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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Texas Human Biologics Resource Report Resource Website 1+ mentions |
Texas Human Biologics (RRID:SCR_010523) | biomaterial supply resource, material resource | Biotechnology company dedicated to enhancing quality of patient care through development and manufacture of safe, high quality allograft solutions for healthcare professionals. | works with: Bone Bank Allografts | nlx_20452 | SCR_010523 | 2026-09-19 12:58:07 | 6 | |||||||||||
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ANNOVAR Resource Report Resource Website 5000+ mentions |
ANNOVAR (RRID:SCR_012821) | ANNOVAR | software application, software resource | An efficient software tool to utilize update-to-date information to functionally annotate genetic variants detected from diverse genomes (including human genome hg18, hg19, as well as mouse, worm, fly, yeast and many others). Given a list of variants with chromosome, start position, end position, reference nucleotide and observed nucleotides, ANNOVAR can perform: 1. gene-based annotation. 2. region-based annotation. 3. filter-based annotation. 4. other functionalities. (entry from Genetic Analysis Software) | genomic analysis, imaging genomics, next generation sequencing, snp, gene, bio.tools |
is listed by: OMICtools is listed by: Genetic Analysis Software is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Debian is listed by: bio.tools is listed by: SoftCite is related to: wANNOVAR has parent organization: OpenBioinformatics.org |
PMID:20601685 | Free | nlx_154225, biotools:annovar, OMICS_00165 | https://bio.tools/annovar, https://bio.tools/annovar | SCR_012821 | functional ANNOtation of genetic VARiants, ANNOVAR: Functional annotation of genetic variants | 2026-09-19 12:58:08 | 6463 | |||||
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LifeGene Resource Report Resource Website 10+ mentions |
LifeGene (RRID:SCR_010524) | LifeGene | biomaterial supply resource, material resource | Swedish study to get a better understanding of how genes, environment and way of life affect health that will enable access to the longitudinal data on 500,000 participants after ethical approval. Half a million people in Sweden between the ages of 0 and 45 will be recruited as volunteers for 6 to 8 years. People between 18 and 45 will be invited and they may, in turn, bring children and other people that they live with into the project. Participants will be followed for many years with regular online surveys and health checks. Their blood and urine samples will also be stored in a biobank. All the data will form a very large information base, where researchers can follow what happens with people''''s health. The LifeGene test center will measure height, hip, waist and chest measurements. A so-called spirometry test will be conducted which measures lung function, a hearing test and bioimpedance measurement (includes weight, BMI and distribution of body fat and muscle mass). They also take blood and urine samples and measure blood pressure and pulse. LifeGene foresees a lot of different research cooperation. Everything from simple withdrawal of longitudinal data, leverage of LifeGene infrastructure and cooperation between LifeGene and complementing scientific projects covering specific areas in more depth. LifeGene will enable access to unique longitudinal data on 500,000 participants available for researchers after ethical approval. LifeGene is also an infrastructure with Test Centers covering most of Sweden, logistics for sample management from arm-to-freezer and state-of-the-art large scale automatic biobanking enabling low cost, high quality, fast withdrawal of biological samples. | environment, disease, gene, lifestyle, health, child, adult, longitudinal, genetic test, survey |
is listed by: One Mind Biospecimen Bank Listing is related to: University of Gothenburg; Gothenburg; Sweden is related to: Karolinska Institute; Stockholm; Sweden is related to: Lund University; Lund; Sweden is related to: Umea University; Umea; Sweden is related to: Uppsala University; Uppsala; Sweden is related to: Linkoping University; Linkoping; Sweden has parent organization: Karolinska Institute; Stockholm; Sweden |
General population, Volunteer | Swedish Research Council ; Karolinska Institutet; Stockholm; Sweden ; AFA Foundation ; Torsten Foundation ; Ragnar Soderberg Foundation |
With approval, Must have Swedish Institute connections | nlx_20757 | http://lifegene.ki.se/working_groups/sampling_en.html | SCR_010524 | 2026-09-19 12:58:08 | 30 | |||||
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Puget Sound Blood Center Resource Report Resource Website |
