Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Current Facets and Filters

  • Mentions:yes (facet)

Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

16,813 Results - per page

Show More Columns | Download Top 1000 Results

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
SkateBase
 
Resource Report
Resource Website
10+ mentions
SkateBase (RRID:SCR_005302) SkateBase database, production service resource, data analysis service, data or information resource, service resource, analysis service resource Portal supporting the North East Bioinformatics Collaborative''s project to sequence the genome of the Little Skate. Provided is a clearinghouse for Little Skate Genome Project and other publicly available Skate and Ray (Batoidea) genome data, and tools for data visualization and analysis. Little Skate Genome Project The little skate (Leucoraja erinacea) is a chondrichthyan (cartilaginous) fish native to the east coast of North America. Elasmobranchs (Skates, Rays, and Sharks) exhibit many fundamental vertebrate characteristics, including a neural crest, jaws and teeth, an adaptive immune system, and a pressurized circulatory system. These characteristics have been exploited to promote understanding about human physiology, immunology, stem cell biology, toxicology, neurobiology and regeneration. The development of standardized experimental protocols in elasmobranchs such as L. erinacea and the spiny dogfish shark (Squalus acanthias) has further positioned these organisms as important biomedical and developmental models. Despite this distinction, the only reported chondrichthyan genome is the low coverage (1.4x) draft genome of the elephant shark (Callorhinchus milii). To close the evolutionary gaps in available elasmobranch genome sequence data, and generate critical genomic resources for future biomedical study, the genome of L. erinacea is being sequenced by the North East Bioinformatics Collaborative (NEBC). As close evolutionary relatives, the little skate sequence will facilitate studies that employ dogfish shark and other elasmobranchs as model organisms. Skate tools include the SkateBLAST and the Skate Genome Browsers: Little Skate Mitochondrion, Thorny Skate Mitochondrion, and Ocellate Spot Skate Mitochondrion. little skate, leucoraja erinacea, sequence, genome, mitochondrion, thorny skate, ocellate spot skate, FASEB list has parent organization: North East Cyberinfrastructure Consortium
has parent organization: University of Delaware; Delaware; USA
has parent organization: University of Delaware Skate Genome Project
NIGMS 3P20GM103446-12S1 nlx_144350 SCR_005302 2026-08-15 11:23:13 40
PubBrain
 
Resource Report
Resource Website
1+ mentions
PubBrain (RRID:SCR_005387) PubBrain database, production service resource, data analysis service, data or information resource, service resource, analysis service resource A literature search and visualization tool that allows end users to enter any PubMed query and see that query rendered as a heatmap illustrating which regions of interest are most commonly mentioned within the search results. To use PubBrain, simply enter any valid PubMed search in the search box. neuroanatomy is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is related to: PubMed
has parent organization: Poldracklab Portal
NIMH RO1MH082795;
NIMH PL1MH083271;
NIDCR UL1DE019580;
NCRR P20RR020750
nlx_144484 http://www.nitrc.org/projects/pubbrain SCR_005387 PubBrain Database, pubbrain.org 2026-08-15 11:23:05 8
Computer Retrieval of Information on Scientific Projects Thesaurus
 
Resource Report
Resource Website
10+ mentions
Computer Retrieval of Information on Scientific Projects Thesaurus (RRID:SCR_005301) CRISP ontology, data or information resource, controlled vocabulary Ontology of Computer retrieval of Information on Scientific Projects (CRISP). umls is listed by: BioPortal nlx_157374 SCR_005301 2026-08-15 11:23:12 41
inGAP
 
Resource Report
Resource Website
10+ mentions
inGAP (RRID:SCR_005261) inGAP software resource Software mining pipeline guided by a Bayesian principle to detect single nucleotide polymorphisms, insertion and deletions by comparing high-throughput pyrosequencing reads with a reference genome of related organisms. This pipeline is extended to identify and visualize large-size structural variations, including insertions, deletions, inversions and translocations. structural variation, genome, next-generation sequence, genome analysis, alignment, single nucleotide polymorphism, insertion, deletion, indel, inversion, translocation, windows, linux, macos/x, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
has parent organization: SourceForge
has parent organization: Fudan University; Shanghai; China
has parent organization: Chinese Academy of Sciences; Beijing; China
OMICS_00319, biotools:ingap https://bio.tools/ingap SCR_005261 inGAP-sv, inGAP-sv: structural variation detection and visualization, integrative next-generation genome analysis pipeline 2026-08-15 11:23:12 29
PEMer
 
