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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Thermo Fisher: MicroCL 21R microcentrifuge
 
Resource Report
Resource Website
1+ mentions
Thermo Fisher: MicroCL 21R microcentrifuge (RRID:SCR_019047) instrument resource Refrigerated benchtop microcentrifuge with rotor designed to provide acceleration up to 21,100xg. Centrifuge, cooling centrifuge, benchtop microcentrifuge, Thermo Scientific, instrument, equipment is listed by: USEDit Restricted https://cdn.shopify.com/s/files/1/1726/3473/files/Sonicator_Catalog_2024.pdf?v=1704299404 SCR_019047 MicroCL 21R microcentrifuge 2026-08-01 12:06:28 1
Perkin Elmer: VICTOR3 multilabel plate reader
 
Resource Report
Resource Website
1+ mentions
Perkin Elmer: VICTOR3 multilabel plate reader (RRID:SCR_019232) instrument resource Versatile plate reader that can be used to measure fluorescence intensity from both top and bottom of plate, colorimetric absorbance and luminescence. Plate reader, measure fluorescence intensity, colorimetric absorbance, luminescence, instrument, equipment Restricted https://www.perkinelmer.com/lab-solutions/resources/docs/BRO_VICTOR3.pdf SCR_019232 VICTOR3 2026-08-01 12:06:23 4
MPVS Ultra Pressure Volume Loop System
 
Resource Report
Resource Website
1+ mentions
MPVS Ultra Pressure Volume Loop System (RRID:SCR_016179) resource System to record continuous measurements of left ventricular pressure with a conductance pressure-volume catheter. hardware, instrument, equipment, pressure, heart, cardiology, catheter SCR_016179 2026-08-01 12:05:30 2
NPI Electronic Miniature Headstage
 
Resource Report
Resource Website
1+ mentions
NPI Electronic Miniature Headstage (RRID:SCR_016102) resource Hardware that is a miniature headstage (without casing) for in-vivo experiments in freely moving animals'. instrument, equipment, hardware, microscope, magnification, headstage Commercially available, Available for purchase SCR_016102 2026-08-01 12:05:26 2
NanoMotor
 
Resource Report
Resource Website
10+ mentions
NanoMotor (RRID:SCR_016100) resource Hardware for performing patch clamping for in vivo cell recordings of freely moving animals. The setup consists of a support column with an enlarged base for mounting the assembly, a clip which allows for flexibility in placement, and an actuated axis fitted with a capillary holder for the reference electrode. hardware, instrument, equipment, in vivo, recording, cell, experiment, research, electrode, patch, clamp Commercially available http://www.nanotechnik.com/fileadmin/public/brochures/NM_invivo.pdf SCR_016100 2026-08-01 12:05:26 14
Illumina: iSeq 100 Sequencing System
 
Resource Report
Resource Website
1+ mentions
Illumina: iSeq 100 Sequencing System (RRID:SCR_016377) instrument resource Benchtop next-generation sequencer to sequence DNA and RNA. Instrument, Equipment, Hardware, Sequencer, Illumina, Sequencing, RNA, DNA has parent organization: Illumina
works with: SPAdes
Restricted https://drive.google.com/file/d/1U7-4WcU8rWYVYtkftlShvCofjPAeppR9/view?usp=drivesdk Model_Number_iSeq 100, SCR_020125 https://www.illumina.com/content/dam/illumina-marketing/documents/products/brochures/iseq-brochure-770-2017-038-web.pdf, https://www.illumina.com/content/dam/illumina/gcs/assembled-assets/marketing-literature/iseq-100-system-spec-sheet-m-gl-00456/iseq100-system-spec-sheet-m-gl-00456.pdf SCR_016377 iSeq 100, iSeq100 2026-08-01 12:05:38 4
Illumina: NovaSeq 6000 Sequencing System
 
Resource Report
Resource Website
100+ mentions
Illumina: NovaSeq 6000 Sequencing System (RRID:SCR_016387) instrument resource High-throughput platform used for next-generation sequencing (NGS) applications, including whole-genome, whole-exome, and whole-transcriptome sequencing. It is designed to provide a scalable, high-volume, and reliable way to sequence DNA and RNA for a wide range of genomic studies, from research to clinical applications. Instrument, equipment, sequencer, sequencing, dna, rna, platform, novaseq, sequencing system, USEDit https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_016387.pdf SCR_020150, Model_Number_NovaSeq_6000 https://www.illumina.com/systems/sequencing-platforms/novaseq/specifications.html SCR_016387 Illumina NovaSeq 6000 Sequencing, Illumina NovaSeq 6000 2026-08-01 12:05:38 277
Illumina: NextSeq 550 System
 
