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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
Eigensoft
 
Resource Report
Resource Website
1000+ mentions
Issue
Eigensoft (RRID:SCR_004965) EIGENSOFT software resource, software toolkit EIGENSOFT package combines functionality from our population genetics methods (Patterson et al. 2006) and our EIGENSTRAT stratification method (Price et al. 2006). The EIGENSTRAT method uses principal components analysis to explicitly model ancestry differences between cases and controls along continuous axes of variation; the resulting correction is specific to a candidate marker''s variation in frequency across ancestral populations, minimizing spurious associations while maximizing power to detect true associations. The EIGENSOFT package has a built-in plotting script and supports multiple file formats and quantitative phenotypes. Source code, documentation and executables for using EIGENSOFT 3.0 on a Linux platform can be downloaded. New features of EIGENSOFT 3.0 include supporting either 32-bit or 64-bit Linux machines, a utility to merge different data sets, a utility to identify related samples (accounting for population structure), and supporting multiple file formats for EIGENSTRAT stratification correction. population genetics, genetics, stratification, variation is listed by: Debian
is listed by: OMICtools
is listed by: SoftCite
has parent organization: Harvard Medical School; Massachusetts; USA
PMID:17194218
DOI:10.1038/ng1847
OMICS_07868, nlx_93059 https://sources.debian.org/src/eigensoft/ http://genepath.med.harvard.edu/~reich/Software.htm SCR_004965 SciCrunch Registry EIGENSOFT Software 2026-11-07 12:03:34 1299
Bioconductor
 