Resource Report
Resource Website
1+ mentions
PEMer (RRID:SCR_005263) software resource Software package as computational framework with simulation-based error models for inferring genomic structural variants from massive paired-end sequencing data. Package is composed of three modules, PEMer workflow, SV-Simulation and BreakDB. PEMer workflow is a sensitive software for detecting SVs from paired-end sequence reads. SV-Simulation randomly introduces SVs into a given genome and generates simulated paired-end reads from novel genome. structural variation, genome, next-generation sequencing, bio.tools, bio.tools is listed by: OMICtools
is listed by: Debian
is listed by: bio.tools
is related to: BreakDB
has parent organization: European Molecular Biology Laboratory
PMID:19236709 biotools:pemer, OMICS_00320 https://bio.tools/pemer, https://bio.tools/pemer SCR_005263 Paired-End Mapper 2026-08-15 11:23:13 7
phantompeakqualtools
 
Resource Report
Resource Website
50+ mentions
phantompeakqualtools (RRID:SCR_005331) phantompeakqualtools software resource Software package that computes quick but highly informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to obtain robust estimates of the predominant fragment length or characteristic tag shift values in these assays. chip-seq, dnase-seq, faire-seq, mnase-seq, dataquality, enrichment, phantompeak, cross-correlation, spppeakcaller, chipseq, dnaseseq, fairseq, mnaseseq, bio.tools is listed by: OMICtools
is listed by: Debian
is listed by: bio.tools
has parent organization: Google Code
MIT License biotools:phantompeakqualtools, OMICS_00431 https://bio.tools/phantompeakqualtools SCR_005331 phantompeakqualtools - Computes quick but highly informative enrichment and quality measures and fragment lengths for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data 2026-08-15 11:23:14 87
CoIN
 
Resource Report
Resource Website
100+ mentions
CoIN (RRID:SCR_005332) CoIN service resource A web-based system that assess articles according to their term correlations among sentences. It employs the co-occurrence relations and their network centralities to evaluate the influence of biomedical terms from Comparative Toxicogenomics Database (CTD)., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. gene, disease, chemical, biomedical, association, document triage, database, FASEB list is listed by: OMICtools
has parent organization: National Cheng Kung University; Tainan; Taiwan
THIS RESOURCE IS NO LONGER IN SERVICE OMICS_01177 SCR_005332 Co-occurrence Interaction Nexus, CoIN: A network exploration for document triage, CoIN: Co-occurrence Interaction Nexus 2026-08-15 11:23:04 138
FORCE11
 
