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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
NIDDK Central Repository
 
Resource Report
Resource Website
50+ mentions
NIDDK Central Repository (RRID:SCR_006542) CDR, NIDDKCDR biospecimen repository, data or information resource, data repository, database, material storage repository, service resource, storage service resource NIDDK Central Repositories are two separate contract funded components that work together to store data and samples from significant, NIDDK funded studies. First component is Biorepository that gathers, stores, and distributes biological samples from studies. Biorepository works with investigators in new and ongoing studies as realtime storage facility for archival samples.Second component is Data Repository that gathers, stores and distributes incremental or finished datasets from NIDDK funded studies Data Repository helps active data coordinating centers prepare databases and incremental datasets for archiving and for carrying out restricted queries of stored databases. Data Repository serves as Data Coordinating Center and website manager for NIDDK Central Repositories website. clinical supply resource, data, clinical, sample sharing, genotyping, genotype, phenotype, genetic analysis, data sharing, genetics, serum, plasma, stool, urine, dna, red blood cell, buffy coat, tissue, immortalized cell line, cell line, data set, digestive organ, kidney, diabetes, kidney disease, digestive disease, genome-wide association study, sequencing, FASEB list uses: DataCite
is used by: NIDDK Information Network (dkNET)
is used by: NIF Data Federation
is used by: NIH Heal Project
is recommended by: National Library of Medicine
is recommended by: NIDDK Information Network (dkNET)
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
lists: HEALTHY study
lists: Nonalcoholic Steatohepatitis Clinical Research Network
lists: HALT-C Trial
lists: Type 1 Diabetes Genetics Consortium
lists: TEDDY
lists: Type 1 Diabetes TrialNet
lists: Rare and Atypical Diabetes Network
lists: Diabetes Prevention Program
lists: Diabetes Prevention Program Outcomes Study
lists: Restoring Insulin Secretion Consortium (RISE)
lists: Epidemiology of Diabetes Interventions and Complications
lists: Diabetes Control and Complications Trial
lists: Treatment Options for type 2 Diabetes in Adolescents and Youth
is listed by: One Mind Biospecimen Bank Listing
is listed by: re3data.org
is listed by: Biospecimens/Biorepositories: Rare Disease-HUB (RD-HUB)
is listed by: NIDDK Information Network (dkNET)
is related to: NCBI database of Genotypes and Phenotypes (dbGap)
is related to: Peginterferon and Ribavirin for Pediatric Patients with Chronic Hepatitis C
is related to: Chronic Renal Insufficiency Cohort Study
has parent organization: RTI International
NIDDK PMID:23396299
PMID:21959867
PMID:16595012
Restricted nlx_152673, r3d100010377 https://doi.org/10.17616/R3WP48 https://www.niddkrepository.org, SCR_006542 SciCrunch Registry NIDDK Central Repository, National Institute of Diabetes and Digestive and Kidney Diseases Central Repository, NIDDKCentral Repositories 2026-10-31 12:14:31 92
Dryad Digital Repository
 
Resource Report
Resource Website
1000+ mentions
Dryad Digital Repository (RRID:SCR_005910) data or information resource, data repository, database, service resource, storage service resource International, curated, digital repository that makes the data underlying scientific publications discoverable, freely reusable, and citable. Particularly data for which no specialized repository exists. Provides the infrastructure for, and promotes the re-use of, data underlying the scholarly literature. Governed by a nonprofit membership organization. Membership is open to any stakeholder organization, including but not limited to journals, scientific societies, publishers, research institutions, libraries, and funding organizations. Most data are associated with peer-reviewed articles, although data associated with non-peer reviewed publications from reputable academic sources, such as dissertations, are also accepted. Used to validate published findings, explore new analysis methodologies, repurpose data for research questions unanticipated by the original authors, and perform synthetic studies.UC system is member organization of Dryad general subject data repository. international, digital, repository, curated, data, collection, scientific, medical, publication, dataset, FASEB list is used by: NIH Heal Project
is recommended by: NIDDK Information Network (dkNET)
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
is listed by: CINERGI
is listed by: re3data.org
is listed by: Connected Researchers
is listed by: DataCite
is listed by: FAIRsharing
is related to: ImpactStory
is related to: Connected Researchers
has parent organization: NESCent - National Evolutionary Synthesis Center
has parent organization: University of North Carolina at Chapel Hill; North Carolina; USA
has parent organization: University of California; California; USA
European Commission ;
Institute for Museum and Library Services ;
JISC ;
NSF
DOI:10.25504/FAIRsharing.wkggtx, DOI:10.5061, r3d100000044, DOI:10.15146, DOI:10.17616/R34S33, nlx_149486 https://doi.org/10.17616/R34S33, https://doi.org/10.5061/, https://doi.org/10.15146, https://dx.doi.org/10.5061/, https://dx.doi.org/10.15146, https://fairsharing.org/10.25504/FAIRsharing.wkggtx, https://api.datacite.org/dois?prefix=10.18736, https://api.datacite.org/dois?prefix=10.6076, , https://doi.org/10.17616/R34S33 http://www.datadryad.org/ SCR_005910 SciCrunch Registry , The Dryad Digital Repository, Dryad Digital Repository, Dryad 2026-10-31 12:14:17 2790
Accelerated Cure Project MS Repository
 