Puget Sound Blood Center (RRID:SCR_010527) | PSBC | biomaterial supply resource, material resource | At Puget Sound Blood Center, when we talk about the work of our Research Institute, what we are really talking about is saving lives. Many recognize the lifesaving work of the Blood Center for its role in maintaining the blood supply for Western Washington. But that is only the beginning of how the Blood Center touches the lives of people all over the world. The Blood Center is widely considered the premier knowledge source on blood research and transfusion medicine and has been developing cutting-edge technologies and establishing best practices in this field for over sixty-six years. Medical institutions worldwide rely on the Blood Center''s research work. Scientific equipment manufacturers, as well as pharmaceutical companies turn to the Blood Center for help in developing effective equipment and successful therapies that are saving lives around the world every day. |
is listed by: One Mind Biospecimen Bank Listing is parent organization of: Northwest Tissue Services |
nlx_24740 | SCR_010527 | 2026-09-19 12:58:08 | 0 | ||||||||||
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Oregon Brain Bank Resource Report Resource Website |
Oregon Brain Bank (RRID:SCR_013085) | biomaterial supply resource, material resource | Brain bank that harvests, banks and disperses postmortem tissue for use in brain and medical research. It also provides neuropathologic diagnoses of organic dementia in a cohort of NIH sponsored research subjects. The bank includes tissue primarily from patients with Alzheimer's but also includes Huntington's, Parkinson's, and other disorders. | neurodegenerative research, postmortem, tissue, neurodegenerative, neurodegenerative disease, alzheimer's disease, huntington's disease, parkinson's disease, amyotrophic lateral sclerosis, multiple sclerosis, control, tissue, brain tissue, left hemisphere, right hemisphere, white matter, deep gray structure, brainstem, cerebellum, spinal cord, late adult human, flash frozen, formalin-fixed, stained, brain bank, research, medical |
is listed by: One Mind Biospecimen Bank Listing is related to: Layton Center Clinical Data Resources has parent organization: Oregon Health and Science University; Oregon; USA |
Alzheimer's disease, Huntington's disease, Parkinson's disease, Amyotrophic Lateral Sclerosis, Multiple Sclerosis, Dementia, Neurodegenerative disease, Aging | According to established protocols, For use in neurodegenerative research | nlx_35532 | SCR_013085 | Oregon Brain Bank: Human tissue repository for neurodegenerative research studies | 2026-09-19 12:58:09 | 0 | |||||||
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National Psoriasis BioBank Resource Report Resource Website |
National Psoriasis BioBank (RRID:SCR_010537) | National Psoriasis BioBank | biomaterial supply resource, material resource | The National Psoriasis Victor Henschel BioBank is a collection of biological samples and clinical information used by qualified scientists to further the field of psoriasis genetics. Once completed, the National Psoriasis BioBank will be the largest collection of psoriasis DNA samples in the world, moving us closer to understanding the causes of psoriatic diseases, discovering more and better treatments and finding a cure. The BioBank is currently collecting DNA from people with and without psoriasis and/or psoriatic arthritis. Simply by donating your DNA����??a blood sample and a swab of your cheek cells����??and providing us with your medical history, you can help us find a cure. Samples will be processed and stored at a private laboratory and not at the National Psoriasis Foundation. The National Psoriasis BioBank is part of the Genetic Alliance BioBank (GA BioBank), a centralized repository for the collection, storage and distribution of biological samples (including DNA, serum, cells and tissues) and clinical data for genetic researchers. | psoriasis, normal, psoriatic arthritis, genetics, clinical data, dna, blood, cell, cheek cell |
is listed by: One Mind Biospecimen Bank Listing has parent organization: National Psoriasis Foundation has parent organization: Genetic Alliance Biobank |
Psoriasis, Normal, Psoriatic arthritis | Public: For qualified scientists to further the field of psoriasis genetics. | nlx_25849 | SCR_010537 | Victor Henschel BioBank, National Psoriasis Victor Henschel BioBank | 2026-09-19 12:58:08 | 0 | ||||||
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Movement Disorders Biobank Resource Report Resource Website |