Resource Report
Resource Website
10+ mentions
FORCE11 (RRID:SCR_005334) FORCE11 blog, portal, data or information resource, community building portal, knowledge environment, narrative resource A collaboration which works to transform scholarly communications through advanced use of computers and the Web. FORCE11 advocates the digital publishing of papers in order to enable more effective scholarly communication. The virtual community also advocates the publication of software tools and research communication by means of social media channels. As such, FORCE11 provides access to information and tools for the wider scientific community. scholarly communication, scholarship, dissemination, data sharing, knowledge, information technology, semantics, digital publishing, information gathering, research communication, e-scholarship, digital object, scientific communication lists: Scholarly Ontologies Project
lists: Academia.edu
lists: StratML
lists: Evernote
lists: NPG publishing format
lists: Fiduswriter
lists: Altmetric Bookmarklet
lists: Altmetric Explorer
lists: Epistemio
lists: Hypothes.is
lists: Bio-Formats
lists: iSpyBio.com
lists: BioLexicon
lists: Craig Mod
lists: KLEIO
lists: aTag Generator
lists: Knowledge Engineering from Experimental Design
lists: Utopia Docs
lists: Zebrafish - SCORE Imaging: Specimen in a Corrected Optical Rotational Enclosure
lists: Semantic Measures Library
lists: Open Education Database
lists: Brainspell
lists: IPython
lists: Adobe FormsCentral
lists: Altmetric API
lists: myExperiment
lists: ISA Infrastructure for Managing Experimental Metadata
lists: Minimum Information for Biological and Biomedical Investigations
lists: A modular structure for scientific articles in an electronic environment
lists: Liquid Publications: Scientific Publications meet the Web
lists: AQnowledge Bookmarklet
lists: Authorea
lists: Bamboo DiRT
lists: Altmetric Badges
lists: ESIP Data Management Short Course for Scientists
lists: Etherpad
lists: Commons In A Box
lists: CKAN
lists: DMPTool
lists: eScholarship
lists: Git2PROV
lists: OMERO
lists: GitHub
lists: GROTOAP
lists: ImpactStory
lists: JCB DataViewer
lists: Memento
lists: OME-TIFF Format
lists: OpenDOAR
lists: Open Journal Systems
lists: Paper Rejection Repository
lists: PLoS Impact Explorer
lists: RDFaCE
lists: Scholarly Open Access
lists: ShareLaTeX
lists: Mendeley
lists: W3C Provenance Incubator Group Wiki
lists: A.nnotate
lists: Annotation Ontology
lists: Support-of-PDF-annotations
lists: Neuroscience Information Framework
lists: AlzSWAN Knowledge Base
lists: ResearchCompendia
lists: resExomeDB
lists: SobekCM
lists: W3C Open Annotation Community Group
lists: Webmaker
lists: Wikispaces
lists: Mobile Assay
lists: WorkingWiki
lists: Overleaf
lists: Xournal
lists: Citation Style Language
lists: EnablingOpenScholarship
lists: JournalGuide
lists: Mindtouch DekiWiki
lists: Knowledge Blog
lists: DataCite
lists: FAIRsharing
lists: FigShare
lists: CiTO - the Citation Typing Ontology
lists: DOAJ - Directory of Open Access Journals
lists: Code4Lib Journal WordPress Customizations
lists: U-Compare
lists: SciCrunch Registry
lists: Google Docs
lists: CSIBS
lists: Europe PubMed Central
lists: ORNL DAAC Data Product Citation Policy
lists: Pensoft
lists: OpenCalais
lists: Universal Numerical Fingerprint
lists: FAIRSharing Catalogue of Standards
lists: Nanopub.org
lists: JISC Open Citations
lists: W3C Provenance Working Group
lists: Workflow4Ever
lists: Scholarly Electronic Publishing Bibliography
lists: ROARMAP: Registry of Open Access Repositories Mandatory Archiving Policies
lists: ROAR
lists: total impact.org
lists: Publish or perish
lists: Scalar
lists: PDFX
lists: lapdftext
lists: Cohere
lists: Data Citation Awareness
lists: DataCite Ontology
lists: Semantic MediaWiki
lists: Rubriq
lists: VisTrails
lists: RSC Prospect
lists: HyBrow (Hypothesis Browser)
lists: Biotea
lists: crowdLabs
lists: Argumentative Zoning: Information Extraction from Scientific Articles
lists: Synapse
lists: BioCreative
lists: EZID
lists: ResearchGate
lists: F1000: Faculty of 1000 Post-Publication Peer Review
lists: Acumen Consortium
lists: DOI
lists: GREC Corpus
lists: National Centre for Text Mining
lists: SPAR - Semantic Publishing and Referencing Ontologies
lists: re3data.org
lists: DataUp
lists: Open Archives Initiative - Object Reuse and Exchange Initiative
lists: Sapienta
lists: OBO
lists: GENIA Project: Mining literature for knowledge in molecular biology
lists: ORCID - Open Researcher and Contributor ID
lists: Wikibooks
lists: CERMINE
lists: CiteAb
lists: iAnnotate
lists: Eagle I
lists: AcroMine
lists: FACTA+.
lists: Open Provenance Model
lists: RightField
lists: SEEK
lists: BioPortal
lists: Reflect
lists: Ontology Development and Information Extraction
lists: PubMed
lists: Open PHACTS
lists: NIFSTD
lists: Open Provenance Model Vocabulary
lists: MEDIE
lists: Ontology for Biomedical Investigations
lists: Antibody Registry
lists: Semantic Web Applications in Neuromedicine (SWAN) Ontology
is related to: ShareLaTeX
is related to: ResearchCompendia
is related to: Overleaf
has parent organization: University of California at San Diego; California; USA
Gordon and Betty Moore Foundation Free, Public, The community can contribute to this resource, Acknowledgement requested nlx_149434 SCR_005334 FORCE11 - the Future of Research Communications and e-Scholarship, Force 11 2026-08-15 11:23:13 15
PheKB
 