Resource Report
Resource Website
10000+ mentions
Bioconductor (RRID:SCR_006442) software repository, software resource, software toolkit Software repository for R packages related to analysis and comprehension of high throughput genomic data. Uses separate set of commands for installation of packages. Software project based on R programming language that provides tools for analysis and comprehension of high throughput genomic data. catalog, analysis, genomic, metadata, comprehension, statistical, data lists: MSstats
lists: MetaCyto
lists: MetaNeighbor
lists: tximport
lists: clusterProfiler
lists: ropls
lists: FlowSOM
lists: scran
lists: Rsubread
lists: riboSeqR
lists: Biostrings
lists: ConsensusClusterPlus
lists: DESeq2
lists: GenomicFeatures
lists: affy
lists: affydata
lists: Genomic Ranges
lists: Goseq
lists: GAGE
lists: CATALYST
lists: Scmap
lists: Scfind
lists: GenomicRanges
lists: org.Rn.eg.db
lists: Extending Guilt by Association by Degree
lists: ggtree
lists: StructuralVariantAnnotation
lists: scTHI
lists: EnhancedVolcano
lists: DEGreport
lists: variancePartition
lists: biomaRt
lists: MSnbase
lists: ReactomePA
lists: SynergyFinder
lists: CiteFuse
lists: fgsea
lists: GSVA
lists: SimFFPE
lists: FilterFFPE
lists: PhenStat
lists: ChIPseeker
lists: AUCell
lists: svaNUMT
lists: KEGGgraph
lists: epialleleR
lists: microbiome
lists: Orthology.eg.db
lists: org.Hs.eg.db
lists: ExperimentHub
lists: combi
is listed by: OMICtools
is listed by: Gene Ontology Tools
is listed by: SoftCite
is affiliated with: RnaSeqGeneEdgeRQL
is related to: asSeq
is related to: Gene Ontology
is related to: CRCView
is related to: R Project for Statistical Computing
is related to: GEO2R
is related to: LIMMA
is related to: VisR
is related to: edgeR
is related to: IMEx - The International Molecular Exchange Consortium
is related to: CATALYSTLite
is related to: ascend
is related to: minet
has parent organization: Fred Hutchinson Cancer Center
is parent organization of: ncdfFlow
is parent organization of: GenomicRanges
is parent organization of: ReadqPCR
is parent organization of: flowCL
is parent organization of: flowBin
is parent organization of: CorMut
is parent organization of: metaSeq
is parent organization of: VariantAnnotation
is parent organization of: ReQON
is parent organization of: timecourse
is parent organization of: RmiR.Hs.miRNA
is parent organization of: AffyRNADegradation
is parent organization of: ArrayExpress (R)
is parent organization of: GEOquery
is parent organization of: MIMOSA
is parent organization of: HEM
is parent organization of: CNTools
is parent organization of: cn.FARMS
is parent organization of: Clonality
is parent organization of: TransView
is parent organization of: pvac
is parent organization of: QUALIFIER
is parent organization of: flowStats
is parent organization of: rTANDEM
is parent organization of: flowFlowJo
is parent organization of: iASeq
is parent organization of: OLINgui
is parent organization of: SigFuge
is parent organization of: Rdisop
is parent organization of: GeneExpressionSignature
is parent organization of: iBMQ
is parent organization of: TDARACNE
is parent organization of: flowQ
is parent organization of: FlipFlop
is parent organization of: RmiR
is parent organization of: bsseq
is parent organization of: ExomePeak
is parent organization of: flowWorkspace
is parent organization of: massiR
is parent organization of: rbsurv
is parent organization of: GeneMeta
is parent organization of: MergeMaid
is parent organization of: categoryCompare
is parent organization of: metahdep
is parent organization of: snpStats: SnpMatrix and XSnpMatrix classes and methods
is parent organization of: CNVtools
is parent organization of: CGEN
is parent organization of: RCASPAR
is parent organization of: iterativeBMAsurv
is parent organization of: multtest
is parent organization of: globaltest
is parent organization of: MinimumDistance
is parent organization of: VegaMC
is parent organization of: VanillaICE
is parent organization of: SNPchip
is parent organization of: SMAP
is parent organization of: quantsmooth
is parent organization of: mBPCR
is parent organization of: ITALICS
is parent organization of: GenoSet
is parent organization of: exomeCopy
is parent organization of: CGHregions
is parent organization of: CGHbase
is parent organization of: beadarraySNP
is parent organization of: GLAD
is parent organization of: methylMnM
is parent organization of: methyAnalysis
is parent organization of: ARRmNormalization
is parent organization of: ChIPsim
is parent organization of: yaqcaffy
is parent organization of: wateRmelon
is parent organization of: sRAP
is parent organization of: spotSegmentation
is parent organization of: SNM
is parent organization of: SNAGEE
is parent organization of: Simpleaffy
is parent organization of: qcmetrics
is parent organization of: MANOR
is parent organization of: limmaGUI
is parent organization of: ffpe
is parent organization of: dyebias
is parent organization of: DEXUS
is parent organization of: BeadDataPackR
is parent organization of: aroma.light
is parent organization of: ArrayTools
is parent organization of: beadarray
is parent organization of: arrayQuality
is parent organization of: arrayMvout
is parent organization of: affyQCReport
is parent organization of: affyPLM
is parent organization of: AffyExpress
is parent organization of: waveTiling
is parent organization of: gprege
is parent organization of: oneChannelGUI
is parent organization of: LMGene
is parent organization of: factDesign
is parent organization of: pickgene
is parent organization of: betr
is parent organization of: SCAN.UPC
is parent organization of: arrayQualityMetrics
is parent organization of: CALIB
is parent organization of: DEDS
is parent organization of: Harshlight
is parent organization of: MiChip
is parent organization of: OCplus
is parent organization of: bridge
is parent organization of: fRMA
is parent organization of: genArise
is parent organization of: lapmix
is parent organization of: maCorrPlot
is parent organization of: maSigPro
is parent organization of: MACAT
is parent organization of: maigesPack