Resource Report
Resource Website
Accelerated Cure Project MS Repository (RRID:SCR_004208) biomaterial supply resource, material resource A repository of biological samples and data from people with multiple sclerosis, selected other demyelinating diseases, and unaffected controls. The repository not only provides much-needed samples and data to researchers studying MS and other diseases, but also aggregates the results from all of these studies so that they can be analyzed collectively, leading to new findings and breakthroughs. The repository collects blood, DNA, and imaging once per year. The repository currently includes samples and data from over 2,700 subjects with Multiple Sclerosis, Neuromyelitis Optica, Acute Disseminated Encephalomyelitis, Transverse Myelitis, Optic Neuritis, and Clinically Isolated Syndromes, as well as controls. Blood samples are provided as aliquots as serum, plasma, DNA, RNA, and lymphocytes and each sample is accompanied by more than 40 pages of clinical and epidemiological data contributed by the subject and the enrolling neurologist. multiple sclerosis, blood, dna, image, demyelinating disease, control, transverse myelitis, neuromyelitis optica, acute disseminated encephalomyelitis, optic neuritis, clinical data, epidemiological data, clinical, longitudinal lists: Biospecimens/Biorepositories: Rare Disease-HUB (RD-HUB)
is listed by: One Mind Biospecimen Bank Listing
is listed by: Multiple Sclerosis Discovery Forum
is related to: Multiple Sclerosis Discovery Forum
has parent organization: Accelerated Cure Project for Multiple Sclerosis
Multiple Sclerosis, Demyelinating disease, Normal control, Transverse Myelitis, Neuromyelitis Optica, Acute Disseminated Encephalomyelitis, Optic Neuritis Public: Samples and data are available to any researcher at any institution anywhere in the world, Those requesting samples and/or data must commit to contribute their results at a future date back into the repository nlx_22946 http://www.acceleratedcure.org/repository/index.php SCR_004208 SciCrunch Registry Accelerated Cure Project Repository, Multiple Sclerosis (MS) Repository, ACP Repository 2026-10-31 12:21:07 0
SICAS Medical Image Repository
 
Resource Report
Resource Website
1+ mentions
SICAS Medical Image Repository (RRID:SCR_017420) data repository, service resource, storage service resource Medical image repository to store medical research data. Medical, image, repository, store, data is recommended by: NIDDK Information Network (dkNET)
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
Free, Freely available r3d100011560 https://doi.org/10.17616/R3HP8C SCR_017420 SciCrunch Registry Medical Image Repository, SICAS, SICAS Medical Image Repository 2026-10-31 12:16:52 5
linked life data - a semantic data integration platform for the biomedical domain
 
Resource Report
Resource Website
10+ mentions
linked life data - a semantic data integration platform for the biomedical domain (RRID:SCR_010642) data or information resource, database A platform for semantic data integration through RDF warehousing and efficient reasoning that helps to resolve conflicts in the data. Search and explore over 5 billion RDF statements from various sources including UniProt, PubMed, EntrezGene and 20 more... Perform complex SPARQL queries and retrieve more than one billion RDF resources. One of the major problems that biotechnology and pharmaceutical industries face today is how to combine data from multiple sources and make their research more productive. Data integration takes much time and often leads to errors and redundancies that require more time and resources to resolve. LinkedLifeData is a data warehouse that syndicates tons of heterogeneous biomedical knowledge in a common data model. The platform uses an extension of the RDF model that is able to track the provenance of each individual fact in the repository and thus update the information. Data Sources include: Disease Ontology, LinkedCT, Reactome, HPRD, DBPedia, UniProt, CellMap, NCBI Entrez-Gene, UMLS, IMID, MINT, DrugBank, LHGDN, Gene Ontology, HumanCYC, PubMed, NCI Nature, Human Phenotype Ontology, BioGRID, IntAct, HapMap, Symptom Ontology, DailyMed, ChEBI, Diseasome, Freebase, SIDER sparql, semantic web, rdf, triple store, biomedical, linked data is listed by: 3DVC
is related to: Literature-derived human gene-disease network
European Union FP 7 IST project LarKC FP7-215535 nlx_63945 SCR_010642 SciCrunch Registry LinkedLifeData, Linked Life Data 2026-10-31 12:20:35 13
Knockout Mouse Project Repository at JAX
 
Resource Report
Resource Website
Knockout Mouse Project Repository at JAX (RRID:SCR_017512) data or information resource Information from JAX about their contributions to KOMP project coordinated by International Mouse Phenotyping Consortium. National Institutes of Health has funded three KOMP2 centers in United States, including one at Jackson Laboratory, to work together on task of producing and phenotyping mice to establish resource of knockout mice and related database of gene function. KOMP, JAX, knockout, mice, data, gene, function, phenotype is related to: International Mouse Phenotyping Consortium (IMPC)
is related to: JAX Mice and Services
has parent organization: Knockout Mouse Project
Free, Freely available https://www.jax.org/mouse-search?searchTerm=repository SCR_017512 SciCrunch Registry 2026-10-31 12:16:52 0
Rutgers Cell and DNA Repository
 
