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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Alzheimers Disease International Resource Report Resource Website 10+ mentions |
Alzheimers Disease International (RRID:SCR_004303) | ADI | topical portal, disease-related portal, workshop, funding resource, portal, data or information resource, meeting resource, training resource | Alzheimer''s Disease International (ADI) believes that the key to winning the fight against dementia lies in a unique combination of Global Solutions and local knowledge. As such, it works locally, by empowering Alzheimer associations to promote and offer care and support for people with dementia and their carers, while working globally to focus attention on dementia. Our board is composed of people from around the world, and our staff team is based in London. ADI is the international federation of Alzheimer associations around the world, in official relations with the World Health Organization. Each member is the Alzheimer association in their country who support people with dementia and their families. ADI''s vision is an improved quality of life for people with dementia and their families throughout the world. ADI runs the Alzheimer University, a series of practical workshops aimed at helping the staff and volunteers of Alzheimer associations build and strengthen their organisations. ADI holds an annual international conference which is the longest running international conference on dementia. The conference is a unique multi-disciplinary event which unites people with an interest in dementia from around the world. World Alzheimer''s Day, celebrated on September 21 each year, is an opportunity to raise global awareness about dementia and its impact on families and the important work of our members throughout the world. Medical research is also important, and some of ADI''s member Alzheimer associations actively support research in their own countries. More information about research can be found on the web sites of Alzheimer''s Association (USA), Alzheimer''s Society (UK), Alzheimer Society of Canada, or the association in your country. For the fourth year, the Fondation M��d��ric Alzheimer and ADI are running Alzheimer''s Awards for evidence-based psychosocial interventions for people with dementia and their carers. | alzheimers disease, dementia | is related to: Greek Association of Alzheimers Disease and Related Disorders | nlx_143673 | SCR_004303 | Alzheimer''s Disease International | 2026-08-15 11:22:45 | 19 | ||||||||
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PeaKDEck Resource Report Resource Website 10+ mentions |
PeaKDEck (RRID:SCR_004268) | PeaKDEck | software resource | A peak-calling software program for DNAseI-seq data. | perl, command line, gui |
is listed by: OMICtools has parent organization: University of Oxford; Oxford; United Kingdom |
PMID:24407222 | OMICS_02207 | SCR_004268 | 2026-08-15 11:22:49 | 10 | ||||||||
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Broadband Forum Resource Report Resource Website 1+ mentions |
Broadband Forum (RRID:SCR_004260) | data or information resource, portal, topical portal | The Broadband Forum is the central organization driving broadband wireline solutions and empowering converged packet networks worldwide to better meet the needs of vendors, service providers and their customers. They develop multi-service broadband packet networking specifications addressing interoperability, architecture and management. Their work enables home, business and converged broadband services, encompassing customer, access and backbone networks. Keywords: Vendor, Service, Broadband, Wireline, Forum, Network, | nif-0000-30225 | SCR_004260 | Broadband Forum | 2026-08-15 11:22:49 | 1 | |||||||||||
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Creative Biomart Resource Report Resource Website 10+ mentions |
Creative Biomart (RRID:SCR_004255) | commercial organization | An Antibody supplier | nlx_152336 | SCR_004255 | 2026-08-15 11:22:45 | 28 | ||||||||||||
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DER Finder Resource Report Resource Website 1+ mentions |
DER Finder (RRID:SCR_004250) | DER Finder | software toolkit, data processing software, software application, software resource, software library | R package for differential expression analysis of RNA-seq data. | differential expression, rna-seq, false discovery rate, genomics, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools |
PMID:24398039 | Free, Public | biotools:derfinder, OMICS_02208 | https://bio.tools/derfinder | SCR_004250 | derfinder | 2026-08-15 11:22:44 | 5 | |||||