Resource Report
Resource Website
10+ mentions
PheKB (RRID:SCR_005292) PheKB software repository, knowledge environment, software resource Collaborative environment of building and validating electronic phenotype algorithms using electronic medical records (EMRs) and natural language processing (NLP) for use in genome-wide association studies (GWAS). On this site you can: View existing algorithms, Enter or create new algorithms, Collaborate with others to create or review algorithms, View implementation details for existing algorithms. The Electronic Medical Records and Genomics Network (eMERGE) has investigated whether data captured through routine clinical care using electronic medical records (EMRs) can identify disease phenotypes with sufficient positive and negative predictive values for use in genome-wide association studies (GWAS). Most EMRs captured key information (diagnoses, medications, laboratory tests) used to define phenotypes in a structured format; in addition, natural language processing has also been shown to improve case identification rates. PheKB is an outgrowth of that validation effort. Phenotype algorithms can be viewed by data modalities or methods used: CPT codes, ICD 10 codes, ICD 9 codes, Laboratories, Medications, Vital Signs, Natural Language Processing Algorithms can also be viewed by: * Implementation results (positive predictive value, sensitivity, publications) * Institution * Work Group phenotype, electronic medical record, medical record, human, clinical, white blood cell, red blood cell, lipid, algorithm, height, cardiac conduction, genome-wide association study, natural language processing is related to: eMERGE Network: electronic Medical Records and Genomics
has parent organization: Vanderbilt University; Tennessee; USA
Atrial fibrillation, Crohn''''s disease, Multiple Sclerosis, Rheumatoid arthritis, Type 2 diabetes mellitus, Dementia, Cataracts, Hypothyroidism, Diabetic Retinopathy, High-Density Lipoprotein, Peripheral Arterial Disease PMID:20362271 nlx_144339 SCR_005292 Phenotype KnowledgeBase, PheKB - a knowledgebase for discovering phenotypes from electronic medical records 2026-08-15 11:23:12 32
SWEET-DB
 
Resource Report
Resource Website
1+ mentions
SWEET-DB (RRID:SCR_005324) SWEET, SWEET2 production service resource, data analysis service, web service, data access protocol, software resource, service resource, analysis service resource Program that rapidly converts the primary sequence of a complex carbohydrate, as defined by standard nomenclature, directly into a reliable 3D molecular model by linking together preconstructed 3D molecular templates of monosaccharides in the manner specified by the sequence and then optimizing the 3D structure using the MM3 force field. The user interaction is supported by an input spreadsheet consisting of a grid of sugar symbol and connection type cells. Several ways to visualize and to output the generated structures and related information are implemented. carbohydrate, saccharide, 3d model, sequence, oligosaccharide, polysaccharide, 3d spatial image, carbohydrate sequence, modeling, carbohydrate modeling is related to: Distance Mapping
is related to: GlyProt
has parent organization: glycosciences.de
PMID:10498779 nif-0000-03520 http://www.dkfz-heidelberg.de/spec2/sweetdb/, http://www.glycosciences.de/sweetdb/ SCR_005324 SWEET II, Sweet-2 2026-08-15 11:23:13 2
Oklahoma Medical Research Foundation
 
Resource Report
Resource Website
50+ mentions
Oklahoma Medical Research Foundation (RRID:SCR_005287) OMRF institution A biomedical research institute that aims to understand and develop more effective treatments for human disease, focusing on critical research areas such as heart disease, cancer, lupus and Alzheimer's disease. human disease, cardiovascular disease, cancer, lupus, alzheimer’s disease, treatment, biomedical research institute is parent organization of: C. elegans Gene Knockout Consortium
is parent organization of: Oklahoma Medical Research Foundation OMRF Clinical Genomics Center Core Facility
Heart disease, Cancer, Lupus, Alzheimer's disease Public grid.274264.1, ISNI: 0000 0000 8527 6890, Wikidata: Q7082264, nlx_144327, Crossref funder ID: 100008907 https://ror.org/035z6xf33 SCR_005287 2026-08-15 11:23:12 61
SeqWare
 