Resource Report
Resource Website
10+ mentions
Illumina: NextSeq 550 System (RRID:SCR_016381) instrument resource The NextSeq 550 System brings the power of a high-throughput sequencing system to your benchtop. With tunable output and high data quality, it provides the flexible power you need for whole-genome, transcriptome, and targeted resequencing. hardware, instrument, equipment, sequencer, sequencing, dna, rna, platform, nextseq series Commercially available, Available for purchase https://drive.google.com/file/d/1QpYWRs6dJVPOehmffnqBvJ-ChEyoJlra/view?usp=drivesdk SCR_020141 https://www.illumina.com/content/dam/illumina/gcs/assembled-assets/marketing-literature/nextseq-550-system-spec-sheet-m-gl-01298/nextseq-550-system-spec-sheet-m-gl-01298.pdf SCR_016381 NextSeq 550 2026-08-01 12:05:31 35
Janelia: Tip-Tilt-Z Sample Positioner
 
Resource Report
Resource Website
1+ mentions
Janelia: Tip-Tilt-Z Sample Positioner (RRID:SCR_016528) instrument resource Positioner for automated rotation of a head-fixed rodent specimen about the anterior-posterior and medio-lateral axes for imaging or other purposes. Provides automated Z translation and can be customized to accommodate various head bar designs. instrument, positioner, automated, rotation, head, fixed, rodent, imaging has parent organization: Janelia Research Commercially available, Free for Non Profit Research Janelia 2016-027 https://flintbox.com/public/project/31339/ SCR_016528 2026-08-01 12:05:45 1
Leica: Vibratome VT1000S Leica: Microsystems
 
Resource Report
Resource Website
50+ mentions
Leica: Vibratome VT1000S Leica: Microsystems (RRID:SCR_016495) instrument resource Vibrating blade microtome for sectioning by Leica Biosystems. Used in neurophysiology, neuropathology, experimental pathology, botany (roots and plants) and industry (foams)., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. instrument, histology, equipment, vibrating, blade, microtome, sectioning, vibratome, fix, tissue, neuropathology, pathology THIS RESOURCE IS NO LONGER IN SERVICE https://drive.google.com/file/d/1uhQbOLXtoHEZxoHQHcYaNAGk2C4UOUqs/view?usp=drivesdk https://www.leicabiosystems.com/sites/default/files/media_product-download/2021-03/Leica_VT1000S_IFU_2v4L_en.pdf https://www.leicabiosystems.com/es/equipo-histologia/microtomos-deslizantes/microtomos-de-cuchillas-vibrantes/detalles/product/leica-vt1000-s/ SCR_016495 Leica Vibratome VT1000S Leica Biosystems 2026-08-01 12:05:44 72
Particle Metrix: ZetaView Nanoparticle Tracking Analyzer
 
Resource Report
Resource Website
100+ mentions
Particle Metrix: ZetaView Nanoparticle Tracking Analyzer (RRID:SCR_016647) ZetaView NTA instrument resource Instrument for nanoparticle tracking analysis. A semi-automated method for the characterization of extracellular vesicles with associated analysis software by ParticleMetrix GmbH. instrument, nanoparticle, tracking, analysis, ParticleMetrix GmbH, extracellular, vesicles, method https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_016647.pdf https://partoshar.com/administrator/files/UploadFile/DLS/Zeta-View/Catalog/zetaview-en.pdf SCR_016647 ZetaView NTA, ZetaView Nanoparticle Tracking Analyzer 2026-08-01 12:05:49 290
Leica: EM UC7 ultramicrotome
 
Resource Report
Resource Website
1+ mentions
Leica: EM UC7 ultramicrotome (RRID:SCR_016694) instrument resource Leica EM UC7 Ultramicrotome equipped with the Leica EM FC7 provides advanced sectioning capabilities for both room temperature and cryogenic applications. The system enables preparation of ultra-thin and semi-thin sections suitable for electron microscopy, light microscopy, and atomic force microscopy, ensuring high precision and reproducibility across diverse research workflows. Instrument for cutting specimens at room and low temperature. Used to produce both semi- and ultra-thin sections as well as smooth surfaces of biological samples . Cryo-ultramicrotome, instrument, Leica Microsystem, ultramicrotome, cutting, speciment, thin, section, biological, samples Commercially available https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_016694.pdf Model_Number_EM_UC7 https://www.leica-microsystems.com/de/produkte/em-probenvorbereitung/ultramikrotome-kryo-ultramikrotome/details/product/leica-em-uc7/ SCR_016694 2026-08-01 12:05:38 6
Sutter: Micropipette puller P-97
 