Movement Disorders Biobank (RRID:SCR_010659) | MDBB | biomaterial supply resource, material resource | A biobank of human biological material and genetic information. It provides samples and information to researchers in order to identify new genes and clarify pathogenic mechanisms of diseases. The biobank offers biochemical and molecular diagnoses of genetic dystonias, Parkinson's disease and NBIA disorders, as well as storage of biological samples for external institutions. | dna, fibroblast, movement disorder, neurodegeneration, brain iron accumulation disorder, dystonia, parkinson's disease, phenotype, genotype, gene, biobank |
is listed by: One Mind Biospecimen Bank Listing is related to: EuroBioBank has parent organization: EuroBioBank |
Movement disorder, Neurodegeneration with Brain Iron Accumulation disorder, Dystonia, Parkinson's disease | nlx_69108 | http://www.istituto-besta.it/Area-Ricerca.aspx?doc=Elenco-Unita-Operative&IdUO=UO-NEUROGENETICAMOLECOLARE | SCR_010659 | 2026-09-19 12:58:08 | 0 | |||||||
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Brain Health Registry Resource Report Resource Website 10+ mentions |
Brain Health Registry (RRID:SCR_010230) | Brain Health Registry | patient registry, people resource | A website aimed at recruiting and assessing subjects for all types of neuroscience studies with the internet. The hope is to accelerate various types of observational studies and clinical trials, and also reduce costs. They are interested in having people, including healthy subjects of all ages, join the registry. Joining only takes a few minutes. The web-based project is designed to speed up cures for Alzheimer's, Parkinson's and other brain disorders. It uses online questionnaires and online neuropsychological tests (which are very much like online brain games). | questionnaire, brain test, brain, health, neuropsycholgoical test, game, clinical trial | has parent organization: University of California at San Francisco; California; USA | Alzheimer's disease, Parkinson's disease, Depressive Disorder, Traumatic brain injury, Brain disorder, Post-Traumatic Stress Disorder, Aging | Free, The community can contribute to this resource | nlx_156798 | SCR_010230 | 2026-09-19 12:58:07 | 14 | |||||||
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Maritime Brain Tissue Bank Resource Report Resource Website |
Maritime Brain Tissue Bank (RRID:SCR_013838) | MBTB | biomaterial supply resource, material resource | A biomaterial supply resource which supplies brain tissue for researchers studying dementia and other neurodegenerative diseases. The Maritime Brain Tissue Bank archives tissues related to Alzheimer's Disease, mixed dementias, Lewy Body Disease, and Huntington's Disease, among others. | biomaterial supply resource, brain, brain tissue, dementia, neurodegenerative disease |
is listed by: Multiple Sclerosis Discovery Forum is related to: Multiple Sclerosis Discovery Forum |
Alzheimer's Disease, Mixed Dementias, Vascular Dementia, Lewy Body Disease, Progressive Supranuclear Palsy, Parkinson's Disease, Frontotemporal Dementia, Huntington's Disease, Multiple System Atrophy | Alzheimer Society of Nova Scotia ; Dalhousie University ; Capital District Health Authority |
Available to the research community, The community can contribute to this resource | SCR_013838 | 2026-09-19 12:58:10 | 0 | |||||||
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Netherlands Brain Bank Resource Report Resource Website 100+ mentions |
Netherlands Brain Bank (RRID:SCR_013841) | NBB | biomaterial supply resource, material resource | A biomaterial supply resource which collects, stores, and disseminates diseased and healthy brain tissue. The Netherlands Brain Bank currently contains more than 3600 samples, and each sample includes a neuropathological report and donor medical history. The samples can additionally be matched with ante-mortem parameters and post-mortem parameters upon request. Sample types include cortex, spinal cord, cerebrospinal fluid, plasma, and DNA, among others. Database mining is available with a financial contribution. | biomaterial supply resource, brain, brain tissue, brain bank, diseased tissue, healthy tissue, FASEB list |
is listed by: Multiple Sclerosis Discovery Forum is related to: Multiple Sclerosis Discovery Forum |
Stichting MS Research ; Vrienden Loterij ; Stichting Parkinson Fonds ; Hersenstichting Nederland Breinbekend Werk ; Zabawas ; private donations |
Free, Available to the research community, The community can contribute to this resource, Some services require a contribution | SCR_013841 | 2026-09-19 12:58:10 | 186 | ||||||||
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Newcastle Brain Tissue Resource Resource Report Resource Website |