is parent organization of: MDQC
is parent organization of: metaArray
is parent organization of: nnNorm
is parent organization of: plgem
is parent organization of: PVCA
is parent organization of: RAMA
is parent organization of: stepNorm
is parent organization of: virtualArray
is parent organization of: LPE
is parent organization of: vsn
is parent organization of: ACME
is parent organization of: CoGAPS
is parent organization of: flowFP
is parent organization of: rMAT
is parent organization of: SLqPCR
is parent organization of: nondetects
is parent organization of: unifiedWMWqPCR
is parent organization of: sSeq
is parent organization of: CNVrd2
is parent organization of: plateCore
is parent organization of: RSVSim
is parent organization of: TCC
is parent organization of: CQN
is parent organization of: COMPASS
is parent organization of: flowClust
is parent organization of: SPADE
is parent organization of: OrderedList
is parent organization of: SamSPECTRAL
is parent organization of: flowUtils
is parent organization of: RchyOptimyx
is parent organization of: TEQC
is parent organization of: flowType
is parent organization of: ADaCGH2
is parent organization of: flowViz
is parent organization of: flowTrans
is parent organization of: flowQB
is parent organization of: shinyTANDEM
is parent organization of: flowPlots
is parent organization of: flowPhyto
is parent organization of: flowCore
is parent organization of: flowMerge
is parent organization of: flowMap
is parent organization of: flowMeans
is parent organization of: spliceR
is parent organization of: flowMatch
is parent organization of: flowFit
is parent organization of: flowCyBar
is parent organization of: BEAT
is parent organization of: flowBeads
is parent organization of: CAMERA - Collection of annotation related methods for mass spectrometry data
is parent organization of: MBASED
is parent organization of: MethylAid
is parent organization of: sapFinder
is parent organization of: Pathview
is parent organization of: DSS
is parent organization of: RMassBank
is parent organization of: iontree
is parent organization of: Basic4Cseq
is parent organization of: BiGGR
is parent organization of: mzR
is parent organization of: PAPi
is parent organization of: CGHnormaliter
is parent organization of: Chimera
is parent organization of: BRAIN
is parent organization of: tweeDEseq
is parent organization of: SurvComp
is parent organization of: Triplex
is parent organization of: OmicCircos
is parent organization of: ggbio
is parent organization of: HTqPCR
is parent organization of: NormqPCR
is parent organization of: ddCt
is parent organization of: EasyqpcR
is parent organization of: SWAN
is parent organization of: PING
is parent organization of: DMRforPairs
is parent organization of: SeqGSEA
is parent organization of: h5vc
is parent organization of: deepSNV
is parent organization of: RUVSeq
is parent organization of: BHC
is parent organization of: epigenomix
is parent organization of: IRanges
is parent organization of: GeneNetworkBuilder
is parent organization of: MethylSeekR
is parent organization of: SRAdb
is parent organization of: casper
is parent organization of: htSeqTools
is parent organization of: ChIPXpress
is parent organization of: methVisual
is parent organization of: DeconRNASeq
is parent organization of: EDASeq
is parent organization of: RIPSeeker
is parent organization of: ShortRead
is parent organization of: seqbias
is parent organization of: DEGseq
is parent organization of: arrayMagic
is parent organization of: easyRNASeq
is parent organization of: DNAcopy
is parent organization of: CRLMM
is parent organization of: motifRG
is parent organization of: MMDiff
is parent organization of: MiRaGE
is parent organization of: LVSmiRNA
is parent organization of: ExiMiR
is parent organization of: RPA
is parent organization of: CexoR
is parent organization of: lumi
is parent organization of: baySeq
is parent organization of: tRanslatome
is parent organization of: DNaseR
is parent organization of: DEXSeq
is parent organization of: ChIPpeakAnno
is parent organization of: inSilicoMerging
is parent organization of: minfi
is parent organization of: Methylumi
is parent organization of: miRNApath
is parent organization of: sva package
is parent organization of: dmrFinder
is parent organization of: rqubic
is parent organization of: BicARE
is parent organization of: iBBiG
is parent organization of: eisa
is parent organization of: ChAMP
is parent organization of: cghMCR
is parent organization of: Bioconductor mailing list
is parent organization of: DiffBind
is parent organization of: NarrowPeaks
is parent organization of: CSAR
is parent organization of: CSSP
is parent organization of: TargetScore
is parent organization of: snapCGH
is parent organization of: iChip
is parent organization of: TurboNorm
is parent organization of: Ringo
is parent organization of: RLMM
is parent organization of: charm
is parent organization of: BiSeq
is parent organization of: MEDME
is parent organization of: MEDIPS
is parent organization of: BayesPeak
is parent organization of: ChIPseqR
is parent organization of: Rolexa
is parent organization of: cn.mops
is parent organization of: RankProd
is parent organization of: phyloseq
is parent organization of: HiTC
is parent organization of: CancerMutationAnalysis
is parent organization of: aCGH
is parent organization of: Repitools
is parent organization of: flowPeaks
is parent organization of: Mfuzz
is parent organization of: les
is parent organization of: OLIN
is parent organization of: affylmGUI
is parent organization of: CYCLE
is parent organization of: r3Cseq
is parent organization of: Piano
is parent organization of: RamiGO
hosts: DESeq
hosts: rGADEM
hosts: PICS
hosts: Jmosaics
hosts: R453Plus1Toolbox
hosts: BAC
hosts: targetscan.Hs.eg.db
hosts: Starr
hosts: Qvalue
hosts: topGO
hosts: MmPalateMiRNA
hosts: CGHcall
hosts: EGSEA
hosts: NOISeq
Catt Family Foundation ;
Dana Farber Cancer Institute ;
NHGRI R33 HG002708
PMID:15461798 Free, Freely available OMICS_01759, nif-0000-10445 SCR_006442 SciCrunch Registry 2026-11-07 12:03:36 24163
ANALYZE
 
