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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
National Geophysical Data Center
 
Resource Report
Resource Website
10+ mentions
National Geophysical Data Center (RRID:SCR_009429) NGDC data or information resource, organization portal, portal, service resource National Data Center that provides scientific stewardship, products, and services for geophysical data from sea floor and solid earth environments, including Earth observations from space. Please note that routine underway geophyiscal shipboard data collected with standard equipment aboard the UNOLS fleet (e.g. bathymetry, subbottom, magnetics, gravity) are routinely transmitted to NGDC via Rolling Deck to Repository (R2R). geophysics, sea floor, solid earth, bathymetry, subbottom, magnetics, gravity is listed by: CINERGI
has parent organization: National Oceanic and Atmospheric Administration
nlx_154716 SCR_009429 SciCrunch Registry 2026-10-31 12:15:02 46
UK Data Service
 
Resource Report
Resource Website
UK Data Service (RRID:SCR_028844) UKDS data or information resource, data repository, service resource, storage service resource Principal repository for economic, population, and social research data in the UK. As hosts of the largest trusted digital archive of its kind, our expertise in the collection, preservation, and dissemination of quality data is the culmination of nearly sixty years of sustained investment by the Economic and Social Research Council (ESRC) in the UK’s research data infrastructure. Social Sciences, UK, Data, Humanities, Economics ESRC Free, Freely available https://doi.org/10.17616/R3230F, https://ror.org/0468x4e75, https://isni.org/isni/0000000494504700, https://doi.org/10.25504/FAIRsharing.1ky0cs SCR_028844 SciCrunch Registry 2026-10-31 12:25:06 0
Biological Magnetic Resonance Data Bank (BMRB)
 
Resource Report
Resource Website
500+ mentions
Biological Magnetic Resonance Data Bank (BMRB) (RRID:SCR_002296) BioMagResBank, BMRB data or information resource, data repository, database, service resource, storage service resource Public depository that collects, annotates, archives, and disseminates important spectral and quantitative data derived from nuclear magnetic resonance spectroscopic investigations of biological macromolecules and metabolites. Provides reference information and maintains a collection of NMR pulse sequences and computer software for biomolecular NMR. magnetic resonance, data bank, depository, database, data repository, spectral data, quantitative data, nmr, spectroscopy, macromolecule, metabolite, metabolomics, FASEB list is recommended by: NIDDK Information Network (dkNET)
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
is listed by: DataCite
is listed by: 3DVC
is listed by: re3data.org
is related to: Worldwide Protein Data Bank (wwPDB)
is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
is related to: Nucleic Acid Database
is related to: DNA DataBank of Japan (DDBJ)
is related to: PDBe - Protein Data Bank in Europe
is related to: NRG-CING
is related to: Worldwide Protein Data Bank (wwPDB)
is related to: PDBj - Protein Data Bank Japan
is related to: CCPN Data Model
has parent organization: University of Wisconsin-Madison; Wisconsin; USA
is parent organization of: NMR Restraints Grid
NLM LM05799 PMID:18288446
PMID:17984079
PMID:12766409
PMID:36478084
Free, Freely available r3d100010191, nif-0000-21058 SCR_002296 SciCrunch Registry BMRB, BioMagResBank, Biological Magnetic Resonance DataBank, BioMag Res Bank 2026-10-31 12:13:04 790
Coherent X-Ray Imaging Data Bank (CXIDB)
 
Resource Report
Resource Website
10+ mentions
Coherent X-Ray Imaging Data Bank (CXIDB) (RRID:SCR_014722) CXIDB data or information resource, data repository, database, service resource, storage service resource Database of Coherent X-ray Imaging (CXI) experiments. This data is widely accessible to researchers worldwide. coherent xray imaging, cxi, experiment, database, reproducibility uses: DataCite
is recommended by: NIDDK Information Network (dkNET)
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
Available to the research community DOI:10.11577, r3d100011554 https://doi.org/10.11577/, https://dx.doi.org/10.11577/ SCR_014722 SciCrunch Registry Coherent X-ray Imaging Data Bank (CXIDB), CXIDB, Coherent X-ray Imaging Data Bank 2026-10-31 12:16:17 23
Aston Data Explorer
 