Resource Report
Resource Website
10+ mentions
Rutgers Cell and DNA Repository (RRID:SCR_010624) RUCDR biomaterial supply resource, cell repository, material resource RUCDR is a biobank and a service organization that maintains human blood, serum, saliva, tissue and the genetic products derived from those. Services include technical consultation and logistical support for biobanking. Researchers can order biomaterials and apply for phenotypic / genotypic data. genetics, disease, phenotypic data, genotypic data, cell, dna, blood, cell line is listed by: One Mind Biospecimen Bank Listing
is related to: NIMH Repository and Genomics Resources
has parent organization: Rutgers University; New Jersey; USA
is parent organization of: NIMH Stem Cell Center
Researchers can order biomaterials and apply for phenotypic / genotypic data, Depending on the project. nlx_60990 SCR_010624 SciCrunch Registry Rutgers Cell DNA Repository, Rutgers University Cell DNA Repository 2026-10-31 12:19:15 37
International Society for Biological and Environmental Repositories
 
Resource Report
Resource Website
10+ mentions
International Society for Biological and Environmental Repositories (RRID:SCR_005383) ISBER data or information resource, organization portal, portal Global biobanking organization that creates opportunities for networking, education, and innovation. ISBER provides a community for harmonizing approaches to emerging challenges in repositories, as well as fostering ideas to create new solutions. biobanking organization, networking, education, innovation is listed by: Duke Human Heart Repository
has parent organization: American Society for Investigative Pathology
nlx_144519 SCR_005383 SciCrunch Registry ISBER - International Society for Biological and Environmental Repositories, International Society Biological Environmental Repositories, International Society for Biological and Environmental Repositories (ISBER) 2026-10-31 12:19:10 18
NEI-AREDS Genetic Repository
 
Resource Report
Resource Website
10+ mentions
NEI-AREDS Genetic Repository (RRID:SCR_004536) NEI-AREDS biomaterial supply resource, material resource The NEI-AREDS Genetic Repository is a collection of genetic material submitted by participants in the Age-Related Eye Disease Study (AREDS) which was sponsored by the National Eye Institute (NEI). The Repository stores DNA for use by investigators conducting genetics research into the causes of eye disease. The Age-Related Eye Disease Study was designed to learn about macular degeneration and cataract, two leading causes of vision loss in older adults. The study looked at how these two diseases progress and what their causes may be. In addition, the study tested certain vitamins and minerals to find out if they can help to prevent or slow these diseases. Participants in the study did not have to have either disease. (Enrollment was completed in January 1998.) Eleven medical centers in the United States took part in the study, and more than 4,700 people across the country were enrolled in AREDS. The study was supported by the National Eye Institute, part of the Federal government''s National Institutes of Health. The clinical trial portion of the study also received support from Bausch & Lomb Pharmaceuticals and was completed in October 2001. Data from AREDS is publicly available in the Database of Genotypes and Phenotypes (dbGaP). Genetic samples from 600 AREDS participants (200 controls, 200 Neovascular AMD cases, and 200 Geographic Atrophy cases) were selected using data available in March 2005 and then were genotyped using the Illumina 100K and the Affymetrix 100K gene chips. These genotype data are available in the dbGaP. DNA samples are distributed only to qualified professional persons who are associated with recognized research, medical, educational, or industrial organizations engaged in health-related research or health delivery. All orders for DNA samples must be submitted using the online catalog. vision loss, late adult human, macular degeneration, cataract, control, dna, clinical data, genotype data, frozen, age-related macular degeneration, eye disease is listed by: One Mind Biospecimen Bank Listing
has parent organization: Coriell Cell Repositories
Macular degeneration, Cataract, Control, Age-related macular degeneration NEI Public: DNA samples are distributed only to qualified professional persons who are associated with recognized research, Medical, Educational, Or industrial organizations engaged in health-related research or health delivery. nlx_143809 SCR_004536 SciCrunch Registry Age-Related Eye Disease Study, NEI Age-Related Eye Disease Study Genetic Repository, NEI-AREDS Repository, NEI Age-Related Eye Disease Study 2026-10-31 12:21:05 12
NIF Data Federation
 
