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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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SP Scientific Resource Report Resource Website 1+ mentions |
SP Scientific (RRID:SCR_017367) | material resource, instrument supplier | Commercial organization located in Warminster, Pennsylvania, USA, part of SP Industries, Inc. Provides VirTis, FTS Systems, Hotpack, Hull, Genevac, and PennTech scientific equipment. Manufactures freeze drying/lyophilization, centrifugal evaporation and concentration, temperature control/thermal management, glassware washers, controlled environments, vial washing and tray loading machines., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | Manufacturer, commercial, organization, component, laboratory, equipment | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_017367 | 2026-08-03 09:36:36 | 2 | |||||||||||
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Bruker Corporation Resource Report Resource Website 1+ mentions |
Bruker Corporation (RRID:SCR_017365) | material resource, instrument supplier | Commercial organization located in Massachusetts, USA, for scientific instruments and analytical and diagnostic solutions. Bruker equipment can be used in life science molecular research, in applied and pharma applications,microscopy, nano-analysis and industrial applications. Provider of high-performance systems for cell biology, preclinical imaging, clinical phenomics and proteomics research, clinical microbiology, and for molecular pathology research. | Manufacturer, corporation, commercial, instrument, analytical, diagnostic, equipment | SCR_017365 | 2026-08-03 09:37:02 | 3 | ||||||||||||
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Hamamatsu Photonics Resource Report Resource Website 10+ mentions |
Hamamatsu Photonics (RRID:SCR_017105) | material resource, instrument supplier | Manufacturer of optical sensors including, photomultiplier tubes, electric light sources, and other optical devices and their applied instruments for scientific, technical and medical use. | Japanese, manufacturer, optical, sensor, photomultiplier, tube, electric, light, source, optical, device | SCR_017105 | Hamamatsu Photonics K.K. | 2026-08-03 09:36:59 | 18 | |||||||||||
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Olympus Resource Report Resource Website 50+ mentions |
Olympus (RRID:SCR_017564) | material resource, instrument supplier | Japanese manufacturer of optics and reprography products specializing in microscopes and thermometers. | Japanese, manufacturer, optics, reprography, product, microscope, thermometer |
provides: Olympus: FV1000 Confocal Microscope provides: Olympus: FluoView FV3000 Confocal Laser Scanning Microscope provides: FluoView FV10-ASW software provides: Olympus cellSens Software provides: Olympus IX-53 provides: Confocal Microscopy Image Gallery - Rat Brain Tissue Sections provides: Olympus Cell Software provides: AnalySIS FIVE software provides: Olympus FV1200 provides: Olympus MicroSuite Five |
SCR_017564 | 2026-08-03 09:37:04 | 51 | |||||||||||
|
MagVenture Resource Report Resource Website 1+ mentions |
MagVenture (RRID:SCR_017563) | material resource, instrument supplier | Danish, privately owned company specializing in non-invasive stimulation systems for treatment of major depressive disorder and neuroscience research based on use of transcranial magnetic stimulation. | Danish, company, non invasive, stimulation, system, depressive, disorder, neuroscience, transcranial, magnetic, stimulation | provides: MagVenture: MagPro Magnetic Stimulator | SCR_017563 | 2026-08-03 09:36:40 | 1 | |||||||||||
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MindWare Technologies Resource Report Resource Website 10+ mentions |
MindWare Technologies (RRID:SCR_016972) | material resource, instrument supplier | Commercial organization providing laboratory solutions in the fields of psychophysiology, neuroscience, social science, life science, child and behavioral development. Offers a wide array of products and services including signal acquisition hardware used to collect a variety of measures including Cardiac Impedance, HRV, GSR/GSC, ECG/EKG, HR, BP, and EMG supplemented with software suite of analysis applications. | Commercial, organization, laboratory, product, service, signal, acquisition, hardware, software | SCR_016972 | MindWare Technologies Ltd. | 2026-08-03 09:36:40 | 13 | |||||||||||