Resource Report
Resource Website
100+ mentions
Aston Data Explorer (RRID:SCR_023132) data repository, service resource, storage service resource Aston University's repository for their research data. It is one of three services providing information about Aston University�s research. Aston Publications Explorer holds Aston's research publications and Aston Research Explorer has broader information about Aston's research work including research staff, awards and activities, projects and research groups.Metadata will be accessible to anyone free of charge. The metadata may be re-used in any medium without prior permission and re-sold commercially provided the repository is mentioned.Aston�s repository holds datasets and corresponding metadata that have been produced by Aston University staff and students. The datasets deposited in Aston Publications Explorer range from metadata records only through to full datasets. Content is the sole responsibility of the authors, and any questions over content should be directed to them.Aston Data Explorer, Aston Publications Explorer AND Aston Research Explorer allow users to re-use full-text and other full-data items under the terms of the Creative Commons Attribution Non-Commercial No Derivatives (CC BY NC ND) licence. This means that users must give appropriate credit to the authors and link to the licence. Users may not re-use the material for commercial purposes. Users cannot distribute material that has been remixed, transformed or built upon the original published output. Where a full-text or other full-data item has a licence that is more restrictive or permissive than the CC BY NC ND default licence, this licence should be adhered to. is listed by: DataCite
is listed by: re3data.org
Free, Freely available r3d100012285, DOI:10.17616/R3H073, DOI:10.17036 https://doi.org/10.17036, https://dx.doi.org/10.17036, http://doi.org/10.17616/R3H073, https://doi.org/10.17616/R3H073 SCR_023132 SciCrunch Registry Aston Data Explorer 2026-10-31 12:18:46 146
fMRI Data Center
 
Resource Report
Resource Website
10+ mentions
fMRI Data Center (RRID:SCR_007278) fMRIDC data or information resource, data repository, database, service resource, storage service resource THIS RESOURCE IS NO LONGER IN SERVICE, documented August 25, 2013 Public curated repository of peer reviewed fMRI studies and their underlying data. This Web-accessible database has data mining capabilities and the means to deliver requested data to the user (via Web, CD, or digital tape). Datasets available: 107 NOTE: The fMRIDC is down temporarily while it moves to a new home at UCLA. Check back again in late Jan 2013! The goal of the Center is to help speed the progress and the understanding of cognitive processes and the neural substrates that underlie them by: * Providing a publicly accessible repository of peer-reviewed fMRI studies. * Providing all data necessary to interpret, analyze, and replicate these fMRI studies. * Provide training for both the academic and professional communities. The Center will accept data from those researchers who are publishing fMRI imaging articles in peer-reviewed journals. The goal is to serve the entire fMRI community. fmri, cognitive, cortex, mri, talairach, neuroimaging, cognitive neuroscience, brain, structure, function, magnetic resonance, intellect, image collection, data set is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is listed by: Biositemaps
is listed by: re3data.org
has parent organization: University of California at Santa Barbara; California; USA
NSF ;
W. M. Keck Foundation ;
NIMH ;
Sun Microsystems Center of Excellence
PMID:11545705 THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-00025 http://www.fmridc.org/ SCR_007278 SciCrunch Registry The fMRI Data Center 2026-10-31 12:14:35 16
An Open Access On-Line Breast Cancer Mutation Data Base
 