Resource Report
Resource Website
10+ mentions
NIF Data Federation (RRID:SCR_004834) Data Federation data or information resource, portal, service resource Service that partners with the community to expose and simultaneously drill down into individual databases and data sets and return relevant content. This type of content, part of the so called hidden Web, is typically not indexed by existing web search engines. Every record links back to the originating site. In order for NIF to directly query these independently maintained databases and datasets, database providers must register their database or dataset with the NIF Data Federation and specify permissions. Databases are concept mapped for ease of sharing and to allow better understanding of the results. Learn more about registering your resource, http://neuinfo.org/nif_components/disco/interoperation.shtm Search results are displayed under the Data Federation tab and are categorized by data type and nervous system level. In this way, users can easily step through the content of multiple resources, all from the same interface. Each federated resource individually displays their query results with links back to the relevant datasets within the host resource. This allows users to take advantage of additional views on the data and tools that are available through the host database. The NIF site provides tutorials for each resource, indicated by the Professor Icon professor icon showing users how to navigate the results page once directed there through the NIF. Additionally, query results may be exported as an Excel document. Note: NIF is not responsible for the availability or content of these external sites, nor does NIF endorse, warrant or guarantee the products, services or information described or offered at these external sites. Integrated Databases: Theses virtual databases created by NIF and other partners combine related data indexed from multiple databases and combine them into one view for easier browsing. * Integrated Animal View * Integrated Brain Gene Expression View * Integrated Disease View * Integrated Nervous System Connectivity View * Integrated Podcasts View * Integrated Software View * Integrated Video View * Integrated Jobs * Integrated Blogs For a listing of the Federated Databases see, http://neuinfo.org/mynif/databaseList.php or refer to the Resources Listed by NIF Data Federation table below. semantics, neuroscience, animal, annotation, antibody, biospecimen, brain activation foci, clinical trial, connectivity, dataset, disease, drug, grant, image, microarray, model, multimedia, negative data, pathway, people, plasmid, registry, software, brain region, cell, gene, molecule, multi-level, nervous system, nervous system function, model uses: MNI Podcasts
uses: Educational Resources in Neuroscience
uses: Mind Hacks
uses: BAMS Nested Regions
uses: Indeed
uses: NINDS Disorder Index
uses: Drug Design Data Resource
uses: PubMed Health
uses: This Week In Science
uses: Science Talk
uses: BAMS Connectivity
uses: Lady Scientist
uses: Psychology Corner
uses: Wired Science
uses: CENtral Science
uses: RetractionWatch.com
uses: The Guardian: Science Weekly
uses: H2SO4Hurts
uses: 60-Second Mind
uses: PLoS Blogs
uses: Clarity resources
uses: Open Source Brain
uses: Diabetic Complications Consortium
uses: Integrated Animals
uses: Kawasaki Disease Dataset
uses: EEGbase
uses: Integrated Models
uses: Lifespan Observations Database
uses: NIF Web Services
uses: NIF Blog
uses: ATCC
uses: Cerebellar Platform
uses: Brain Machine Interface Platform
uses: Rafael Yustes Laboratory
uses: ASAP
uses: NIH VideoCasting
uses: NIDA Data Share
uses: Neurofed
uses: Candida Genome Database
uses: Addgene
uses: ASPGD
uses: Glomerular Activity Response Archive
uses: WikiPathways
uses: AmiGO
uses: NeuroMorpho.Org
uses: Cell Centered Database
uses: Integrated
uses: Community Structure-Activity Resource
uses: ClinicalTrials.gov
uses: Ensembl
uses: GeneNetwork
uses: Avian Brain Circuitry Database
uses: EcoCyc
uses: Entrez Gene
uses: Zebrafish Information Network (ZFIN)
uses: Arredondo ANT fNIRS dataset1
uses: Grants.gov
uses: T3DB
uses: Simtk.org
uses: PharmGKB
uses: DrugBank
uses: Aging Genes and Interventions Database
uses: Gene Expression Nervous System Atlas
uses: SumsDB
uses: bioDBcore
uses: BioNumbers
uses: Gene Ontology
uses: Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat
uses: Gramene
uses: Retina Project
uses: HomoloGene
uses: ArrayExpress
uses: Journal of Visualized Experiments
uses: Allen Mouse Brain Reference Atlas
uses: Gene Weaver
uses: Visiome Platform
uses: Developmental Therapeutics Program
uses: NeuroMab
uses: WormBase
uses: NeuronDB
uses: Integrated Grants
uses: studyforrest.org
uses: BrainInfo
uses: Mouse Phenome Database (MPD)
uses: NCBI Taxonomy
uses: NCBI Protein Database
uses: Psychoactive Drug Screening Program Ki Database
uses: Nuclear Receptor Signaling Atlas
uses: Brede Database
uses: NeuroImaging Tools and Resources Collaboratory (NITRC)
uses: Mouse Genome Informatics Transgenes
uses: Reactome
uses: Cell Image Library (CIL)
uses: BAMS Cells
uses: Synapse Web
uses: Integrated Videos
uses: NeuroVault
uses: Royal College of Psychiatrists Podcasts
uses: WU-Minn HCP 500 Subjects MR and MEG Release
uses: Data.gov Science and Research Data Catalog
uses: NITRC-IR
uses: One Mind Biospecimen Bank Listing
uses: Integrated Brain Gene Expression
uses: BrainSpan
uses: All In The Mind
uses: Scientific American Cross-Check
uses: PubChem
uses: NeuroPod
uses: BrainSpan
uses: Health.Data.gov
uses: Biointeractive
uses: UniProtKB
uses: Gray Matters
uses: dkCOIN
uses: Brain Science Podcast
uses: NIGMS Human Genetic Cell Repository
uses: DISCO
uses: GeneDB Lmajor
uses: TAIR
uses: ScienceNOW
uses: Daily Scan
uses: SGD
uses: Integrated Software
uses: BrainPod
uses: GeneDB Tbrucei
uses: MPO
uses: PANTHER
uses: Neurology Podcast
uses: Integrated Disease
uses: VMD
uses: UCSF Laboratory for Visual Neuroscience
uses: NIMH Chemical Synthesis and Drug Supply Program
uses: NIH Neuroscience Microarray Consortium
uses: SGN
uses: Protocol Online - Your labs reference book
uses: Integrated Podcasts
uses: OpenNeuro
uses: National Academy of Sciences Podcasts
uses: Beta Cell Biology Consortium
uses: Naturejobs
uses: Scientific American Guest Blog
uses: jobs.ac.uk
uses: New Scientist Jobs
uses: Science Careers
uses: Access-ScienceJobs.co.uk
uses: ScienceBlogs: Life Science
uses: ScienceBlogs: Brain and Behavior
uses: TheScienceJobs.com
uses: Nature Network Blogs
uses: The Guardian: Science
uses: LabSpaces
uses: ScienceBlogs: Medicine and Health
uses: Scientific American Observations
uses: Scientific American Bering in Mind
uses: QUEST
uses: Daring Nucleic Adventures - genegeek
uses: Oxford Science Blog
uses: Sciblogs
uses: New York Times - Well
uses: SciLogs
uses: Cassandras Tears
uses: BioPortfolio
uses: Now at NEJM
uses: 1000 Functional Connectomes Project
uses: Integrated Jobs
uses: Integrated Blogs
uses: JCVI CMR
uses: SciCrunch Registry
uses: Neuroskeptic
uses: CRCNS
uses: Expression Atlas of the Marmoset
uses: IXI dataset
uses: Integrated Auto-Extracted Annotation
uses: EU Clinical Trials Register
uses: Integrated Clinical Trials
uses: Human Brain Atlas
uses: goCognitive
uses: Law and Neuroscience
uses: International Mouse Phenotyping Consortium (IMPC)
uses: ClinVar
uses: Integrated Gene-Disease Interaction
uses: XNAT Central
uses: neuroelectro
uses: Integrated Nervous System Connectivity
uses: Antibody Registry
uses: OMIA - Online Mendelian Inheritance in Animals
uses: OMIM
uses: Science Podcast
uses: Mouse Genome Informatics (MGI)
uses: Monster
uses: NCBI
uses: Wired Science Blogs
uses: F1000 Posters
uses: Neurophilosophy
uses: Comparative Toxicogenomics Database (CTD)
uses: FlyBase
uses: GeneReviews
uses: GeneDB Pfalciparum
uses: Naturally Selected
uses: PomBase
uses: Pseudomonas Genome Database
uses: The Guardian: Science Videos
uses: Orphanet
uses: Dictyostelium discoideum genome database
uses: PeptideAtlas
uses: NeuroSynth
uses: neuropathology blog
uses: Genomes Unzipped
uses: National Institutes of Health Research Portfolio Online Reporting Tool
uses: BrainMaps.org
uses: It Takes 30
uses: Gait in Parkinson's Disease
uses: Physiobank
uses: Gait Dynamics in Neuro-Degenerative Disease Data Base
uses: American Journal of Psychiatry Podcasts
uses: Neurodatabase.org
uses: Brain Architecture Management System
uses: RanchoBiosciences
uses: ModelDB
uses: CoCoMac
uses: Olfactory Bulb Odor Map DataBase (OdorMapDB)
uses: Gene Expression Omnibus
uses: Caenorhabditis Genetics Center
uses: Labome
uses: Open Access Series of Imaging Studies
uses: Biological General Repository for Interaction Datasets (BioGRID)
uses: Olfactory Receptor DataBase
uses: T1DBase
uses: Gemma
uses: CellML Model Repository
uses: ResearchCrossroads
uses: Biocompare
uses: BioNOT
uses: Hays
uses: Research Blogging
uses: Discover Magazine
uses: PolygenicBlog
uses: Kawasaki Disease Dataset2
uses: Allen Mouse Brain Connectivity Atlas
uses: Integrated Manually Extracted Annotation
uses: Roadmap Epigenomics Project
uses: Integrated Cell Lines
uses: National Mouse Metabolic Phenotyping Centers
uses: Mendelspod
uses: Integrated Snippets
uses: Integrated Datasets
uses: Nature Podcast
uses: GWAS: Catalog of Published Genome-Wide Association Studies
uses: KEGG
uses: USC Multimodal Connectivity Database
uses: Inside NIA: A Blog for Researchers
uses: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
uses: NIF Registry Automated Crawl Data
uses: Genetic Analysis Software
uses: anage
uses: Intestinal Stem Cell Consortium
uses: Animal QTLdb
uses: elements of morphology
uses: Human Life-Table Database
uses: Clinical Genomic Database
uses: NIDDK Central Repository
uses: MONARCH Initiative
uses: Human Phenotype Ontology
is used by: SciCrunch
is used by: NIDDK Information Network (dkNET)
lists: AutDB
lists: Drug Related Gene Database
lists: Gene Ontology Tools
lists: CHEBI
is listed by: 3DVC
is related to: International Mouse Strain Resource
is related to: Internet Brain Volume Database
is related to: Resource Identification Portal
is related to: Rat Genome Database (RGD)
is related to: VISTA Enhancer Browser
is related to: NIH Human Pluripotent Stem Cell Registry
is related to: Zebrafish International Resource Center
is related to: Bloomington Drosophila Stock Center
is related to: Journal of Comparative Neurology Antibody database
has parent organization: Neuroscience Information Framework
NIDA ;
NIH Blueprint for Neuroscience Research ;
U.S. Department of Health and Human Services HHSN27120080035C
Refer to individual databases nlx_81822 http://neuinfo.org/nif/nifgwt.html?query=* SCR_004834 SciCrunch Registry Neuroscience Information Framework Data Federation 2026-10-31 12:19:09 28
Fox Chase Biosample Repository Core Facility
 