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Open Science Framework Resource Report Resource Website 500+ mentions |
Open Science Framework (RRID:SCR_003238) | OSF | storage service resource, data repository, service resource | Platform to support research and enable collaboration. Used to discover projects, data, materials, and collaborators helpful to your own research. | workflow, cloud, data management, provenance, network, collaboration, data sharing, interdisciplinary research, FASEB list |
is used by: NIH Heal Project is listed by: re3data.org is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: DataCite is listed by: FAIRsharing has parent organization: Center for Open Science |
Free, Freely available | DOI:10.25504/FAIRsharing.g4z879, DOI:10.17605, nlx_157292, DOI:10.17616/R3N03T, r3d100011268, SCR_017419 | http://openscienceframework.org, https://doi.org/10.17616/R3N03T, https://doi.org/10.17616/r3n03t, https://doi.org/10.17605/, https://dx.doi.org/10.17605/, https://fairsharing.org/10.25504/FAIRsharing.g4z879, https://doi.org/10.17616/R35G9K | SCR_003238 | 2026-08-04 09:40:51 | 741 | |||||||
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Academic Karma Resource Report Resource Website 1+ mentions |
Academic Karma (RRID:SCR_014017) | production service resource, service resource | A peer review management system which encourages timely and high quality peer review by using a credit system. Reviewers complete reviews using a general webform on academickarma.org, and if that review is submited to an editor within ten days, the reviewer is awarded a certain amount of points (karma credits). The author and editor both receive the review. Editors can use Academic Karma to identify specialized reviewers for future reference. A reviewer's personal profile, which includes the amount of karma credits they've received, is connected to their ORCID account and publication record for an overview of the reviewer's work. | peer review, peer review management, service resource, prodution service resource |
uses: ORCID - Open Researcher and Contributor ID is listed by: Connected Researchers is related to: Connected Researchers is related to: ORCID - Open Researcher and Contributor ID |
Free, Available to the research community | SCR_014017 | 2026-08-04 09:43:19 | 1 | ||||||||||
|
RAST Server Resource Report Resource Website 500+ mentions |
RAST Server (RRID:SCR_014606) | RAST | production service resource, service resource | A SEED-quality automated service that annotates complete or nearly complete bacterial and archaeal genomes across the entire phylogenetic tree. RAST can also be used to analyze draft genomes. | microbiome, seed, annotate, genome, bacteria, archaea, service, bio.tools |
is listed by: Human Microbiome Project is listed by: Debian is listed by: bio.tools |
National Science Foundation 0850546; NIAID contract HHSN272200900040C |
PMID:18261238 | Free for the scientific community, Login required | biotools:theseed | https://bio.tools/theseed | SCR_014606 | Rapid Annotation using Subsystem Technology, Rapid Annotation using Subsystem Technology Server | 2026-08-04 09:43:29 | 907 | ||||
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Johns Hopkins Research Data Repository Resource Report Resource Website 1+ mentions |
Johns Hopkins Research Data Repository (RRID:SCR_014728) | storage service resource, data repository, service resource | Open access repository for Johns Hopkins University researchers to share their research data. Data repository is administered by professional curators at JHU Data Services, who will work with depositors to enable future discovery and reuse of your data, and ensure your data is Findable, Accessible, Interoperable and Reusable (FAIR). Each dataset has citation and DOI, facilitating attribution, and connection to research publications. | FAIR, data collection, data set, public data, education, training, data archive | Free, Freely available | r3d100011836 | https://doi.org/10.17616/R3RW77 | https://archive.data.jhu.edu/dvn/, http://dms.data.jhu.edu/archiving-2/ | SCR_014728 | 2026-08-04 09:43:31 | 5 | ||||||||
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Australian Data Archive Resource Report Resource Website 1+ mentions |