Resource Report
Resource Website
100+ mentions
An Open Access On-Line Breast Cancer Mutation Data Base (RRID:SCR_008432) data or information resource, database When the BRCA1 gene was cloned, a Steering Committee was initiated to help coordinate the formation of a Breast Cancer Information Core (BIC) that could act as such a central repository. NHGRI has chosen as the most accessible format for the BIC this World Wide Web site. The recent identification of mutations in breast cancer susceptibility genes has provided the exciting opportunity to help identify women who are at high risk to develop breast cancer. One of the serious impediments to achieving clinical benefits from this information however, is finding and assessing the significance of mutations in these new susceptibility genes. It is imperative that the detection and interpretation of these mutations is coordinated and that this information is made available to as many qualified investigators as possible. There are many sites on the web that contain general as well as scientific information relevant to breast cancer. A partial list of these can be found here. Having participated in the poorly coordinated analysis of other cancer susceptibility genes, we consider it important to create and maintain a central repository for information regarding mutations and polymorphisms. NHGRI also think it critical to make available the reagents necessary to carry out many different techniques for the detection of such mutations. Sponsors: This resource is supported by the National Human Genome Research Institute (NHGRI). Keywords: Breast, Cancer, Mutation, Clincial, Polymorphism, Gene, Scientific, FASEB list has parent organization: National Human Genome Research Institute nif-0000-30219 SCR_008432 SciCrunch Registry Breast Cancer Information Core 2026-10-31 12:20:34 143
Child Language Data Exchange System (CHILDES)
 
Resource Report
Resource Website
50+ mentions
Child Language Data Exchange System (CHILDES) (RRID:SCR_003241) CHILDES data or information resource, data repository, database, service resource, software resource, storage service resource Child language component of TalkBank system. TalkBank is system for sharing and studying conversational interactions. Includes software developed for speech recognition and analysis as well as behavior recognition. Database contains transcript and media data collected from conversations between young children and their playmates and caretakers. Conversations with older children and adults are available from TalkBank. All of data is transcribed in CHAT and CA/CHAT formats. Child, language, conversation, interaction, data, psychology, survey, transcript is recommended by: National Library of Medicine
has parent organization: Carnegie Mellon University; Pennsylvania; USA
works with: TalkBank
NICHD R01 HD051698;
NICHD R01 HD23998
PMID:2380278 Free, Freely available nif-0000-00624, r3d100010887 https://doi.org/10.17616/R3M31S http://childes.psy.cmu.edu SCR_003241 SciCrunch Registry Child Language Data Exchange System 2026-10-31 12:13:20 52
U.S. Antarctic Program Data Coordination Center
 
Resource Report
Resource Website
1+ mentions
U.S. Antarctic Program Data Coordination Center (RRID:SCR_002221) USAP-DCC data or information resource, data repository, database, service resource, storage service resource Assists scientists in finding Antarctic scientific data of interest and submitting data for long-term preservation in accordance with their obligations under the National Science Foundation (NSF) Office of Polar Programs (OPP) Data Policy. antarctica, southern ocean, polar is listed by: CINERGI
has parent organization: Marine Geoscience Data System
NSF Free, Freely available r3d100010660, nlx_154744 https://doi.org/10.17616/R31898 http://www.usap-data.org/ SCR_002221 SciCrunch Registry 2026-10-31 12:13:03 6
National Oceanographic Data Center
 
Resource Report
Resource Website
10+ mentions
National Oceanographic Data Center (RRID:SCR_002189) NODC data or information resource, data repository, database, service resource, storage service resource Accepts and provides access to biology data, buoy data, chlorophyll, nutrients, ocean currents, oxygen, plankton, profile data, salinity, satellite data, sea level, snow and ice, temperature, waves. Please note that routine underway oceanographic shipboard data collected with standard equipment aboard the UNOLS fleet (e.g. CTD, ADCP, XBT, MET, TSG) are routinely transmitted to NODC via Rolling Deck to Repository (R2R). NODC Provides: * The World's largest collection of freely available oceanographic data * Water temperatures dating back to the late 1700's and measuring thousands of meters deep * A State of the Ocean Climate from NODC's Ocean Climate Lab and Satellite Team's scientific analyses * Scientific journals, rare books, historical photo collections and maps through the NOAA Central Library, a division of NODC * Data management expertise including metadata training through NODC's National Coastal Data Development Center oceanographic data, water temperature, ocean climate, marine, ocean is listed by: CINERGI
has parent organization: National Oceanic and Atmospheric Administration
U.S. Department of Commerce Free, Freely available nlx_154699 SCR_002189 SciCrunch Registry National Oceanographic Data Center (NODC) 2026-10-31 12:13:02 31
G Protein-Coupled Receptor Data Base
 