Resource Report
Resource Website
Fox Chase Biosample Repository Core Facility (RRID:SCR_004746) FCCC BRCF biomaterial supply resource, material resource, tissue bank Fox Chase has developed a facility dedicated to the collection and distribution of human subject biosamples and supporting personal and family cancer history data. In response to announcement (CA-00-025; P30 CA06927S2), the Fox Chase Cancer Center''s Biosample Repository (BR) and Tumor Bank Facility (TBF) is making blood specimens (i.e., whole blood, plasma, platelet-rich plasma, platelet homogenates, red blood cells, leukocytes, lymphoblastoid cell lines, and DNA isolated from leukocytes) and tumor tissues (i.e., multi-tissue microarrays and tumor DNAs) collected by our facilities available for research. Request for blood and tissue will be reviewed by a panel of scientists and ranked. Priority will be given to those investigators with current NIGH/NCI funding, but will be made available as recommended by the internal and external advisory committees. * Blood Inventory: Plasma, Serum, Whole Blood, Lymphocytes, DNA * Tissue Inventory: Tumor and Normal Adjacent Tissue, Fresh-Frozen, Formalin-Fixed Paraffin-Embedded Tissue, OCT Embedded Tissue, Ethanol-fixed Tissue blood, whole blood, serum, lymphocyte, plasma, platelet-rich plasma, platelet homogenates, red blood cell, leukocyte, lymphoblastoid cell line, dna, tumor tissue, normal adjacent tissue, multi-tissue microarray, tumor dna, fresh-frozen, formalin-fixed paraffin-embedded, oct embedded, ethanol-fixed, cancer, control, tumor is listed by: One Mind Biospecimen Bank Listing
has parent organization: Fox Chase Cancer Center
Cancer, Control Public: In response to announcement (CA-00-025; P30 CA06927S2), The Fox Chase Cancer Center''s Biosample Repository (BR) and Tumor Bank Facility (TBF) is making blood specimens and tumor tissues collected by our facilities available for research. Priority will be given to those investigators with current NIGH/NCI funding, But will be made available as recommended by the internal and external advisory committees. nlx_75230 SCR_004746 SciCrunch Registry Fox Chase Cancer Center Biosample Repository Core Facility, Fox Chase BRCF, Fox Chase Cancer Center Biosample Repository, Fox Chase Tumor Bank, FCCC Biosample Repository Core Facility 2026-10-31 12:20:05 0
SEER-Linked Virtual Tissue Repository (VTR) Program
 