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qiqqa Resource Report Resource Website 1+ mentions |
qiqqa (RRID:SCR_004440) | Qiqqa | software resource | Qiqqa is a free reference management tool that provides all the tools you need to manage your documents and notes effectively, visualize your ideas, and find insights you would have missed otherwise. Engineered by academics, its mission is to make your research life easier. Qiqqa allows users to annotate PDF''s, assign tags, share documents and offers cloud storage for a nominal fee. We help academics, researchers, and professionals manage all their PDFs and get more out of them, with our award winning Qiqqa software. * PDF management, OCR, reading, annotation * Unique tools to understand and discover * Cloud sync, cite, and much much more * Free. Trusted by academia and industry for all five stages of the knowledge lifecycle. Add all your papers, and it helps you do all the rest, quicker. # Organize # Discover # Review and Understand # Collaborate # Create | reference manager, freemium, document, literature | nlx_43805 | SCR_004440 | 2026-08-15 11:22:48 | 1 | ||||||||||
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NIMH Data Archive Resource Report Resource Website 100+ mentions |
NIMH Data Archive (RRID:SCR_004434) | NDA | database, data repository, storage service resource, data or information resource, service resource | The National Institute of Mental Health Data Archive (NDA) makes available human subjects data collected from hundreds of research projects across many scientific domains. Research data repository for data sharing and collaboration among investigators. Used to accelerate scientific discovery through data sharing across all of mental health and other research communities, data harmonization and reporting of research results. Infrastructure created by National Database for Autism Research (NDAR), Research Domain Criteria Database (RDoCdb), National Database for Clinical Trials related to Mental Illness (NDCT), and NIH Pediatric MRI Repository (PedsMRI). | afni brik, ascii, bshort, bfloat, connectome file format, cifti, clinical neuroinformatics, cor, dicom, imaging genomics, inc, minc2, nifti, os independent, philips par/rec, tex, vrml, phenotype, neuroimaging, genomic, gender, male, female, dti, fmri, mri, spectroscopy, eeg, microarray, snp, cnv, next-generation sequencing, gene regulation, gene expression, genotyping, pedigree, clinical assessment, FASEB list |
uses: HED Tags is used by: National Database for Clinical Trials related to Mental Illness is used by: RDoCdb is used by: NIH Heal Project is recommended by: National Library of Medicine is recommended by: NIDDK Information Network (dkNET) is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: re3data.org is related to: National Database for Clinical Trials related to Mental Illness is related to: RDoCdb has parent organization: National Institute of Mental Health hosts: GUID Tool |
Autism, Autism spectrum disorder, Asperger Syndrome, Normal control, Sibling control, Parental control, Fragile X syndrome | NIMH ; NINDS ; NIEHS ; NICHD ; Center for Information Technology |
Restricted | nlx_143735, r3d100010717, r3d100012653 | http://www.nitrc.org/projects/ndarportal, https://data-archive.nimh.nih.gov/, https://doi.org/10.17616/R37K63, https://doi.org/10.17616/R3XV5P | http://ndar.nih.gov/ | SCR_004434 | NDAR, National Database for Autism Research, National Institute of Mental Health Data Archive, National Database for Autism Research (NDAR) | 2026-08-15 11:22:57 | 424 | |||
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Origene China Resource Report Resource Website 1+ mentions |
Origene China (RRID:SCR_004436) | OriGene China | commercial organization | A commercial antibody vendor. |
is listed by: One Mind Biospecimen Bank Listing is related to: OriGene |
nlx_43459 | SCR_004436 | 2026-08-15 11:22:47 | 7 | ||||||||||
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Spanki Resource Report Resource Website 1+ mentions |
Spanki (RRID:SCR_004469) | Spanki | software resource | A set of tools to facilitate analysis of alternative splicing from RNA-SEQ data. | windows | is listed by: OMICtools | PMID:24209455 | OMICS_01414 | SCR_004469 | Splicing Analysis Kit | 2026-08-15 11:22:53 | 8 | |||||||
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BrainNet Europe Resource Report Resource Website 10+ mentions |