Resource Report
Resource Website
100+ mentions
G Protein-Coupled Receptor Data Base (RRID:SCR_007419) data or information resource, data repository, database, service resource, software resource, storage service resource The GPCRDB is a molecular-class information system that collects, combines, validates and stores large amounts of heterogenous data on G protein-coupled receptors (GPCRs). :The GPCRDB contains data on sequences, ligand binding constants and mutations. In addition, t he system provides computationally derived data such as multiple sequence alignments, homology models, and a series of query and visualization tools. :The GPCRDB is designed to be a data storage medium, as well as a tool to aid biomedical scientists with answering questions by offering a single point of access to many types of data that are integrated and visualized in a user-friendly way. Although most parts of the GPCRDB are self-explanatory, if you have not used this resource before it is adviced that you to take a look at the usage page. Sponsors: This resource is supported by Organon and Unilever, and the NIH. Keywords: G protein, Coupled, receptor, Molecular, Heterogenous, Data, Sequence, Ligand, Mutation, Computational, Software, Alignment, Homology, Model, Visualization, Tool, Biomedical, Scientist, Integration, FASEB list has parent organization: Radboud University; Nijmegen; The Netherlands nif-0000-00521 http://www.gpcr.org/7tm/ SCR_007419 SciCrunch Registry GPCRDB 2026-10-31 12:14:45 206
PDBj - Protein Data Bank Japan
 
Resource Report
Resource Website
10+ mentions
PDBj - Protein Data Bank Japan (RRID:SCR_008912) PDBj data or information resource, data repository, database, service resource, storage service resource PDBj (Protein Data Bank Japan) maintains a centralized PDB archive of macromolecular structures and provides integrated tools, in collaboration with the RCSB, the BMRB in USA and the PDBe in EU. protein, macromolecule, structure, sequence, ligand, binding site, nmr, molecule, gold standard is recommended by: NIDDK Information Network (dkNET)
is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
is related to: Worldwide Protein Data Bank (wwPDB)
is related to: PDBe - Protein Data Bank in Europe
is related to: Biological Magnetic Resonance Data Bank (BMRB)
is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
has parent organization: Osaka University; Osaka; Japan
Japan Science and Technology Agency ;
NBDC - National Bioscience Database Center
PDB data, Text and images are free of all copyright restrictions. You can use them free of charge. When you reprint or cite them, Please also cite us as follows: Protein Data Bank Japan (PDBj) Please also see Terms of Use page. nlx_151484, r3d100010910 https://doi.org/10.17616/R3RP75, https://doi.org/10.17616/R3RP75 SCR_008912 SciCrunch Registry PDBj, Protein Data Bank Japan 2026-10-31 12:14:55 46
G-node portal electrophysiology data sharing
 
Resource Report
Resource Website
1+ mentions
G-node portal electrophysiology data sharing (RRID:SCR_008893) data or information resource, data repository, service resource, storage service resource Platform for sharing data, with very large storage capability for electrophysiological data, EEG data is included. This service is provided for neuroscientists to facilitate data access, data storage, data analysis and data sharing. This service is developed and maintained by the German Node of the International Neuroinformatics Coordinating Facility. The global scale of neuroinformatics offers unprecedented opportunities for scientific collaborations between and among experimental and theoretical neuroscientists. To fully harvest these possibilities, coordinated activities are required to improve key ingredients of neuroscience: data access, data storage, and data analysis, together with supporting activities for teaching and training. Focusing on the development and free distribution of tools for handling and analyzing neurophysiological data, G-Node aims at addressing these aspects as part of the International Neuroinformatics Coordination Facility (INCF) and the German Bernstein Network for Computational Neuroscience (NNCN). G-Node also serves as an international forum for Computational Neuroscientists that are interested in sharing experimental data and tools for data analysis and modeling. G-Node is funded through the German Federal Ministry of Education and Research and hosted by Ludwig-Maximilians-Universit-Munchen. neuroinformatics, electrophysiology, data, eeg, odml metadata language, api, neuroshare, data sharing, neurophysiology is listed by: 3DVC
has parent organization: German Neuroinformatics Node (G-Node)
BMBF PMID:18653312 nlx_151375 https://portal.g-node.org/data SCR_008893 SciCrunch Registry 2026-10-31 12:15:01 2
National Geothermal Data System
 