Resource Report
Resource Website
10+ mentions
Sutter: Micropipette puller P-97 (RRID:SCR_016842) instrument resource P-97 Flaming / Brown Micropipette Puller is an instrument for fabricating micropipettes, patch pipettes and microinjection needles with improvements in mechanical, electronic and software design for better control of the pulling process and a higher degree of reproducibility. Sutter Instruments, P-97 Flaming, micropipette, puller, microinjection, instrument Commercially available https://www.sutter.com/manuals/P-97-DOM_OpMan.pdf http://bronjo.com/sutter-instruments-p-97-flaming-brown-micropipette-puller/ SCR_016842 2026-08-01 12:05:43 12
Tecan Life Sciences
 
Resource Report
Resource Website
10+ mentions
Tecan Life Sciences (RRID:SCR_016771) Tecan organization Commercial provider of automated laboratory instruments and solutions for clinical diagnostics, basic and translational research and drug discovery. commercial, provider, automated, laboratory, instrument, antibody, supplier, biomedical Wikidata: Q30292046, grid.438178.1 https://ror.org/03rk04a05 SCR_016771 2026-08-01 12:05:43 40
Kinarm: End-Point Lab
 
Resource Report
Resource Website
1+ mentions
Kinarm: End-Point Lab (RRID:SCR_017060) instrument resource Robotics research tool designed to make quantitative neurological assessments of sensorimotor, proprioception, and cognitive brain function by BKIN Technologies. Robotic manipulandum with display for studying arm movements. Allows to assess coordination of limbs at multiple joints while measuring joint specific force. instrument, BKIN Technologies, kinarm, end, point, robot, quantitative, neurological, assessment, sensorimotor, proprioception, cognitive, limb, arm, brain, function has parent organization: Queens University; Ontario; Canada Commercially available https://kinarm.com/wp-content/uploads/2023/03/Kinarm_Tech_End-Point-Lab_PN14332-1-Nov-21.pdf https://www.bkintechnologies.com/bkin-products/kinarm-end-point-lab/ SCR_017060 KINARM End-Point Lab, Kinesiological Instrument for Normal and Altered Reaching Movements End-Point Lab 2026-08-01 12:05:50 1
PSTNet: MRI Simulator
 
Resource Report
Resource Website
PSTNet: MRI Simulator (RRID:SCR_002460) MRI Simulator instrument resource MRI Simulator that provides a realistic approximation of an actual MRI scanner to allow habituation and training of participants in an environment less daunting than a real scanner. Special populations such as children, the elderly, and psychiatric patients, are often prone to claustrophobia and anxiety in the bore of a magnet, and consequently have a much higher rate of terminating the experiment or scan session before its completion. Some centers that have dealt with these populations estimate a 50%-80% failure rate. With the use of the MRI Simulator this failure rate can often be reduced below 5%, improving cost effectiveness. experiment control, hardware, magnetic resonance, training, simulator, mri, scanner, instrument, equipment is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) Restricted https://drive.google.com/file/d/1ZMEBlvJqOupTbVemgrdVN66Bf6Xa2Dhr/view?usp=drivesdk nlx_155834 http://www.nitrc.org/projects/mri_simulator, https://pstnet.com/wp-content/uploads/2018/05/MRI-Simulator-Pamphlet-.pdf SCR_002460 Psychology Software Tools MRI Simulator 2026-08-01 12:01:48 0
MRI Digital Projection System
 
Resource Report
Resource Website
MRI Digital Projection System (RRID:SCR_002486) Hyperion instrument resource MRI Digital Projection System that uses Digital Light Processing (DLP) technology providing microsecond pixel rise times, outstanding contrast with all-digital fiber optic control that allows you to project crystal clear, sharp images. Includes: * High resolution (1024x768) DLP Projector with RF filtered enclosure, custom lens assembly, digital video (DVI) over fiber, high flow fans, internal thermal sensor * Control room device to perform DVI to Fiber conversion, remotely power down the projector, and allow use of projector remote control from control room * 30 meter fiber optic cable that runs between the projector and projector control station * Heavy duty, magnet compatible, projector stand (assembly required) * Heavy duty, magnet compatible mirror stand with mirror (assembly required) * High resolution, lenticular pitch rear projection screen for high quality image reproduction * Optional VGA to DVI converter (native DVI video cards on Windows or Macintosh recommended) experiment control, hardware, magnetic resonance, stimulus presentation, mri, projector, instrument, equipment is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) Restricted https://drive.google.com/file/d/1OPZZ054sMCqq-z1Fiuof2gEoLkK8Knp6/view?usp=drivesdk nlx_155879 http://www.nitrc.org/projects/projector, https://pstnet.com/wp-content/uploads/2018/08/2018ProductSheetHyperion.pdf SCR_002486 Hyperion MRI Digital Projection System 2026-08-01 12:02:08 0
Neurogrid
 