Resource Report
Resource Website
SEER-Linked Virtual Tissue Repository (VTR) Program (RRID:SCR_028494) SEER VTR biospecimen repository, data or information resource, material storage repository, service resource, storage service resource Program uses cancer surveillance infrastructure to provide researchers with access to tissue and data. SEER Program cancer registry provides researchers with de-identified, but linked, archival, formalin-fixed, paraffin-embedded (FFPE) tissue from clinical care and/or clinical data obtained from medical record abstraction for secondary use in cancer research. Researchers may also request de-identified demographic information, outcomes, pathology reports, custom clinical data collection, and/or digital whole slide images. Used for studying rare cancers, early onset cancers, multiple primary cancers, unusual cancer outcomes, and cancers in small populations. de-identified, archival, formalin-fixed, paraffin-embedded, tissue, clinical care, clinical data, medical record, cancer National Cancer Institute Extramural Research Program PMID:39102878 Free, Freely Available SCR_028494 SciCrunch Registry Epidemiology, and End Results (SEER) -Linked Virtual Tissue Repository (VTR) Program, SEER-Linked VTR Program, Surveillance, NCI SEER-Linked Virtual Tissue Repository 2026-10-31 12:25:01 0
NINDS Repository
 
Resource Report
Resource Website
1+ mentions
NINDS Repository (RRID:SCR_004520) biomaterial supply resource, material resource Open resource of biological samples (DNA, cell lines, and other biospecimens) and corresponding phenotypic data to promote neurological research. Samples from more than 34,000 unique individuals with cerebrovascular disease, dystonia, epilepsy, Huntington's Disease, motor neuron disease, Parkinsonism, and Tourette Syndrome, as well as controls (population control and unaffected relatives) have been collected. The mission of the NINDS Repository is to provide 1) genetics support for scientists investigating pathogenesis in the central and peripheral nervous systems through submissions and distribution; 2) information support for patients, families, and advocates concerned with the living-side of neurological disease and stroke. nervous system disorder, neurogenetics, genetic, clinical data, cerebrovascular disease, epilepsy, motor neuron disease, parkinson's disease, parkinsonism, tourette's disorder, normal control, stroke, amyotrophic lateral sclerosis, huntington's disease, dystonia, dementia, neurologically normal, blood, dna, biomarker, plasma, urine, cell line, induced pluripotent stem cell, fibroblast, stem cell, frozen, lymphoblast, biospecimen banking, biospecimen processing, biospecimen distribution, biospecimen, genetics, phenotype, neurological disease is listed by: One Mind Biospecimen Bank Listing
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is related to: PD-DOC
is related to: Parkinson’s Disease Biomarkers Program Data Management Resource (PDBP DMR)
has parent organization: Coriell Cell Repositories
Cerebrovascular disease, Epilepsy, Motor neuron disease, Parkinson's disease, Tourette's Disorder, Normal control, Stroke, Amyotrophic Lateral Sclerosis, Huntington's disease, Dystonia, Dementia, Neurologically normal, Neurological disorder NINDS ;
NIH Blueprint for Neuroscience Research
Public nlx_143800 SCR_004520 SciCrunch Registry NINDS Human Genetics DNA Cell Line Repository, NINDS Human Genetics DNA and Cell Line Repository, The NINDS Repository, The NINDS Human Genetics Resource Center, The NINDS Human Genetics DNA and Cell Line Repository 2026-10-31 12:21:08 3
NIMH Repository and Genomics Resources
 