Resource Report
Resource Website
10+ mentions
SeqWare (RRID:SCR_005289) SeqWare software resource A portable software infrastructure designed to analyze massive genomics datasets produced by contemporary and emerging technologies, in particular Next Generation Sequencing (NGS) platforms. It consists of a comprehensive suite of infrastructure tools focused on enabling the end-to-end analysis of sequence data ? from from raw base calling to analyzed variants ready for interpretation by users. SeqWare is tool agnostic, it is a framework for building analysis workflows and does not provide specific implementations out-of-the-box. You use SeqWare to create high-throughput infrastructure for NGS analysis using whatever analysis tools you like. SeqWare currently provides 5 main tools specifically designed to support massively parallel sequencing technologies. All tools can be used together or separately: * MetaDB: provides a common database to store metadata used by all components. * Portal: a LIMS-like web application to manage samples, record computational events, and present results back to end users. * Pipeline: a workflow engine that is capable of wrapping and combining other tools (BFAST, BWA, SAMtools, etc) into complex pipelines, recording metadata about the analysis, and facilitates automation of pipelines based on metadata. * Web Service: a programmatic API that lets people build new tools on top of the project * Query Engine: a NoSQL database designed to store and query variants and other events inferred from sequence data. mapreduce/hadoop, next generation sequencing, genomics is listed by: OMICtools PMID:21210981 Acknowledgement requested, GNU General Public License, v3 OMICS_01221 SCR_005289 SolexaTools 2026-08-15 11:23:03 13
Coremine Medical
 
Resource Report
Resource Website
1+ mentions
Coremine Medical (RRID:SCR_005323) Coremine Medical service resource Service to access comprehensive information on diseases, drugs, treatments and medical biology. It is ideal for those seeking an overview of a complex subject while allowing the possibility to drill down to specific details. Search results are presented in a dashboard format comprized of panels containing various categories of information ranging from introductory sources to the latest scientific articles. disease, drug, treatment, medical biology, text mining, health, medicine, biology, network, database is listed by: OMICtools
is related to: MeSH
is related to: Entrez Gene
is related to: MEDLINE
is related to: PubMed
is related to: DrugBank
is related to: Gene Ontology
is related to: UniProt
has parent organization: PubGene
NLM ;
European Union FP7 ;
Research Council of Norway ;
Innovation Norway
Copyrighted OMICS_01179 SCR_005323 2026-08-15 11:23:13 6
Oxford Centre for Functional MRI of the Brain
 
Resource Report
Resource Website
100+ mentions
Oxford Centre for Functional MRI of the Brain (RRID:SCR_005283) FMRIB Centre data or information resource, portal, topical portal The FMRIB Centre is a multi-disciplinary neuroimaging research facility, which focuses on the use of Magnetic Resonance Imaging (MRI) for neuroscience research, along with related technologies such as Transcranial Magnetic Stimulation, transcranial Direct Cortical Stimulation and EEG. FMRIB is composed of research groups in all aspects of brain imaging research, including physics, analysis, basic science and clinical neuroscience. We were recently awarded 8 million pounds by the MRC, EPSRC, Wolfson Foundation and University of Oxford to purchase and install new 7T and 3T leading-edge MRI systems to enable us to image brain structure and function at even higher resolution than currently possible. fmri, mri, neuroimaging, transcranial magnetic stimulation, transcranial direct cortical stimulation, eeg, neuroscience, brain, brain structure, brain function, fsl, pain, imaging, diffusion imaging, cognitive neuroscience, language has parent organization: University of Oxford; Oxford; United Kingdom
is parent organization of: FslAtlasIntegration
MRC ;
EPSRC ;
Wolfson Foundation ;
University of Oxford; Oxford; United Kingdom
nlx_144318 https://www.fmrib.ox.ac.uk/ SCR_005283 Functional Magnetic Resonance Imaging of the Brain Center, FMRIB Center, Oxford FMRIB Centre, Oxford Functional Magnetic Resonance Imaging of the Brain Centre, Oxford Functional Magnetic Resonance Imaging of the Brain Center, Functional Magnetic Resonance Imaging of the Brain Centre, Oxford FMRIB Center 2026-08-15 11:23:12 238
Mapping Data to the Talairach Atlas
 