BrainNet Europe (RRID:SCR_004461) | BNE | organization portal, data or information resource, consortium, portal | THIS RESOURCE IS NO LONGER IN SERVICE.Documented on July 7, 2022. Consortium of 19 brain banks across Europe with an aim to harmonize neuropathological diagnostic criteria and develop gold standards for quality, safety and ethics standards for brain banking. BrainNet Europe also contributes to research on rare diseases, such as: Pick''s disease or other rare forms of dementia, as well as to questions after the events in the aging brain. Anyone can be a donor - irrespective of disease of the central nervous system or not, because for research purposes, one does not only need tissue samples from ill donors, but also from healthy ones for comparison. | central nervous system, clinical, brain research, brain tissue, brain, tissue, late adult human, brain bank, gold standard, neuropathological diagnosis, tissue handling, safety, quality control, ethics, post mortem, data sharing, tissue sampling, autopsy, microdissection, diagnosis |
is listed by: One Mind Biospecimen Bank Listing is listed by: Consortia-pedia is related to: Medical University of Vienna Institute of Neurology is related to: Human Brain Tissue Bank has parent organization: Ludwig-Maximilians-University; Munich; Germany is parent organization of: BrainNet Europe Sampling Protocols |
Central nervous system disorder, Normal control, Aging, Neurological disease, Psychiatric disease, Pick''s disease, Dementia | European Union FP6 LSHM-CT-2004-503039 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_45326 | SCR_004461 | BrainNet Europe Consortium | 2026-08-15 11:22:58 | 25 | |||||
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Network Science Resource Report Resource Website 1+ mentions |
Network Science (RRID:SCR_004459) | NetSci | topical portal, portal, data or information resource, data set, narrative resource | Scientific focus articles and general resources for scientists within the pharmaceutical and biotechnology industries that take a comprehensive look at the industry and the tools that are in use to speed drug discovery and development. Resources include a forum, courseware, and a listing of professional societies, associations and companies/organizations. In addition to features on classical drug discovery, NetSci will address biotechnology, genomic research, and materials design as well as subjects suggested by readers. Network Science has collected an extensive list of professional societies and associations and companies/organizations that are a part of the world-wide efforts in drug discovery and development. These organizations were selected based upon the fact that they contribute to pharmaceutical research and development and healthcare throughout the world. The forum for experts to explore and discuss current applications of science and technology with their colleagues world-wide, permits publication of scientific data without the delays inherent in traditional printed media and encourages immediate dialog using hypertext (a contextual linkage of related information sources), multimedia, interactive electronic feedback forms, and automatic electronic mail connections which are not available within any other media. CourseWare provides a collection of materials which examine the pharmaceutical industry and the use of technology in drug discovery. Topics range from an introduction to the drug development process to an in-depth examination of the tools and techniques used in pharmaceutical research and development. If your would like to see a topic added to this collection, or know about companies and products that you feel would be of interest to the readers, would like to add your organization to the list or correct the listing that is on-line, please contact us. | pharmaceutical, therapeutic agent, drug discovery, drug, drug development, pharmaceutical research, forum, biotechnology, genomic research, materials design, biotechnology, pharmaceutic, cheminformatics, combinatorial chemistry, computational chemistry, screening, lims, chemistry | Novartis ; Apple Computer ; Silicon Graphics ; Molecular Solutions |
For personal use only. No redistribution is allowed without written permission from Network Science Corporation., The community can contribute to this resource | nlx_45289 | SCR_004459 | Network Science - NetSci | 2026-08-15 11:22:48 | 1 | |||||||
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PASHA Resource Report Resource Website 10+ mentions |
PASHA (RRID:SCR_004455) | PASHA | software resource | A parallel short read assembler for large genomes using de Bruijn graphs. |
is listed by: OMICtools has parent organization: SourceForge |
PMID:21867511 | OMICS_00024 | SCR_004455 | 2026-08-15 11:22:53 | 10 | |||||||||
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miRDeepFinder Resource Report Resource Website 1+ mentions |