Resource Report
Resource Website
1+ mentions
National Geothermal Data System (RRID:SCR_006545) NGDS data or information resource, data repository, database, service resource, storage service resource Database of information resources on geothermal energy from a national network of data providers. Data are contributed by academic researchers, private sector participants, and state and federal agencies, primarily the Department of Energy. Access, view, and download data with this free and easy online search tool. geothermal is listed by: CINERGI DOE award DE-EE0001120 Free nlx_155574, r3d100011016 https://doi.org/10.17616/R37902 SCR_006545 SciCrunch Registry 2026-10-31 12:14:25 1
Integrated Earth Data Applications
 
Resource Report
Resource Website
1+ mentions
Integrated Earth Data Applications (RRID:SCR_006739) IEDA analysis service resource, data analysis service, data or information resource, data repository, database, production service resource, service resource, storage service resource A community-based data facility to support, sustain, and advance the geosciences by providing data services for observational solid earth data from the Ocean, Earth, and Polar Sciences. IEDA systems enable these data to be discovered and reused by a diverse community now and in the future. Data services include data access, data analysis, data compliance, data publication, DOI search, and web services. Desktop apps GeoMapApp and Virtual Ocean are available to explore, visualize and analyze your own data within the context of hundreds of other earth science data from around the world. IEDA is a partnership between EarthChem and the Marine Geoscience Data System (MGDS). EarthChem and MGDS systems include the geochemical databases PetDB and SedDB, the geochemistry data network EarthChem, the Ridge2000 and MARGINS Data Portals, the Academic Seismic Portal field data collection, the Antarctic and Southern Ocean Data System, the Global Multi Resolution Topography synthesis, and the System for Earth Sample Registration SESAR. map, ocean, earth, polar, sciences, ocean sciences, earth sciences, polar sciences, doi, global geochemistry, marine geoscience has parent organization: Columbia University; New York; USA
is parent organization of: Marine Geoscience Data System
is parent organization of: Global-Multi Resolution Topography Image Service
is parent organization of: Global-Multi Resolution Topography Grid Service
NSF The community can contribute to this resource, Free, Open unspecified license nlx_156096 SCR_006739 SciCrunch Registry 2026-10-31 12:14:35 1
National Climatic Data Center
 
Resource Report
Resource Website
100+ mentions
National Climatic Data Center (RRID:SCR_009427) NCDC data or information resource, data repository, database, service resource, storage service resource National Data Center that accepts and makes available weather, climate, paleoclimate, meteorological data. weather, climate, paleoclimate, meteorology, FASEB list is listed by: CINERGI
has parent organization: National Oceanic and Atmospheric Administration
is parent organization of: World Data Center for Paleoclimatology
nlx_154702 SCR_009427 SciCrunch Registry 2026-10-31 12:14:57 135
Archive of Data on Disability to Enable Policy (ADDEP)
 
Resource Report
Resource Website
Archive of Data on Disability to Enable Policy (ADDEP) (RRID:SCR_016315) ADDEP data or information resource, data repository, service resource, storage service resource Provides access to data including wide range of topics related to disability. ADDEP data can be used to better understand and inform the implementation of Americans with Disabilities Act and other disability policies. Data, access, disability is recommended by: National Library of Medicine NIBIB ;
NICHD ;
NINDS
SCR_016315 SciCrunch Registry Archive of Data on Disability to Enable Policy 2026-10-31 12:16:42 0
Australian Data Archive
 