Resource Report
Resource Website
10+ mentions
Neurogrid (RRID:SCR_005024) Neurogrid instrument resource A specialized hardware platform that will perform cortex-scale emulations while offering software-like flexibility. With sixteen 12x14 sq-mm chips (Neurocores) assembled on a 6.5x7.5 sq-in circuit board that can model a slab of cortex with up to 16x256x256 neurons - over a million! The chips are interconnected in a binary tree by 80M spike/sec links. An on-chip RAM (in each Neurocore) and an off-chip RAM (on a daughterboard, not shown) softwire vertical and horizontcal cortical connections, respectively. It provides an affordable option for brain simulations that uses analog computation to emulate ion-channel activity and uses digital communication to softwire synaptic connections. These technologies impose different constraints, because they operate in parallel and in serial, respectively. Analog computation constrains the number of distinct ion-channel populations that can be simulatedunlike digital computation, which simply takes longer to run bigger simulations. Digital communication constrains the number of synaptic connections that can be activated per secondunlike analog communication, which simply sums additional inputs onto the same wire. Working within these constraints, Neurogrid achieves its goal of simulating multiple cortical areas in real-time by making judicious choices. simulation, neuron, cortex, synapse, analog vlsi, instrument, equipment, hardware has parent organization: Stanford University; Stanford; California NSF ;
NIH
PMID:17959490 nlx_97879 SCR_005024 2026-08-01 12:02:52 14
Bioscreen: C MBR
 
Resource Report
Resource Website
10+ mentions
Bioscreen: C MBR (RRID:SCR_007172) instrument resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 18,2025. Biosceen C is a system designed for automating routine microbiology work. It uses a unique micro-plate format (10x10 wells), so called Honeycomb format, which is especially well suited for highly accurate temperature control. It features two covered honeycomb plates making it possible to run 200 samples simultaneously. Its unique patented incubator system features temperature control maintaining the set temperature with a 0,1 degree centigrade accuracy, while avoiding condensation of liquid on the inside of the micro plate lid. It can cool down the samples 6 degrees centigrade below the ambient temperature and its working range is from 1 to 60 degrees in steps of 0,1 degree centigrade. Sponsors: Oy Growth Curves Ab Ltd is a privately held company established in 2002 by a former Labsystems executive. It aquired the Bioscreen product line from Thermo Labsystems and has continued to maintain the product excellence Bioscreen is known for. Today the company is controlled by a new generation of owner operators, dedicated to continue developing Bioscreen to meet the demands of today''s users Keywords: Microbiology, Automation, Honeycomb, Incubation, System, Temperature, Technology, Supplier, hardware, instrument, equipment, microbiology, temperature THIS RESOURCE IS NO LONGER IN SERVICE https://drive.google.com/file/d/1lLs8c8XLh4lBQubvWwha5HcQA0U7chwr/view?usp=drivesdk nif-0000-30203 https://www.dynex.cz/data/machines/gc_factsheet_a4.pdf SCR_007172 Bioscreen C 2026-08-01 12:03:29 22
GenoMiner
 
Resource Report
Resource Website
GenoMiner (RRID:SCR_001202) GenoMiner software resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022. A next generation sequencing data analysis computer for biologists with or without IT background. It has an easy to-use graphical interface to analyze sequencing data in with only 15 clicks. A range of standard, add-on and custom applications help analyze and visualize data generated by Next Generation Sequencing machines. These are installed on each GenoMiner by default: * Reference assembly * De novo assembly * ChiP-Seq * BLAST * Hybrid de novo assembly * Hybrid reference assembly Add-on applications: * Quality assesment * RNA-Seq * Copy Number Variation (CNV) * Multiple Sequence Alignment * miRNA-Seq * Variant Calling next-generation sequencing, reference assembly, de novo assembly, chip-seq, blast, hybrid de novo assembly, hybrid reference assembly, genome, computer, hardware, instrument, equipment is listed by: OMICtools PMID:16267081 THIS RESOURCE IS NO LONGER IN SERVICE OMICS_02149 http://www.astridbio.com/genominer.html SCR_001202 GenoMiner: Genome Analyzer 2026-08-01 12:01:34 0

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