Resource Report
Resource Website
1000+ mentions
ANALYZE (RRID:SCR_009120) ANALYZE software application, software resource A set of useful accessory programs to the LINKAGE package. It simplifies the performance of a large array of parametric and nonparametric tests for linkage and association on data entered in LINKAGE format pedigree and parameter files. (entry from Genetic Analysis Software) gene, genetic, genomic, pascal, unix, sunos, solaris, osf1 is listed by: Genetic Analysis Software
is listed by: SoftCite
nlx_154223 SCR_009120 SciCrunch Registry 2026-11-07 12:03:43 1119
QUANTO
 
Resource Report
Resource Website
500+ mentions
QUANTO (RRID:SCR_009084) QUANTO software application, software resource Software program that computes sample size or power for association studies of genes, environmental factors, gene-environment interaction, or gene-gene interaction. Available study designs for a disease (binary) outcome include the unmatched case-control, matched case-control, case-sibling, case-parent, and case-only designs. Study designs for a quantitative tra it include independent individuals and case parent designs. Quanto is a 32-bit Windows application requiring Windows 95, 98, NT, 2000, ME or XP to run. The graphical user interface allows th e user to easily change the model and view the results without having to edit an input file and rerun the program for every model. The results of a session are stored to a log file. This log can be printed or saved to a file for reviewing at a later date. An option is included to create a text file of the log that can be imported into other documents. (entry from Genetic Analysis Software) gene, genetic, genomic, c++, ms-windows, (98/nt/2000/..) is listed by: Genetic Analysis Software
is listed by: SoftCite
nlx_154095 SCR_009084 SciCrunch Registry 2026-11-07 12:03:40 927
Openlab
 
Resource Report
Resource Website
1000+ mentions
Openlab (RRID:SCR_012158) Openlab commercial organization, software resource A software package for performing 2D microscope image processing and integrating and controlling a diverse array of instrumentation in a laboratory environment. The software suite has four basic areas of operation acquisition, image presentation, and storage, analysis, and automation., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. fluorescence imaging, cell biology is listed by: SoftCite THIS RESOURCE IS NO LONGER IN SERVICE rid_000096 SCR_012158 SciCrunch Registry 2026-11-07 12:05:04 1134
MutationAssessor
 
Resource Report
Resource Website
500+ mentions
MutationAssessor (RRID:SCR_005762) mutationassessor.org analysis service resource, data analysis service, production service resource, service resource A web server that predicts the functional impact of amino-acid substitutions in proteins, such as mutations discovered in cancer or nonsynonymous polymorphisms. The functional impact is assessed based on evolutionary conservation of the affected amino acid in protein homologs. The method has been validated on a large set (51k) of disease associated (OMIM) and polymorphic variants., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. cancer, protein, mutation, function, amino-acid, substitution is listed by: OMICtools
is listed by: SoftCite
PMID:21727090 THIS RESOURCE IS NO LONGER IN SERVICE OMICS_00134, nlx_149228 SCR_005762 SciCrunch Registry MutationAssessor - functional impact of protein mutations, MutationAssessor - functional impact of mutations, mutationassessor.org - functional impact of protein mutations 2026-11-07 12:02:10 693
mitopred
 
