SCR_009471) | FIPS | data management software, software resource, software application | A FSL package for the comprehensive management of large-scale multi-site fMRI projects, including data storage, retrieval, calibration, analysis, multi-modal integration, and quality control. | analyze, csh/tcsh, database application, dicom, linux, macos, magnetic resonance, posix/unix-like, statistical operation, unix shell, web environment |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Function BIRN |
BIRN License, BSD License | nlx_155618 | SCR_009471 | FBIRN Image Processing Scripts (FIPS) | 2026-08-11 09:41:52 | 5 | |||||||
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Udall Center of Excellence in Parkinson's Disease Research Resource Report Resource Website |
Udall Center of Excellence in Parkinson's Disease Research (RRID:SCR_008778) | data or information resource, topical portal, portal, disease-related portal | A research program associated with bringing together researchers from various disciplines to study the genetic and molecular basis of Parkinson's disease. The program focuses on epidemiological and longitudinal studies of Parkinson's disease, dementia with Lewy bodies, and aging and dementia. It also provides clinical materials for other research projects. This program provides faculty research funds, invited speaker seminar series, sponsorship of movement disorder fellowships, pilot research grants, and support for faculty travel to promote intra-institutional collaborations. | parkinson's disease, genetics, dementia, aging, research funding, pilot research, movement disorders, funding resource | has parent organization: Mayo Clinic Florida; Florida; USA | Parkinson's Disease | nlx_144145 | SCR_008778 | Center of Excellence in Parkinson's Disease Research, Mayo Parkinson's Disease Center of Excellence | 2026-08-11 09:41:45 | 0 | ||||||||
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Clinical Outcomes Research Initiative Resource Report Resource Website 1+ mentions |
Clinical Outcomes Research Initiative (RRID:SCR_009010) | CORI | service resource, data or information resource, database, resource, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on December 5, 2022. Endoscopic Reporting Software, aggregated and individual research data and tailor-made services aimed to advance the overall practice of endoscopy. It was developed to study outcomes of gastrointestinal (GI) endoscopic procedures in real life settings, using data obtained from the CORI Endoscopic Reporting Software or from other endoscopic reporting software. Practice sites include hospitals, ambulatory care centers, private practices, universities, and Veteran''''s hospitals (VA''''s). The CORI v4 Endoscopic Reporting Software is a specialty Electronic Health Record used to document endoscopic procedures and provide reporting services to your practice. Data from participating providers is also sent to a central data repository to become part of the National Endoscopic Database (NED), which now contains data from over 2.7 million GI procedures. The CORI v4 Endoscopic Reporting Software offers significant benefits for participating practices, providers and patients, as well as for everyone who benefits from CORI''''s research efforts. You may actively participate in research with CORI. If you have ideas for research using the NED, their research team can help you evaluate those ideas, collect and analyze the data. In addition, you may choose to participate in one of the prospective research projects conducted by CORI research staff. | clinical, endoscopy, gastroenterology, gastrointestinal, endoscopic, endoscopy reporting software, outcome, report, electronic health record, aggregator |
is listed by: NIDDK Information Network (dkNET) is listed by: NIDDK Research Resources has parent organization: Oregon Health and Science University; Oregon; USA |
NIDDK | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_152692 | SCR_009010 | 2026-08-11 09:41:48 | 6 | |||||||
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MUSC Health Podcast Library Resource Report Resource Website |
MUSC Health Podcast Library (RRID:SCR_008827) | MUSC Health Podcast Library, MUSC Podcast | data or information resource, podcast, narrative resource | The MUSChealth.com Podcast Library, featuring podcasts on a variety of topics related to your health and our services here at MUSC. These medical podcasts are hosted by MUSC faculty, physicians and special guests and are produced and directed by Linda Austin, M.D. Current topics include: * Academics and Education * Aging, Geriatrics and Caregiving * Alcohol and Drug Dependency * Allergies and Asthma * Ashley River Tower * Bones, Joints, Muscles and Spine * Cancer * Children''s Health * Cosmetic Surgery * Dental * Dermatology/Skin Problems * Diabetes, Endocrinology and Metabolism * Digestive Health * ENT: Ear, Nose and Throat * Executive Health * Eye Health * General Health and Wellness * Heart and Vascular Health * Hospice * Kohl''s Take a Minute for Kids * Lungs and Breathing * Men''s Health * Mental Health * MUSC News and Events * Neurological Health * Organ Transplant * Osteoporosis * Pregnancy - Week by Week * Pregnancy and Childbirth * Radiology * Research and Clinical Trials * SC Health, Leadership and Policy * Sports