miRDeepFinder (RRID:SCR_004456) | miRDeepFinder | software resource | Provides an comprehensive workflow of analyzing data from plant microRNA (miRNA) deep sequencing. | is listed by: OMICtools | PMID:22290409 | OMICS_00362 | SCR_004456 | 2026-08-15 11:22:57 | 2 | |||||||||
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Stem Cell Discovery Engine Resource Report Resource Website 50+ mentions |
Stem Cell Discovery Engine (RRID:SCR_004453) | SCDE | database, data repository, production service resource, storage service resource, data or information resource, software resource, source code, service resource, analysis service resource | An online database of curated cancer stem cell (CSC) experiments coupled to the Galaxy analytical framework. Driven by a need to improve our understanding of molecular processes that are common and unique across cancer stem cells (CSCs), the SCDE allows users to consistently describe, share and compare CSC data at the gene and pathway level. The initial focus has been on carefully curating tissue and cancer stem cell-related experiments from blood, intestine and brain to create a high quality resource containing 53 public studies and 1098 assays. The experimental information is captured and stored in the multi-omics Investigation/Study/Assay (ISA-Tab) format and can be queried in the data repository. A linked Galaxy framework provides a comprehensive, flexible environment populated with novel tools for gene list comparisons against molecular signatures in GeneSigDB and MSigDB, curated experiments in the SCDE and pathways in WikiPathways. Investigation/Study/Assay (ISA) infrastructure is the first general-purpose format and freely available desktop software suite targeted to experimentalists, curators and developers and that: * assists in the reporting and local management of experimental metadata (i.e. sample characteristics, technology and measurement types, sample-to-data relationships) from studies employing one or a combination of technologies; * empowers users to uptake community-defined minimum information checklists and ontologies, where required; * formats studies for submission to a growing number of international public repositories endorsing the tools, currently ENA (genomics), PRIDE (proteomics) and ArrayExpress (transcriptomics). Galaxy allows you to do analyses you cannot do anywhere else without the need to install or download anything. You can analyze multiple alignments, compare genomic annotations, profile metagenomic samples and much much more. Best of all, Galaxy''''s history system provides a complete analyses record that can be shared. Every history is an analysis workflow, which can be used to reproduce the entire experiment. The code for this Galaxy instance is available for download from BitBucket. | stem cell, analysis, cancer stem cell, galaxy, gene, pathway, molecular signature, tissue, bio.tools, FASEB list |
is listed by: Debian is listed by: bio.tools is related to: Galaxy is related to: Galaxy is related to: ISA Infrastructure for Managing Experimental Metadata has parent organization: Harvard T.H. Chan School of Public Health |
Cancer | NCI 1RC2CA148222-01 | PMID:22121217 | Free, The community can contribute to this resource | biotools:scde_discovery, nlx_44656 | https://bio.tools/scde_discovery | SCR_004453 | Harvard Stem Cell Discovery Engine, SCDE - Stem Cell Discovery Engine | 2026-08-15 11:22:57 | 57 | |||
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Cell Marque Resource Report Resource Website 1+ mentions |
Cell Marque (RRID:SCR_004449) | commercial organization | An Antibody supplier | nlx_152327 | SCR_004449 | Cell Marque Corp. | 2026-08-15 11:22:48 | 7 | |||||||||||
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Sterol and Isoprenoid Research Consortium Resource Report Resource Website 1+ mentions |
Sterol and Isoprenoid Research Consortium (RRID:SCR_004367) | STAIR | data or information resource, portal, training resource, topical portal | A consortium which represents a collaborative group of investigators along with their academic medical centers and the National Institutes of Health, patient advocacy groups, and clinical research programs. Members of the STAIR Consortium are dedicated to participating in clinical research regarding disorders related to cholesterol and other sterol and isoprenoid metabolism. The overall objective of the Sterol and Isoprenoid Research Consortium (STAIR) is to study a group of diseases bound by common biochemistry, impact on health, and rarity. STAIR will conduct several clinical studies, support a full-scale training program in the field of sterol and isoprenoid diseases, and engage several patient advocacy groups in consortium activities. Researchers interested in partnering with STAIR may contact its Administrative Director. | consortium, topical portal, clinical research, rare disease, smith lemli opitz syndrome, sjogren larsson syndrome, niemann pick disease type c, mevalonate kinase deficiency, hyperimmunoglobulinemia d syndrome, mevalonic aciduria, cerebrotendinous, xanthomatosis, sitosterolemia |