Resource Report
Resource Website
1+ mentions
mitopred (RRID:SCR_006135) MITOPRED analysis service resource, data analysis service, production service resource, service resource THIS RESOURCE IS NO LONGER IN SERVICE, documented on July 16, 2013. It predicts nuclear-encoded mitochondrial proteins from all eukaryotic species including plants. Prediction is based on the occurrence patterns of Pfam domains (version 16.0) in different cellular locations, amino acid composition and pI value differences between mitochondrial and non-mitochondrial locations. Additionally, you may download MITOPRED predictions for complete proteomes. Re-calculated predictions are instantly accessible for proteomes of Saccharomyces cerevisiae, Caenorhabditis elegans, Drosophila, Homo sapiens, Mus musculus and Arabidopsis species as well as all the eukaryotic sequences in the Swiss-Prot and TrEMBL databases. Queries, at different confidence levels, can be made through four distinct options: (i) entering Swiss-Prot/TrEMBL accession numbers; (ii) uploading a local file with such accession numbers; (iii) entering protein sequences; (iv) uploading a local file containing protein sequences in FASTA format. The Mitopred algorithm works based on the differences in the Pfam domain occurrence patters and amino acid composition differences in different cellular compartments. Location specific Pfam domains have been determined from the entire eukaryotic set of Swissprot database. Similarly, differences in the amino acid composition between mitochondrial and non-mitochondrial sequences were pre-calculated. This information is used to calculate location-specific amino acid weights that are used to calculate amino acid score. Similarly, pI average values of the N-terminal 25 residues in different cellular location were also determined. This knowledge-base is accessed by the program during execution. yeast, c. elegans, drosophila, mouse, human, arabidopsis, bio.tools is listed by: Debian
is listed by: bio.tools
is listed by: SoftCite
has parent organization: University at Albany; New York; USA
THIS RESOURCE IS NO LONGER IN SERVICE biotools:mitopred, nif-0000-03956, BioTools:mitopred https://bio.tools/mitopred, https://bio.tools/mitopred, https://bio.tools/mitopred SCR_006135 SciCrunch Registry A genome-scale method for predicting mitochondrial proteins 2026-11-07 12:02:39 7
riskRegression
 
Resource Report
Resource Website
10+ mentions
riskRegression (RRID:SCR_024424) software resource, software toolkit Software R package provides risk regression models and prediction scores for survival analysis with competing risks. risk prediction, risk regression models, prediction scores, survival analysis, competing risks, is listed by: SoftCite Free, Available for download, Freely available https://github.com/tagteam/riskRegression SCR_024424 SciCrunch Registry 2026-11-07 12:01:52 15
RapGreen
 
Resource Report
Resource Website
1+ mentions
RapGreen (RRID:SCR_024426) PMID:34568824 software resource, software toolkit Software phylogenetic tree analysis package. Phylogenetic tree management, exploration and display package. Phylogenetic tree management, phylogenetic tree analysis, is listed by: SoftCite Free, Available for download, Freely available https://github.com/SouthGreenPlatform/rap-green/wiki, http://southgreenplatform.github.io/rap-green/ SCR_024426 SciCrunch Registry 2026-11-07 12:02:10 1
ROCit
 
Resource Report
Resource Website
1+ mentions
ROCit (RRID:SCR_024420) software resource, software toolkit Software R package for assessing overall diagnostic ability of binary classifier. Used to evaluate threshold bound metrics, construct confidence interval of ROC curve and AUC, construct empirical gains table, visualize ROC curve, visualize KS plot, visualize lift plot. assessing overall diagnostic ability of binary classifier, evaluate threshold bound metrics, construct confidence interval of ROC curve and AUC, construct empirical gains table, visualize ROC curve, visualize KS plot, visualize lift plot, is listed by: SoftCite Free, Available for download, Freely available SCR_024420 SciCrunch Registry Receiver Operating Characteristic it 2026-11-07 12:01:59 1
Rgdal
 
Resource Report
Resource Website
1+ mentions
Rgdal (RRID:SCR_024422) software resource, software toolkit Software R package provides bindings for the Geospatial Data Abstraction Library. Translator library for raster and vector geospatial data formats. Translator library, geospatial data formats, Geospatial Data Abstraction Library bindings, is listed by: SoftCite Free, Available for download, Freely available https://r-forge.r-project.org/projects/rgdal/ SCR_024422 SciCrunch Registry , R geospatial data abstraction library, rgdal 2026-11-07 12:01:51 6
survivalROC
 
Resource Report
Resource Website
10+ mentions
survivalROC (RRID:SCR_024415) software resource, software toolkit Software R package to compute time dependent Receiver Operating Characteristic curve from censored survival data. compute time dependent Receiver Operating Characteristic curve, censored survival data, is listed by: SoftCite Free, Available for download, Freely available SCR_024415 SciCrunch Registry survival Receiver Operating Characteristic 2026-11-07 12:01:51 23
ggridges
 