Newcastle Brain Tissue Resource (RRID:SCR_013843) | biomaterial supply resource, material resource | A biomaterial supply resource which archives and disseminates brain tissue for the study of normal brain aging and brain disorders. Researchers must create an account in order to browse the database of available tissue. Samples are distributed to researchers in such a way that the identity and personal information of donors is protected. | biomaterial resource, brain, brain tissue, brain bank, brain aging, brain disorder |
is listed by: Multiple Sclerosis Discovery Forum is related to: Multiple Sclerosis Discovery Forum has parent organization: Newcastle University; Newcastle upon Tyne; United Kingdom |
Medical Research Council ; NHS |
Available to the research community | SCR_013843 | 2026-09-19 12:58:10 | 0 | |||||||||
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Trinity Biobank Resource Report Resource Website 1+ mentions |
Trinity Biobank (RRID:SCR_013279) | Trinity Biobank | biomaterial supply resource, material resource | The Trinity Biobank was established in 2005 to serve the needs of researchers in the area of genetic epidemiology, population genetics and pharmacogenomics. Its services are available to researchers not only in Trinity College but to other institutions at home and abroad. We provide an automated DNA extraction service purifying large volumes blood (up to 10mL whole blood) and tissue DNA for archival and other purposes. In addition it makes available purified DNA and associated GWAS data from 2000 healthy donors for research use. A key requirement for reliable downstream use of DNA is purity and strand size. The quality of DNA in blood and tissue deteriorates upon storage without purification even at -80 degrees C. We ensure rapid turnaround of biological samples through automated extraction using the Qiagen Autopure system based on optimized ''salting out'' chemistry. The purified DNA sample may then be stored safely at -20 degrees C without deterioration thus freeing up valuable -80 degree C freezer space and the associated capital and maintenance cost as well as security and lab space provision. Automated DNA extraction is particularly suitable for high-throughput sample processing called for in epidemiological studies or simply for clearing sample inventory backlogs. The Trinity Biobank distributes control DNA to researchers as part of its remit to enhance the level of research activity and to synergize molecular medicine research nationally and internationally. The buffy coat collection has been made possible with the cooperation of the Irish Blood Transfusion Service (IBTS). An important requirement to access the collection is that the use of the samples relates only to ethically-approved research and to specifically-nominated research projects. The DNA collection consists of high quality human genomic DNA. Each of the available 2,000 samples is from a single individual and each sample comes with the age and gender data of the donor. The buffy coat sample is derived from the total white cell compliment (50mL buffy coat) of a blood donation (c 400mL). We will endeavor to fulfill samples number requests based on age and gender as best as possible. This collection has also been genotyped using the Affymetrix Genome-Wide Human SNP Array 6.0, featuring 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation (CNV). The DNA comes available as a 100ng/uL in 100uL of TE Buffer, ie in 10ug amounts in a separate screw-cap ampoule. The ampoules are shipped in 100-tube boxes (Sarstedt). Corresponding plasma (ACD) is also available on request. Genotype data is supplied in PLINK binary PED files format (http://pngu.mgh.harvard.edu/~purcell/plink/ ). | dna, blood, tissue, buffy coat, cell, packed cell, cultured cell, buccal cell, whole blood, bodily fluid, fresh, frozen, healthy, normal, genetic epidemiology, population genetics, pharmacogenomics, gene, genetics, genome-wide association study, genome-wide association study data, genotype, dna extraction, non-mammalian, bacteria, gram-positive bacteria, gram-negative bacteria |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Trinity College Dublin; Dublin; Ireland has parent organization: St. James Hospital; Dublin; Ireland |
Healthy, Normal | Public: Its services are available to researchers not only in Trinity College but to other institutions at home and abroad. The Trinity Biobank distributes control DNA to researchers as part of its remit to enhance the level of research activity and to synergize molecular medicine research nationally and internationally. It makes available purified DNA and associated GWAS data from 2000 healthy donors for research use. | nlx_25068 | http://www.tcd.ie/IMM/research_biobank.php | SCR_013279 | 2026-09-19 12:58:09 | 3 | ||||||