Medicine * Stroke * Urology * Weight Loss Surgery Follow-up * Weight Management * Women''s Health | health, medical, academic, education, geriatrics, caregiving, alcohol addiction, drug dependency, allergy, asthma, bone, joint, muscle, spine, cancer, child, cosmetic surgery, tooth, dermatology, skin, diabetes, endocrinology, metabolism, digestive system, ear, nose, throat, eye, heart, vascular system, hospice, child, lung, breathing, man, mental health, neurology, organ transplant, osteoporosis, pregnancy, childbirth, radiology, research, clinical trial, leadership, policy, sports medicine, stroke, urology, weight loss, surgery, weight management, woman, human | has parent organization: Medical University of South Carolina; South Carolina; USA | Aging | nlx_144507 | SCR_008827 | MUSC Health Audio Podcasts, MUSChealth.com Podcast Library | 2026-08-11 09:41:46 | 0 | |||||||
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PRABI Resource Report Resource Website 50+ mentions |
PRABI (RRID:SCR_010522) | PRABI | portal, service resource, data or information resource, training resource, organization portal | The PRABI is the Rhone-Alpes Bioinformatics Center, a IBISA platform member of the RENABI (the French network of bioinformatic platforms). It gathers 11 research teams spread on 4 different sites. The PRABI has research, service and training activities in a large number of bioinformatics and biostatistics fields. |
is parent organization of: ProDom is parent organization of: PrabiG is parent organization of: ROSO |
CNRS ; INRIA ; Claude Bernard University Lyon 1; Lyon; France ; INRA ; Region Rhone-Alpes |
nlx_20320 | SCR_010522 | Rhone-Alpes Bioinformatics Center | 2026-08-11 09:42:10 | 50 | ||||||||
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Emory University Labs and Facilities Resource Report Resource Website |
Emory University Labs and Facilities (RRID:SCR_011031) | Emory Labs and Facilities, Emory Labs & Facilities | portal, service resource, data or information resource, core facility, access service resource | THIS RESOURCE IS NO LONGER IN SERVICE,documented on February 3rd,2022. |
is listed by: ScienceExchange has parent organization: Emory University; Georgia; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_962 | SCR_011031 | Emory University Labs & Facilities | 2026-08-11 09:42:10 | 0 | ||||||||
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Rutgers University Labs and Facilities Resource Report Resource Website |
Rutgers University Labs and Facilities (RRID:SCR_010990) | Rutgers Labs and Facilities, Rutgers Labs & Facilities | portal, service resource, data or information resource, core facility, access service resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on February 3rd, 2022. |
is listed by: ScienceExchange is related to: Rutgers Waksman Institute of Microbiology Labs and Facilities has parent organization: Rutgers University; New Jersey; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_9105 | SCR_010990 | Rutgers University Labs & Facilities | 2026-08-11 09:42:19 | 0 | ||||||||
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Iowa State University Labs and Facilities Resource Report Resource Website |
Iowa State University Labs and Facilities (RRID:SCR_011052) | ISU Labs and Facilities, ISU Labs & Facilities | portal, service resource, data or information resource, core facility, access service resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on February 3rd, 2022. |
is listed by: ScienceExchange is related to: Iowa State University SIPERG Stable Isotope Lab Core Facility has parent organization: Iowa State University; Iowa; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_978 | SCR_011052 | Iowa State University Labs & Facilities | 2026-08-11 09:42:20 | 0 | ||||||||
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Prodigal Resource Report Resource Website 1000+ mentions |
Prodigal (RRID:SCR_011936) | Prodigal | simulation software, software resource, software application | Software tool for protein coding gene prediction for prokaryotic genomes. |
is listed by: OMICtools is listed by: Debian is listed by: SoftCite has parent organization: Oak Ridge National Laboratory |
PMID:20211023 | Free, Available for download, Freely available | SCR_021246, OMICS_01493 | https://sources.debian.org/src/prodigal/ | http://prodigal.ornl.gov/ | SCR_011936 | , PROkaryotic DYnamic programming Gene-finding ALgorithm, Prokaryotic Dynamic Programming Genefinding Algorithm | 2026-08-11 09:42:18 | 3398 | |||||
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Duke University Labs and Facilities Resource Report Resource Website |
Duke University Labs and Facilities (RRID:SCR_012445) | Duke Labs and Facilities, Duke Labs & Facilities | portal, service resource, data or information resource, core facility, access service resource | An Portal, Core facility |
is listed by: ScienceExchange is related to: Duke Model System Genomics is related to: Duke IGSP Genome Sequencing and Analysis Core is related to: Duke Neurotransgenic Laboratory is related to: Duke DNA Microarray Core Facility has parent organization: Duke University; North Carolina; USA |
SciEx_1393 | SCR_012445 | Duke University Labs & Facilities | 2026-08-11 09:42:26 | 0 |
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