Australian Data Archive (RRID:SCR_014706) | storage service resource, data repository, service resource | A consortium of leading national Australian universities which collects and preserves digital research data and makes these data available for secondary analysis. The consortium provides a data catalogue comprised of seven sub-archives: Social Science, HIstorical, Indigenous, Longitudinal, Qualitative, Crime and Justice, and International. All users can browse and search the catalogue, view study and variable documentation, and download related material. Registered users can also analyze and visualize most data online and users who have completed the relevant undertaking form(s) can download entire studies or subsets of variables. Deposited data are processed, reviewed, and published for research use. | data archive, data catalogue, australia, digital research data |
is listed by: DataCite is listed by: re3data.org is listed by: FAIRsharing |
Available to the research community | DOI:10.26193, DOI:10.17616/R3DS3K, DOI:10.25504/FAIRsharing.sN8d9i | https://doi.org/10.26193, https://dx.doi.org/10.26193, http://doi.org/10.17616/R3DS3K, https://fairsharing.org/10.25504/FAIRsharing.sN8d9i | SCR_014706 | 2026-08-04 09:43:31 | 7 | ||||||||
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NAPR: Neuroanatomical Age Prediction using R Resource Report Resource Website 1+ mentions |
NAPR: Neuroanatomical Age Prediction using R (RRID:SCR_015759) | NAPR | storage service resource, data repository, service resource | Cloud-based framework that allows users to estimate the age of individual subjects using cortical thickness maps derived from their own locally processed T1-weighted whole brain MRI scans. The provided age prediction models were trained using (i) relevance vector machines and (ii) Gaussian processes machine learning methods applied to cortical thickness surfaces obtained using Freesurfer v5.3. | neuroanatomy, prediction, r, neuroimaging, mri scan, cortical thickness, relevance vector | DOI:10.1101/099309 | Free, Available for download | http://www.cloudneuro.org/ | SCR_015759 | Neuroanatomical Age Prediction using R | 2026-08-04 09:43:44 | 1 | |||||||
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Mayo Clinic Resource Report Resource Website 50+ mentions |
Mayo Clinic (RRID:SCR_011383) | institution | Nonprofit academic medical center focused on integrated clinical practice, education, and research with three major campuses: Rochester, Minnesota; Jacksonville, Florida; and Phoenix/Scottsdale, Arizona. Practice specializes in treating difficult cases through tertiary care and destination medicine. | medical, academic, center, integrated, clinical, practice, cardiovascular, disease, surgery |
uses: Kaggle is related to: Alzheimers Disease Genetics Consortium is related to: Clinical and Translational Science Awards Consortium is related to: Care Connectivity Consortium is parent organization of: Mayo Clinic College of Medicine is parent organization of: Mayo Clinic Florida; Florida; USA is parent organization of: Mayo Clinic Minnesota; Minnesota; USA is parent organization of: SnowsShoes-FTD is parent organization of: Mayo Clinic Center for Cell Signaling in Gastroenterology Clinical Core is parent organization of: Mayo Clinic Center for Cell Signaling in Gastroenterology Gene Editing and Cell Engineering Core is parent organization of: Mayo Clinic Center for Cell Signaling in Gastroenterology is parent organization of: Mayo Clinic Center for Cell Signaling in Gastroenterology Optical Microscopy Core is parent organization of: Mayo Clinic O'Brien Urology Center Urine Phenotyping Core is parent organization of: Mayo Clinic O'Brien Urology Center Imaging Core is parent organization of: Mayo Clinic O'Brien Urology Center is parent organization of: Mayo Clinic O'Brien Urology Center Biostatistics and Epidemiology Core is parent organization of: KnowEnG is parent organization of: Mayo Clinic Rochehster Bioinformatics Core Facility is parent organization of: Sample Size Matters is parent organization of: Mayo Clinic Immunochemical Core Facility is parent organization of: CNVpytor is parent organization of: Mayo Clinic Immune Monitoring Core Facility is parent organization of: Mayo Clinic Medical Genome Core