Resource Report
Resource Website
1+ mentions
Mapping Data to the Talairach Atlas (RRID:SCR_005284) Mapping Data to the Talairach Atlas data processing software, software application, image processing software, software resource A sample script on how to map some numbers to brain regions, using the Talairach-Tournoux Atlas database. For example, put the value 0.379 in each hippocampus voxel, and the value 0.666 in each superior temporal gyrus voxel. talairach, atlas, brain, label has parent organization: Analysis of Functional NeuroImages nlx_144320 SCR_005284 2026-08-15 11:23:13 8
Johns Hopkins Laboratory of Brain Anatomical MRI
 
Resource Report
Resource Website
100+ mentions
Johns Hopkins Laboratory of Brain Anatomical MRI (RRID:SCR_005280) Laboratory of Brain Anatomical MRI database, laboratory portal, portal, data or information resource, organization portal The goal of our laboratory is to develop new MR technologies to improve the resolution and contrast of MRI and apply them to observe brain anatomy to answer various types of biological questions. Currently we have three major research targets: Characterization of mouse brain development; Human white matter anatomy and development; and Development of diffusion tensor imaging technique and technology dissemination. The DTI database (Under the DTI Download Tab) contains raw and processed DTI data of normal population. Currently we have 2.5 mm isotropic resolution images and 2.2 mm isotropic resolution images. Only 2.5 mm data are available from this site. If you are interested in the high-resolution images, please contact susumu @ mri.jhu.edu. This database is open to public once the user is registered. Basic imaging parameters can be also downloaded. magnetic resonance imaging, brain, image, human, mouse, diffusion tensor imaging, white matter, brain development, monkey, pediatric, neonate, atlas, template, software, FASEB list has parent organization: Johns Hopkins University School of Medicine; Baltimore, Maryland; USA nlx_144314 SCR_005280 Johns Hopkins Medical Institute Laboratory of Brain Anatomical MRI 2026-08-15 11:23:13 101
Gene Wiki
 
Resource Report
Resource Website
1+ mentions
Gene Wiki (RRID:SCR_005317) Gene Wiki data or information resource, wiki, narrative resource The Gene Wiki is a project that facilitates transferring information on human genes to Wikipedia article stubs with the goal of promoting collaboration and expansion of the articles. Number of gene articles The human genome contains an estimated 20,00025,000 protein-coding genes. The goal of the Gene Wiki project is to create seed articles for every notable human gene, that is, every gene whose function has been assigned in the peer-reviewed scientific literature. Approximately half of human genes have assigned function, therefore the total number of articles seeded by the Gene Wiki project would be expected to be in the range of 10,000 - 15,000. To date, approximately 10,271 articles have been created or augmented to include Gene Wiki project content. Expansion Once seed articles have been established, the hope and expectation is that these will be annotated and expanded by editors ranging in experience from the lay audience to students to professionals and academics. Proteins encoded by genes The majority of genes encode proteins hence understanding the function of a gene generally requires understanding of the function of the corresponding protein. In addition to including basic information about the gene, the project therefore also includes information about the protein encoded by the gene. Stubs for the Gene Wiki project are created by a bot and contain links to the following primary gene/protein databases * HUGO Gene Nomenclature Committee official gene name * Entrez Gene database * OMIM (Mendelian Inheritance in Man) database that catalogues all the known diseases with a genetic component * Amigo Gene Ontology * HomoloGene gene homologs in other species * SymAtlasRNA gene expression pattern in tissues * Protein Data Bank 3D structure of protein encoded by the gene * Uniprot (universal protein resource) a central repository of protein data gene, genome, human, annotation has parent organization: Wikipedia PMID:18613750 nlx_144371 SCR_005317 GeneWiki 2026-08-15 11:23:13 3
Neuro Bureau
 