Resource Report
Resource Website
1+ mentions
Australian Data Archive (RRID:SCR_014706) data repository, service resource, storage service resource A consortium of leading national Australian universities which collects and preserves digital research data and makes these data available for secondary analysis. The consortium provides a data catalogue comprised of seven sub-archives: Social Science, HIstorical, Indigenous, Longitudinal, Qualitative, Crime and Justice, and International. All users can browse and search the catalogue, view study and variable documentation, and download related material. Registered users can also analyze and visualize most data online and users who have completed the relevant undertaking form(s) can download entire studies or subsets of variables. Deposited data are processed, reviewed, and published for research use. data archive, data catalogue, australia, digital research data is listed by: DataCite
is listed by: re3data.org
is listed by: FAIRsharing
Available to the research community DOI:10.26193, DOI:10.17616/R3DS3K, DOI:10.25504/FAIRsharing.sN8d9i https://doi.org/10.26193, https://dx.doi.org/10.26193, http://doi.org/10.17616/R3DS3K, https://fairsharing.org/10.25504/FAIRsharing.sN8d9i SCR_014706 SciCrunch Registry 2026-10-31 12:16:16 9
CCPN Data Model
 
Resource Report
Resource Website
CCPN Data Model (RRID:SCR_016982) data or information resource, data processing software, data repository, data storage software, database, service resource, software application, software resource, storage service resource Model to cover data for macromolecular NMR spectroscopy from the initial experimental data to the final validation. Used for the large scale data deposition, data mining and program interoperability. Enables movement from one software package to another without difficulties with data conversion or loss of information. Works with CcpNmr Analysis software for analysis and interactive display, CcpNmr FormatConverter for allowing transfer of data from programs used in NMR to and from the Data Model, and the CLOUDS software for automated structure calculation and assignment. Used within the CCPN software suite for NMR spectroscopy and at the BioMagResBank for converting existing deposited restraint lists to a standard IUPAC nomenclature. data, macromolecular, NMR, spectroscopy, deposition, mining, interoperability, conversion is related to: Biological Magnetic Resonance Data Bank (BMRB)
has parent organization: Collaborative Computing Project for NMR
works with: CCPN Analysis
works with: CCPN Analysis
BBSRC ;
EU ;
NIGMS GM67965;
NLM P41 LM005799
PMID:15815974
PMID:15613391
PMID:21953355
Free, Public SCR_016982 SciCrunch Registry The CCPN Data Model 2026-10-31 12:16:44 0
Ascidian Network for InSitu Expression and Embryological Data
 
Resource Report
Resource Website
50+ mentions
Ascidian Network for InSitu Expression and Embryological Data (RRID:SCR_013030) ANISEED data or information resource, data repository, database, service resource, software resource, storage service resource Database of ascidian embryonic development at the level of the genome (cis-regulatory sequences, gene expression, protein annotation), of the cell (morphology, fate, induction, lineage) or of the whole embryo (anatomy, morphogenesis). Currently, four organism models are described in Aniseed: Ciona intestinalis, Ciona savignyi, Halocynthia roretzi and Phallusia mammillata.
This version supports four sets of Ciona intestinalis transcript models: JGI v1.0, KyotoGrail 2005, KH and ENSEMBL, all functionally annotated, and grouped into Aniseedv3.0 gene models. Users can explore their expression profiles during normal or manipulated development, access validated cis-regulatory regions, get the molecular tools used to assay gene function, or all articles related to the function, or regulation of a given gene. Known transcriptional regulators and targets are listed for each gene, as are the gene regulatory networks acting in individual anatomical territories.
ANISEED is a community tool, and the direct involvement of external contributors is important to optimize the quality of the submitted data. Virtual embryo: The 3D Virtual embryo is available to download in the download section of the website.
embryology, embryo, gene, genome, anatomy, cis-regulatory, development, morphogenesis, morphology, protein, molecular neuroanatomy resource, cis-regulatory sequence, gene expression, protein annotation, cell, expression profile, function, regulation, blast, visualization, data analysis service, clone, FASEB list CNRS ;
French Ministry of Research ;
Marseille-Nice Genopole ;
ARC ;
European Network QLK3-CT-2001-01890
PMID:20647237 nif-0000-10155 http://crfb.univ-mrs.fr/aniseed/index.php SCR_013030 SciCrunch Registry Aniseed database 2026-10-31 12:18:40 63

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