Facility is parent organization of: Mayo Clinic Arizona Flow Cytometry Core Facility is parent organization of: Mayo Clinic Stem Cell and Organoid Core Facility is parent organization of: Mayo Clinic Cytometry and Cell Imaging Core Facility is parent organization of: Mayo Clinic Structural Biology Core Facility is parent organization of: Mayo Clinic Antibody Hybridoma Core Facility is parent organization of: Mayo Clinic Biomedical Imaging Resource Core Facility is parent organization of: Mayo Clinic Precision Mouse Engineering Core Facility is parent organization of: Mayo Clinic Genetic Screening and Engineering Core Facility is parent organization of: Mayo Clinic Genome Analysis Core Facility is parent organization of: Mayo Clinic Arizona Research Histology Care Facility |
GRID grid.66875.3a, Wikidata Q1130172, Crossref Funder ID 100000871, ISNI 0000 0004 0459 167X | https://ror.org/02qp3tb03 | SCR_011383 | 2026-08-04 09:42:50 | 56 | |||||||||
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NeuroLOG Resource Report Resource Website 500+ mentions |
NeuroLOG (RRID:SCR_010582) | knowledge environment, software resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on July 16, 2013. The NeuroLOG consortium is addressing: *Management and access of partly structured data, heterogeneous and distributed in an open environment. *Access control and protection of private medical data. *Control of workflows implied in complex computing process on grid infrastructures. *Extraction and quantification of relevant parameters for different pathologies: Multiple sclerosis, Brain Vascular Stroke, Brain tumors Four application pipelines have been proposed in the context of the project. The pipelines are formalized using the Scufl data flow language. *Multiple Sclerosis image analysis pipelines *Brain Stroke application pipeline (from GIN) *Stroke / tumours Anacom application pipeline (from IFR49) Different softwares developed and/or used in this project are presented., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. |
is related to: OntoNeuroLOG has parent organization: University of Nice Sophia Antipolis; Nice; France |
French National Research Agency contract ANR-06-TLOG-024 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_44086 | SCR_010582 | NeuroLOG Project, NeuroLOG | 2026-08-04 09:42:43 | 546 | ||||||||
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EZID Resource Report Resource Website 1+ mentions |
EZID (RRID:SCR_006473) | EZID | production service resource, service resource | A production service that gives researchers the ability to create and manage long-term identifiers so that they can to track usage, get credit for their work, share their data, and have the data reused for additional research. As a result, EZID identifiers also make it possible to increase citations, to build on previous work, to conduct new research, and avoid duplicating previous efforts. EZID identifiers provide a simple but powerful way to track research materials, including datasets, throughout their life cycle. In this way, researchers can share their data, get more citations, and track their results. | data citation, data management, open citation, digital object identifier |
is listed by: FORCE11 has parent organization: California Digital Library |
Subscription | nlx_156045 | http://www.force11.org/node/4793 | SCR_006473 | easy-eye-dee | 2026-08-04 09:41:36 | 1 | ||||||
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Brain-CODE Resource Report Resource Website 10+ mentions |
Brain-CODE (RRID:SCR_015877) | storage service resource, data repository, service resource | Brain-CODE is a large-scale informatics platform that manages the acquisition and storage of multidimensional data collected from participants with a variety of brain disorders. | informatics, data storage, brain disorder | brain disorder, neurological disorder, informatics platform, data repository, data storage service, neuroscience | Public, Freely available, The research community can contribute to this resource | r3d100012181 | https://doi.org/10.17616/R3CK9G | SCR_015877 | 2026-08-04 09:43:45 | 44 | ||||||||
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PDB-Dev Resource Report Resource Website 10+ mentions |