Resource Report
Resource Website
1+ mentions
Neuro Bureau (RRID:SCR_005357) Neuro Bureau blog, portal, data or information resource, community building portal, knowledge environment, narrative resource A neuroscience collaboratory that supports open neuroscience, which basically encompasses the unrestricted sharing of: analytic tools, computational resources, data, and knowledge. Its goal is to establish a spirit and forum for open neuroscience, and to facilitate the translation of that ethos into action by conducting successful large open interdisciplinary collaborative efforts such as releasing the preprocessed version of the ADHD-200 competition dataset. The Brain-Art Competition is likewise an effort to bring attention to the more aesthetically-oriented aspects of their field, and to publicize and encourage creative developments taking place at the nexus of art and neuroimaging. neuroimaging, imaging, brain, neuroscience, data sharing, community, magnetic resonance is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is related to: ADHD-200 Preprocessed Data
is related to: ADHD-200 Sample
is related to: Brainspell
is parent organization of: brainhack.org
is parent organization of: ADHD-200 Preprocessed Data
is parent organization of: Brain-Art Competition
is parent organization of: Neuro Bureau - Berlin Mind and Brain Sample
Available for download nlx_144424 http://www.nitrc.org/projects/neurobureau SCR_005357 The Neuro Bureau 2026-08-15 11:23:04 1
National AIDS Research Institute
 
Resource Report
Resource Website
50+ mentions
National AIDS Research Institute (RRID:SCR_005355) NARI institution In the early nineties it became evident that HIV infection was spreading widely in India and the national efforts for control of HIV infection needed to be backed by quality research. It was also realized that AIDS, being a multifaceted disease, needed multi-disciplinary research involving virology, immunology, microbiology, clinical research, epidemiology, field based trials and social and behavioral research. An Institute devoted exclusively to HIV/ AIDS that could undertake research of such a diversity and magnitude was established to meet this requirement. National AIDS Research Institute (NARI) was established in October 1992 in Bhosari, Pune on a seven acre plot. The Institute has progressively expanded its activities in various aspects of research on HIV and AIDS through infra-structural development, capacity building & research programmes. The activities of NARI are supported by the ICMR & numerous extramural agencies. For the fiscal year 2005-2006 the ICMR allocated 5.66 crores for NARI. Additionally, over 13 crores have been generated through extramural sources. The Institute''s research activities are guided by a Scientific Advisory Committee which includes eminent scientists from varied disciplines. All research projects are reviewed & approved by the Ethics Committee which also ensures that research is conducted with highest ethical standards. Establishment of a Community Advisory Board which acts as an interface between the community and the researchers is a pioneering effort by NARI. aids, human, human immunodeficiency virus ICMR ;
extramural agencies
ISNI: 0000 0004 1803 003X, grid.419119.5, nlx_144414 https://ror.org/05etrx234 http://www.nari-icmr.res.in/index.php SCR_005355 National AIDS Research Institute Pune 2026-08-15 11:23:14 57
AIDS.gov
 
Resource Report
Resource Website
1+ mentions
AIDS.gov (RRID:SCR_005356) AIDS.gov data or information resource, portal, topical portal AIDS.gov works to increase HIV testing and care among people most at-risk for, or living with, HIV, by using emerging communication strategies to provide access to Federal HIV information, policies (e.g. the National HIV/AIDS Strategy), programs, and resources. Objectives # Expand visibility of timely and relevant Federal HIV policies, programs, and resources to the American public. # Increase use of new media tools by government, minority, and other community partners to extend the reach of HIV programs to communities at greatest risk. # Increase knowledge about HIV and access to HIV services for people most at-risk for, or living with, HIV. Unless otherwise noted, material presented on the AIDS.gov Web site is considered Federal government information and is in the public domain. That means this information may be freely copied and distributed. We request that you use appropriate attribution to AIDS.gov. AIDS.gov receives planning guidance from a cross agency planning group and uses a logic model (70 KB) and Communications Plan (702 KB) to guide AIDS.gov activities. aids, human, human immunodeficiency virus has parent organization: U.S. Department of Health and Human Services
is parent organization of: AIDS.gov Podcast
is parent organization of: AIDS.gov Blog
nlx_144415 SCR_005356 2026-08-15 11:23:14 6

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. RRID Portal Resources

    Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.