Resource Report
Resource Website
1+ mentions
ggridges (RRID:SCR_024511) software resource, software toolkit Software R package enables creation of Ridgeline plots in 'ggplot2' creation of Ridgeline plots in 'ggplot2', is listed by: SoftCite Free, Available for download, Freely available https://github.com/wilkelab/ggridges SCR_024511 SciCrunch Registry 2026-11-07 12:01:52 8
gamm4
 
Resource Report
Resource Website
1+ mentions
gamm4 (RRID:SCR_024507) software resource, software toolkit Software R package to estimate generalized additive mixed models. estimate generalized additive mixed models, is listed by: SoftCite Free, Available for download, Freely available SCR_024507 SciCrunch Registry 2026-11-07 12:01:52 4
Inference of CRISPR Edits
 
Resource Report
Resource Website
100+ mentions
Inference of CRISPR Edits (RRID:SCR_024508) ICE analysis service resource, production service resource, service resource, software resource Software tool that offers analysis of CRISPR editing data. Used for inference of CRISPR edits from Sanger trace data. analysis of CRISPR editing data, CRISPR editing analysis, is listed by: SoftCite PMID:35119294 Free, Freely available https://github.com/synthego-open/ice#ref2 SCR_024508 SciCrunch Registry Synthego Inference of CRISPR Edits 2026-11-07 12:01:52 103
Optimization Toolbox
 
Resource Report
Resource Website
1+ mentions
Optimization Toolbox (RRID:SCR_024486) software resource, software toolkit Software package provides functions for finding parameters that minimize or maximize objectives while satisfying constraints. Toolbox includes solvers for linear programming, mixed integer linear programming, quadratic programming, second order cone programming, nonlinear programming, constrained linear least squares, nonlinear least squares, nonlinear equations. Mathworks, finding parameters, minimize or maximize objectives, linear programming solver, mixed integer linear programming solver, quadratic programming solver, second order cone programming solver, nonlinear programming solver, constrained linear least squares solver, nonlinear least squares solver, nonlinear equations solver, is listed by: SoftCite Restricted SCR_024486 SciCrunch Registry 2026-11-07 12:02:10 1
CopyKAT
 
Resource Report
Resource Website
50+ mentions
CopyKAT (RRID:SCR_024512) software resource, software toolkit Software R package to estimate genomic copy number profiles at average genomic resolution of 5 Mb from read depth in high throughput single cell RNA sequencing data.Used for inference of genomic copy number and subclonal structure of human tumors from high-throughput single cell RNAseq data. Inference of genomic copy number and subclonal structure of human tumors, high throughput single cell RNAseq data, is listed by: SoftCite PMID:33462507 Free, Available for download, Freely available SCR_024512 SciCrunch Registry , Copynumber Karyotyping of Aneuploid Tumors 2026-11-07 12:01:52 84
classInt
 
Resource Report
Resource Website
1+ mentions
classInt (RRID:SCR_024515) software resource, software toolkit Software R package for choosing univariate class intervals for mapping or other graphics purposes. choosing univariate class intervals, is listed by: SoftCite Free, Available for download, Freely available https://github.com/r-spatial/classInt/ SCR_024515 SciCrunch Registry Class Intervals 2026-11-07 12:02:00 2
mitml
 
Resource Report
Resource Website
1+ mentions
mitml (RRID:SCR_024516) software resource, software toolkit Software R package for multiple imputation of missing data in multilevel modeling. multiple imputation of missing data in multilevel modeling, is listed by: SoftCite Free, Available for download, Freely available https://github.com/simongrund1/mitml SCR_024516 SciCrunch Registry 2026-11-07 12:01:52 1
BLASTP
 
Resource Report
Resource Website
100+ mentions
BLASTP (RRID:SCR_001010) analysis service resource, data analysis service, production service resource, service resource Data analysis service whose programs search protein databases using a protein query. The algorithms used include blastp, psi-blast, phi-blast, and delta-blast. blast, basic local alignment search tool, protein alignment, protein blast, data analysis service, protein is used by: Open Reading Frame Finder
is listed by: OMICtools
is listed by: SoftCite
has parent organization: NCBI
Freely available, Acknowledgement requested OMICS_00991 SCR_001010 SciCrunch Registry blastp suite, Standard Protein BLAST 2026-11-07 12:01:55 293

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