Resource Report
Resource Website
50+ mentions
NIMH Repository and Genomics Resources (RRID:SCR_006698) NRGR, RGR institution Collaborative venture between the National Institute of Mental Health (NIMH) and several academic institutions. Repository facilitates psychiatric genetic research by providing patient and control samples and phenotypic data for wide-range of mental disorders and Stem Cells.Stores biosamples, genetic, pedigree and clinical data collected in designated NIMH-funded human subject studies. RGR database likewise links to other repositories holding data from same subjects, including dbGAP, GEO and NDAR. Allows to access these data and biospecimens (e.g., lymphoblastoid cell lines, induced pluripotent cell lines, fibroblasts) and further expand genetic and molecular characterization of patient populations with severe mental illness. biosamples, genetic, pedigree, clinical, data is listed by: One Mind Biospecimen Bank Listing
is related to: NIMH Stem Cell Center
is related to: Rutgers Cell and DNA Repository
is related to: Sequenced Treatment Alternatives to Relieve Depression Study
is related to: CATIE - Clinical Antipsychotic Trials in Intervention Effectiveness
is related to: Systematic Treatment Enhancement Program for Bipolar Disorder (STEP-BD)
is related to: NKI-RS Enhanced Sample
has parent organization: Rutgers University; New Jersey; USA
has parent organization: Washington University in St. Louis; Missouri; USA
has parent organization: University of Southern California; Los Angeles; USA
Bipolar Disorder, Schizophrenia, Alzheimer's disease, Autism, Attention deficit-hyperactivity disorder, Depression, Control, Obsessive-Compulsive Disorder, Anorexia Nervosa, Relative, Mental disorder, Brain disorder, Relative National Institute for Mental Health ;
NIH Blueprint for Neuroscience Research
Restricted grid.482687.7, nif-0000-00186, SCR_016318 https://ror.org/026dax180 SCR_006698 SciCrunch Registry NIMH: Center for Collaborative Genetic Studies, NIMH Human Genetics Initiative, NIMH Center for Genetic Studies, NIMH Genetics, Center for Collaborative Genomic Studies on Mental Disorders, NIMH Repository and Genomics Resources (NRGR) 2026-10-31 12:14:35 66
Research Tissue Repository - University of Connecticut
 
Resource Report
Resource Website
1+ mentions
Research Tissue Repository - University of Connecticut (RRID:SCR_004843) UConn Research Biorepository biomaterial supply resource, material resource, tissue bank The UConn Health Center Research Biorepository consists of de-identified tissue and/or blood samples and patient data obtained from consented patients coupled with a database of clinical and laboratory data. Identified samples are available to researchers with IRB approval. Our goal is to develop a comprehensive resource that will procure, characterize and distribute high quality human specimens according to rigid protocols and ethical guidelines. We are sponsored by the Carole and Ray Neag Comprehensive Cancer Center and work closely with clinical and basic science investigators concentrating on translational research. The Biorepository is one of the many core facilities that receives support from the Health Center Research Advisory Committee (HCRAC). Our services include consenting of eligible patients, coordination for specimen collection, storage, data management and specimen distribution. We offer H & E, unstained and frozen sections on slides as well as paraffin and OCT curls. RNA and DNA isolation from specimens are also available, using methods that preserve the integrity of the nucleic acids. Logged in investigators can browse the catalogue for a detailed description of our services and prices on the Research Store and see an inventory of our samples using the link on this page titled ����??Sample Inventory����??. The inventory is updated on a regular basis. is listed by: One Mind Biospecimen Bank Listing
has parent organization: University of Connecticut; Connecticut; USA
nlx_82584 SCR_004843 SciCrunch Registry Research Tissue Repository Core Facility, University of Connecticut Health Center Research Tissue Repository Core Facility, UConn Health Center Research Biorepository 2026-10-31 12:20:07 1
PXE International Registry and BioBank
 
Resource Report
Resource Website
PXE International Registry and BioBank (RRID:SCR_004668) PXE International BioBank and Clinical Data Registry biomaterial supply resource, material resource, tissue bank The PXE International BioBank and Clinical Data Registry is the centralized sample repository and registry for pseudoxanthoma elasticum (PXE). It enables translational research and treatment discovery. PXE International, Inc. holds the world''''s largest collection of blood and tissue from people affected by PXE and their families. It is the only centralized repository for PXE samples in the world. The PXE International BioBank has tens of thousands of samples, including DNA, tissue from every organ in the body, full body donations postmortem, and many special samples such as eyes, urine, breast tumor tissue and so on. The PXE International Clinical Data Registry ties the biological samples to the clinical record and stores self reported data (surveys and questionnaires), medical records (from any specialist), images (CT scans, MRIs and so on) and anything else that can be scanned or typed in. We are using these samples for genetic research ������?? examining the many mutations, the effect of the mutations on the cell and the future of possible interventions. PXE International established the PXE International Blood and Tissue Bank to make certain that your privacy and confidentiality are protected and your samples are available to any approved research project. Researchers interested in either donating PXE DNA, tissue and cell lines or in applying to use material from the bank should call 202.362.9599 or email Sharon Terry. is listed by: One Mind Biospecimen Bank Listing
is related to: Genetic Alliance Biobank
Pseudoxanthoma elasticum nlx_66505 http://www.pxe.org/English/view.asp?x=1548 SCR_004668 SciCrunch Registry PXE International Tissue Bank, PXE International Registry BioBank, PXE International Blood and Tissue Bank 2026-10-31 12:20:01 0
Open Clinical Report Repository
 