PDB-Dev (RRID:SCR_016185) | storage service resource, data repository, service resource | Data repository for integrative/hybrid structural models of macromolecules and their assemblies. This includes atomistic models as well as multi-scale models consisting of different coarse-grained representations. | protein, prototype, deposition, integration, hybrid, model, macromolecule, assembly, crystallography, spectroscopy, microscopy, |
is related to: IHM-dictionary has parent organization: Worldwide Protein Data Bank (wwPDB) has parent organization: Rutgers University; New Jersey; USA |
NSF DBI-1519158 | Account required, Freely available, The research community can contribute to this resource | SCR_016185 | 2026-08-04 09:43:49 | 35 | |||||||||
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Image Data Resource (IDR) Resource Report Resource Website 1+ mentions |
Image Data Resource (IDR) (RRID:SCR_017421) | IDR | storage service resource, data repository, service resource | Public repository of reference image datasets from published scientific studies. Platform for publishing, mining and integrating bioimaging data, following FAIR principles and Euro-BioImaging/ELIXIR imaging strategy using OMERO and Bio-Formats open source software built by Open Microscopy Environment. Deployed on OpenStack cloud running on EMBL-EBI’s Embassy resource, it includes image data linked to independent studies from genetic, RNAi, chemical, localisation and geographic high content screens, super resolution microscopy, and digital pathology. | Repository, reference, image, published, annotated, dataset, FAIR |
is recommended by: NIDDK Information Network (dkNET) is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases |
Free, Available for download, Freely available | r3d100012435 | https://doi.org/10.17616/R3XR0R | SCR_017421 | Image Data Resource, IDR, Image Data Resource (IDR) | 2026-08-04 09:44:12 | 1 | ||||||
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SICAS Medical Image Repository Resource Report Resource Website 1+ mentions |
SICAS Medical Image Repository (RRID:SCR_017420) | storage service resource, data repository, service resource | Medical image repository to store medical research data. | Medical, image, repository, store, data |
is recommended by: NIDDK Information Network (dkNET) is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases |
Free, Freely available | r3d100011560 | https://doi.org/10.17616/R3HP8C | SCR_017420 | Medical Image Repository, SICAS, SICAS Medical Image Repository | 2026-08-04 09:44:09 | 5 | |||||||
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Beckman Coulter: Biomek i7 Hybrid Automated Workstation Resource Report Resource Website 1+ mentions |
Beckman Coulter: Biomek i7 Hybrid Automated Workstation (RRID:SCR_018094) | instrument resource | Liquid handling instrument designed to optimize dependability and walk-away time. Biomek i7 Hybrid with enclosure has up to 45 deck positions and includes both Multichannel and Span-8 pipette heads in enclosed work space. | Liquid handling, instrument, equipment, Beckman Coulter | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_018094.pdf | https://bec-techdocs-prod.s3.us-west-2.amazonaws.com/techdoc/files/ifu/en/C16028AB.pdf?AWSAccessKeyId=ASIA2KJI7HMZ33DV6WQG&Expires=1701735968&Signature=2MDYEbJhW4PJy4sgXzeeS9DyO%2B8%3D&x-amz-security-token=IQoJb3JpZ2luX2VjEP%2F%2F%2F%2F%2F%2F%2F%2F%2F%2F%2FwEaCXVzLXdlc3QtMiJGMEQCIHg6cmtDSAztedNNXtxyHC%2FQ9o4yM1SgSuLP9xeBShEqAiBzvdXKsSIHPDhKAAp89Ph3a%2F5N4WI6Q%2B2vzPWAUmArISr6AghoEAQaDDcwOTI5MjQwNzYwMyIMCupsWUjiXR86CzK6KtcCan1TNZecdLIPuEOW2TsrPrXuHumQlBikN6ce3yhHyhkat%2BXxcoT72Pefl%2FuXb8zIanpeQ2sRYiTG8XuuwjK%2B016PUCUcgWG%2FUbf4t2y12I2SLOd3YI%2FgEHK7sPoIpH2K4tkz%2FVPXgRQ8zMgYMsMSq2XxD%2F2iGkromeIhZvz1a12ertzuOrynkyfT%2FZFAWt0p2NADzT%2F8kc3WLrWByJbzv6vmPs4%2ByZPUdva6vQ6dM2F0%2F9L%2BRULmL8RsHpbOfslrhsEZY9BK%2FuoSx49fTTyKmKPs8g%2FDthw5g6r7YhAzTWk0cVagwcSRZ%2F7xdsjhGusWmQNJvFfNyz72rvaddAINSSLWsjArEdL2NUZahdlFZ%2BzbyqAC3thGwmySgtkHdEVSWmqPHvZ9o80lR9seE1mXvIVtc%2FLW2LVl76gjIxRcND2QtTZKw5CpR%2F8YtYDKySe4eBxtZux8HTD8rbmrBjqfAfP6m3jf8H5DybTLXkGz6gxd3X4fRRuizXOxQGkUA3whw298yFHAZWDEBP3LUp0cL6rJFdjvd7oEJ44qaZRNwKUtjYjk9%2FviPVWPPsZCX%2BIvmEE%2FN77lL6Dav6ASE8fjWuS3V8hnTTbo%2Filx%2F18BNJZIJ1ftJuUMhizI75F9CvvnLtweybGFoajnIOBQkN1ArufaYn%2BGCQPsVh1TOR%2F8Fw%3D%3D | SCR_018094 | 2026-08-04 09:44:17 | 5 |
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