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Evaluation Instruments Bank Resource Report Resource Website 1+ mentions |
Evaluation Instruments Bank (RRID:SCR_013246) | assessment test provider, material resource | The EIB provides assessment tests for substance disorder related clinical instruments that are freely available. Details regarding copyright and/or possible use restrictions are specified for each instrument. Instruments are generally classed according to the intervention field they are designed to be used in (treatment, prevention, or harm reduction), though some instruments may be usable in more than one field. | drug, drug intervention, drug of abuse, assessment, harm reduction, human, adult human, early adult human, prevention, substance-related disorder, treatment | has parent organization: European Monitoring Centre for Drugs and Drug Addiction | nif-0000-24171 | SCR_013246 | EIB | 2026-09-19 12:58:09 | 3 | |||||||||
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Duke Human Heart Repository Resource Report Resource Website 50+ mentions |
Duke Human Heart Repository (RRID:SCR_013980) | biomaterial supply resource, material resource | A biomaterial supply resource which collects and disseminates human heart tissue. Samples include both failing and non-failing hearts, RNA/DNA analysis, tissue staining and immunofluorescence samples.The tissue that has been flash frozen and stored at -80˚C is acquired from distinct regions of the heart such as the LV free wall, septum, and valve leaflets. Individual sample sizes are typically 100-300mg for flash frozen tissues. The DHHR also serves as a resource for assay development, target identification, and sponsored research, capable of isolating cardiomyocytes from hearts and using them for in-vitro assays such as calcium handling, enzyme activity, signalling pathways and other biochemical research activities | biomaterial supply resource, human heart, human heart tissue, cardiovascular, tissue, tissue sample |
lists: American Heart Association lists: ASPET lists: Duke Biobank lists: International Society for Biological and Environmental Repositories lists: American Society for Cell Biology is listed by: Connected Researchers is related to: Connected Researchers has parent organization: Duke University; North Carolina; USA |
Free, Available to the research community | SCR_013980 | 2026-09-19 12:58:11 | 89 | ||||||||||
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SuBLIME Resource Report Resource Website 1+ mentions |
SuBLIME (RRID:SCR_014409) | software application, software resource, standalone software | Software used for detection of lesions in patients with multiple sclerosis. It provides an automated method for segmenting incident lesion voxels and allows for sensitive and specific detection of lesion incidence that can be applied to large collections of images. Using the explicit form of the statistical model, SuBLIME can be adapted to cases when more or fewer imaging sequences are available. | lesion, multiple sclerosis, detection, automated, segment, incident lesion voxel | Multiple sclerosis | PMID:22766673 | Source code available | SCR_014409 | 2026-09-19 12:58:12 | 3 | |||||||||
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University of Chicago Digestive Diseases Research Core Center Tissue Engineering and Cell Models Core Resource Report Resource Website 1+ mentions |
University of Chicago Digestive Diseases Research Core Center Tissue Engineering and Cell Models Core (RRID:SCR_015604) | TECM | biomaterial supply resource, material resource | Core that provides services such as a repository for intestinal cell lines, Tissue Engineering Models, experimental materials, and supplies for digestive disease research. | TECM, tissue engineering, cell models |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Chicago Digestive Diseases Research Core Center is organization facet of: University of Chicago Digestive Diseases Research Core Center |
digestive disease | NIDDK P30 DK042086 | Available to the research community | SCR_015604 | 2026-09-19 12:58:13 | 1 | |||||||
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Sanford Burnham Prebys Medical Discovery Institute Stem Cell Core Resource Report Resource Website |