Resource Report
Resource Website
Open Clinical Report Repository (RRID:SCR_013585) data or information resource THIS RESOURCE IS NO LONGER IN SERVICE, documented on July 17, 2013. Repository of de-identified clinical reports available for NLP researchers has been designed. Work with the AMIA NLP working group in designing annotation schemas and obtaining annotations, design a repository for shareable annotations, help design and execute a shared task in IE from clinical reports. The University of Pittsburgh NLP Repository contains clinical reports that are available to the community for NLP research purposes and comprises: # Report Repository - one month of de-identified clinical reports from multiple hospitals and # Annotation Repository - annotations performed on reports from the Report Repository. Anyone performing annotations on reports from the NLP Repository is required to deposit their annotations. The Repository contains reports of the following types generated from multiple hospitals during a single month: * History and Physicals * Progress Notes * Consultation Reports * Radiology Reports * Surgical Pathology Reports * Emergency Department Reports * Discharge Summaries * Operative Reports * Cardiology Reports annotation, clinical, repository, report, de-identification, information extraction, natural language processing, clinical report is listed by: Biositemaps
has parent organization: University of Pittsburgh; Pennsylvania; USA
NIGMS ;
NIST
PMID:17317291 THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-33412 http://www.dbmi.pitt.edu/blulab/projects.asp#5 SCR_013585 SciCrunch Registry Open clinical report and annotation repository, Open Clinical Report Repository 2026-10-31 12:15:58 0
Polar Rock Repository
 
Resource Report
Resource Website
1+ mentions
Polar Rock Repository (RRID:SCR_002212) PRR data or information resource, database National facility for permanent curatorial preservation of rock collections from Antarctica and Southern Ocean. Repository preserves existing rock/dredge/unconsolidated/terrestrial core/photo archive collections for research use. Database allows online requests for sample loans. Mapping tool combines existing PRR database with high resolution satellite images of Antarctica, REMA or USGS topographic layers. PRR created Polar Rock Boxes for educators who are teaching about Earth science and Antarctica. Each Polar Rock Box contains samples with binder full of teaching information about Earth science and Antarctica. These boxes are freely available as short loans to US schools. Sampling in polar regions, rock, polar, antarctica, dredge, southern ocean, glacial sediment, volcano, metadata is listed by: CINERGI
has parent organization: Ohio State University; Ohio; USA
NSF Free, Freely available nlx_154740, r3d100011627 https://doi.org/10.17616/R3JD0W SCR_002212 SciCrunch Registry Polar Rock Repository Database, U.S. Polar Rock Repository 2026-10-31 12:18:25 1
British Columbia Tumour Tissue Repository
 
Resource Report
Resource Website
British Columbia Tumour Tissue Repository (RRID:SCR_004597) BCCA-TTR, TTR biomaterial supply resource, material resource, tissue bank A provincial biobank resource to support translational cancer research at the BC Cancer Agency, across Canada and internationally. This biobank collects biospecimens (tissues and blood), and clinical information and processes these to create anonymous cases that can be studied by cancer researchers to understand how cancer develops, how it grows, how it spreads, and how it responds to treatment. These tissues and data are obtained from patients who undergo surgery to treat a tumor and who have generously provided their consent for the TTR to collect tissues that are unused after diagnosis has been completed. The TTR is a provincial program that currently comprises a core biobank at the Vancouver Island Center, Victoria, that offers participation in the program to patients in Victoria and Nanaimo. The TTR works with other banks and expert translational research groups in BC, to create expanded capacity for collection and opportunities for research access to tissue resources. The TTR operates under the management and oversight of the director, a scientific advisory board, and the UBC BCCA Research Ethics Board. The TTR operates within organizational policies and a commitment to protection of donor privacy that is embodied in all standard operating procedures and aspects of the repository. The TTR is also a founding member and contributor to the development of provincial (BC BioLibrary) and national (CTRNet) initiatives to promote biobanking. blood, tissue, clinical information is listed by: One Mind Biospecimen Bank Listing
is related to: Canadian Tumour Repository Network
has parent organization: BC Cancer Agency
Cancer, Tumor BC Cancer Foundation nlx_58550 SCR_004597 SciCrunch Registry BC Cancer Agency Tumor Tissue Repository, BC Cancer Agency TTR, BCCA Tumour Tissue Repository, BC Cancer Agency Tumour Tissue Repository 2026-10-31 12:20:00 0
Brown Digital Repository
 
Resource Report
Resource Website
Brown Digital Repository (RRID:SCR_023144) data repository, service resource, storage service resource Collection contains open and publicly funded data sets created by Brown University faculty and student researchers. Increasingly, publishers, and funders are requiring that protocols, data sets, metadata, and code underlying published research be retained and preserved, their locations cited within publications, and shared with other researchers and the public. The deposits here endeavor to be in line with FAIR Principles (Findable, Accessible, Interoperable, Reusable). If you would like to deposit data set into this collection for the purposes of citation/linking within publication and public dissemination, then please log in, zip up and upload your file, and request digital object identifier (DOI) for your data citation. is listed by: DataCite
is listed by: re3data.org
Free, Freely available DOI:10.17616/R3193B, r3d100011654, DOI:10.7301 https://doi.org/10.7301, https://dx.doi.org/10.7301, http://doi.org/10.17616/R3193B, https://doi.org/10.17616/R3193B SCR_023144 SciCrunch Registry Brown Digital Repository 2026-10-31 12:18:47 0

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