is affiliated with: RDCRN Patient Contact Registry has parent organization: Oregon Health and Science University; Oregon; USA has parent organization: Rare Diseases Clinical Research Network |
Smith-Lemli-Opitz Syndrome, Niemann-Pick Disease Type C, Sjogren-Larsson Syndrome, Hyperimmunoglobulinemia D with Periodic Fever Syndrome, Sitosterolemia, Cerebrotendinous Xanthomatosis | Office of Rare Diseases Research ; Eunice Kennedy Shriver National Institute of Child Health and Human Development |
Public, Researchers may apply to partner with STAIR | nlx_143697 | SCR_004367 | STAIR Consortium | 2026-08-15 11:22:55 | 3 | |||||
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TissueNet Resource Report Resource Website 1+ mentions |
TissueNet (RRID:SCR_004489) | tn | commercial organization | THIS RESOURCE IS NO LONGER IN SERVICE, documented on August 17,2021. Manufacturer of allograft tissue grafts in the United States in the ortho-biologics field of medicine. They develop new products for the patients they serve, including the UltraGraft non-irradiated & sterile line of allograft tissue implants., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | allograft, tissue, implant | is listed by: One Mind Biospecimen Bank Listing | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_47663 | SCR_004489 | 2026-08-15 11:22:58 | 1 | ||||||||
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MGED Ontology Resource Report Resource Website 1+ mentions |
MGED Ontology (RRID:SCR_004484) | MO | ontology, data or information resource, controlled vocabulary | An ontology including concepts, definitions, terms, and resources for a standardized description of a microarray experiment in support of MAGE v.1. The MGED ontology is divided into the MGED Core ontology which is intended to be stable and in synch with MAGE v.1; and the MGED Extended ontology which adds further associations and classes not found in MAGE v.1. These terms will enable structure queries of elements of the experiments. Furthermore, the terms will also enable unambiguous descriptions of how the experiment was performed. | microarray, biomaterial, treatment, mage, owl |
is listed by: BioPortal is related to: MIAME is related to: MIAME is related to: RNA Abundance Database has parent organization: Functional Genomics Data Society has parent organization: SourceForge |
NIBIB ; NHGRI P41HG003619 |
PMID:16428806 | nlx_47223 | http://purl.bioontology.org/ontology/MO | SCR_004484 | Microarray and Gene Expression Data Ontology | 2026-08-15 11:22:58 | 1 | |||||
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Office of Naval Research Resource Report Resource Website 1+ mentions |
Office of Naval Research (RRID:SCR_004366) | ONR | institution | Organization within the United States Department of the Navy responsible for the science and technology programs of the U.S. Navy and Marine Corps. | Government granting agency | has parent organization: U.S. Department of Defense | ISNI: 0000 0001 0257 7469, grid.482851.2, Wikidata: Q1063818, Crossref funder ID: 100000006, nlx_144142 | https://ror.org/00rk2pe57 | SCR_004366 | 2026-08-15 11:22:51 | 8 | ||||||||
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National Autonomous University of Mexico; Mexico City; Mexico Resource Report Resource Website 1+ mentions |
National Autonomous University of Mexico; Mexico City; Mexico (RRID:SCR_004360) | UNAM | university | Founded in 1551, this research university features murals by Diego Rivera and other famous artists. |
is parent organization of: RegulonDB is parent organization of: ProOpDB is parent organization of: National Autonomous University of Mexico Microscopy Core Facility is parent organization of: National Autonomous University of Mexico Materials Research Institute Electron Microscopy University Laboratory Core Facility |
nlx_151584, Crossref funder ID:501100005739, ISNI:0000 0001 2159 0001, Wikidata:Q222738, grid.9486.3 | https://ror.org/01tmp8f25 | SCR_004360 | Universidad Nacional Autonoma de Mexico, National Autonomous University of Mexico, Universidad Nacional Aut�noma de M�xico | 2026-08-15 11:22:46 | 7 |
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