Sanford Burnham Prebys Medical Discovery Institute Stem Cell Core (RRID:SCR_014856) | biomaterial supply resource, material resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented August 23, 2016. The former functions of this facility are split into two separate operations. The first is the generation and characterization of induced Pluripotent Stem Cells (iPSCs) is now being performed on a collaborative basis for both internal and external investigators with the Snyder lab. The second is a shared laboratory dedicated to the culture and analysis of stem cells that is available to SBP investigators. | stem cell, facility, la jolla, pluripotent stem cells, ipsc, analysis | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_014856 | SBP Medical Discovery Institute Stem Cell Core, SBP Stem Cell Core | 2026-09-19 12:58:12 | 0 | ||||||||||
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3D Ribosomal Modification Maps Database Resource Report Resource Website 1+ mentions |
3D Ribosomal Modification Maps Database (RRID:SCR_003097) | 3D rRNA modification maps | data or information resource, database | Database of maps showing the sites of modified rRNA nucleotides. Access to the rRNA sequences, secondary structures both with modification sites indicated, 3D modification maps and the supporting tables of equivalent nucleotides for rRNA from model organisms including yeast, arabidopsis, e. coli and human is provided. This database complements the Yeast snoRNA Database at UMass-Amherst and relies on linking to some content from that database, as well as to others by colleagues in related fields. Therefore, please be very cognizant as to the source when citing information obtained herein. Locations of modified rRNA nucleotides within the 3D structure of the ribosome. | human, plant, arabidopsis, ribosome, eukaryote, eubacteria, archaea, eukarya |
is related to: Yeast snoRNA Database has parent organization: University of Massachusetts Amherst; Massachusetts; USA |
U.S. Public Health Service ; NIGMS GM19351 |
PMID:17947322 | Free, Freely available | nif-0000-00552 | SCR_003097 | 2026-09-19 12:56:38 | 2 | ||||||
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MutDB Resource Report Resource Website 10+ mentions |
MutDB (RRID:SCR_003251) | data or information resource, database | Database with annotations for human variation data with protein structural information and other functionally relevant information, if available. The mutations are organized by gene. | web database, annotation database, human genome, human protein, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: Buck Institute; California; USA |
PMID:15980479 | Free, Freely available | biotools:mutdb, nif-0000-03173 | https://bio.tools/mutdb | SCR_003251 | 2026-09-19 12:56:39 | 10 | |||||||
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PReMod Resource Report Resource Website 10+ mentions |
PReMod (RRID:SCR_003403) | PReMod | data or information resource, database | Database that describes more than 100,000 computational predicted transcriptional regulatory modules within the human genome. These modules represent the regulatory potential for 229 transcription factors families and are the first genome-wide / transcription factor-wide collection of predicted regulatory modules for the human genome. The algorithm used involves two steps: (i) Identification and scoring of putative transcription factor binding sites using 481 TRANSFAC 7.2 position weight matrices (PWMs) for vertebrate transcription factors. To this end, each non-coding position of the human genome was evaluated for its similarity to each PWM using a log-likelihood ratio score with a local GC-parameterized third-order Markov background model. Corresponding orthologous positions in mouse and rat genomes were evaluated similarly and a weighted average of the human, mouse, and rat log-likelihood scores at aligned positions (based on a Multiz (Blanchette et al. 2004) genome-wide alignment of these three species) was used to define the matrix score for each genomic position and each PWM. (ii) Detection of clustered putative binding sites. To assign a module score to a given region, the five transcription factors with the highest total scoring hits are identified, and a p-value is assigned to the total score observed of the top 1, 2, 3, 4, or 5 factors. The p-value computation takes into consideration the number of factors involved (1 to 5), their total binding site scores, and the length and GC content of the region under evaluation. Users can retrieve all information for a given region, a given PWM, a given gene and so on. Several options are given for textual output or visualization of the data. | cis-regulatory module, genome, transcription factor binding site, chromosome, module, predict, gene |
is listed by: OMICtools has parent organization: McGill University; Montreal; Canada |
PMID:17148480 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-03334, OMICS_01873 | SCR_003403 | Predicted Regulatory Modules | 2026-09-19 12:56:40 | 11 |
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