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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
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NIH Data Sharing Repositories Resource Report Resource Website 1+ mentions |
NIH Data Sharing Repositories (RRID:SCR_003551) | NIH Data Sharing Repositories | data or information resource, data set | A listing of NIH supported data sharing repositories that make data accessible for reuse. Most accept submissions of appropriate data from NIH-funded investigators (and others), but some restrict data submission to only those researchers involved in a specific research network. Also included are resources that aggregate information about biomedical data and information sharing systems. The table can be sorted according by name and by NIH Institute or Center and may be searched using keywords so that you can find repositories more relevant to your data. Links are provided to information about submitting data to and accessing data from the listed repositories. Additional information about the repositories and points-of-contact for further information or inquiries can be found on the websites of the individual repositories. | data repository |
lists: NIDDK Information Network (dkNET) lists: Nuclear Receptor Signaling Atlas lists: Biospecimens/Biorepositories: Rare Disease-HUB (RD-HUB) lists: Eukaryotic Pathogen Database Resources lists: Immune Epitope Database and Analysis Resource (IEDB) lists: LONI Image and Data Archive lists: BEI Resource Repository lists: Nanomaterial Registry lists: Metabolomics Workbench lists: National Database for Clinical Trials related to Mental Illness lists: RDoCdb lists: Database of Interacting Proteins (DIP) lists: NIH MRI Study of Normal Brain Development lists: PubChem lists: 1000 Functional Connectomes Project lists: Parkinson's Progression Markers Initiative lists: Mouse Genome Informatics (MGI) lists: Federal Interagency Traumatic Brain Injury Research Informatics System lists: NIH Human Connectome Project lists: Biological General Repository for Interaction Datasets (BioGRID) lists: Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) lists: Nanomaterial Registry is related to: NIH MRI Study of Normal Brain Development is related to: Eukaryotic Pathogen Database Resources is related to: Parkinson's Progression Markers Initiative is related to: Federal Interagency Traumatic Brain Injury Research Informatics System is related to: NIH Human Connectome Project is related to: National Institute on Aging Genetics of Alzheimer’s Disease Data Storage Site (NIAGADS) is related to: Cancer Imaging Archive (TCIA) is related to: Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) is related to: NIDDK Information Network (dkNET) is related to: UniProt is related to: GeneNetwork is related to: Zebrafish Information Network (ZFIN) is related to: WormBase is related to: Database of Interacting Proteins (DIP) is related to: iDASH is related to: PubChem is related to: CardioVascular Research Grid (CVRG) is related to: 1000 Functional Connectomes Project is related to: Mouse Genome Informatics (MGI) is related to: FlyBase is related to: PeptideAtlas is related to: Biological General Repository for Interaction Datasets (BioGRID) is related to: GRDR is related to: National Institute on Drug Abuse Center for Genetic Studies is related to: BEI Resource Repository has parent organization: National Library of Medicine |
NIH | nlx_157683 | SCR_003551 | SciCrunch Registry | 2026-10-31 12:21:57 | 5 | ||||||||
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Agri-environmental Research Data Repository Resource Report Resource Website |
Agri-environmental Research Data Repository (RRID:SCR_006317) | Agri-Environmental Research Data Repository | data repository, service resource, storage service resource | Data repository to preserve and provide access to agricultural and environmental data produced during research projects undertaken at the University of Guelph including datasets on topics such as crop yield, soil moisture, weather and agroforestry. A special emphasis is placed on research funded by Ontario Ministry of Agriculture and Food (OMAF) and MRA. | agriculture, environment, data set |
uses: Dataverse Network Project is listed by: DataCite is listed by: re3data.org has parent organization: University of Guelph; Ontario; Canada has parent organization: Dataverse Network Project |
Ontario Ministry of Agriculture and Food | Terms of use are explained for each study, The community can contribute to this resource, (University of Guelph) | nlx_152012, r3d100010897 | https://doi.org/10.17616/R3FC8N | SCR_006317 | SciCrunch Registry | 2026-10-31 12:14:30 | 0 | ||||||
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STRIDE Virtual Biospecimen Bank Resource Report Resource Website 10+ mentions |
STRIDE Virtual Biospecimen Bank (RRID:SCR_008667) | STRIDE Biospecimen Data Repository, STRIDE Biospecimen Locator | biomaterial supply resource, material resource, tissue bank | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on March 7th, 2023. An online, searchable record of biospecimen attributes and storage location for the following three biobanks at Stanford: * The Bone Marrow Transplant (BMT) program * The Hematology biospecimen bank is a research sample repository focusing on blood, plasma and bone marrow, primarily from leukemia patients. * Cancer Center Pathology Core: The Stanford Comprehensive Cancer Center Tissue Bank stores research samples of both solid tumor and blood from cancer patients, with an emphasis on prostate. As of November 2009, the system contains data on 50,000 biospecimens stored in multiple banks at Stanford. An anonymous Biospecimen Locator allows Stanford researchers to search the STRIDE Virtual Biospecimen Bank for suitable samples without having to know, or expose, any protected patient-specific information. Having determined that suitable specimens exist in one of the constituent biospecimens banks, the researcher can generate a Web-based request form to obtain additional information from the appropriate bank operator(s). Access to specimens is restricted to Stanford Faculty and Staff or affiliates., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | clinical data, biospecimen, data management, blood, plasma, bone marrow, solid tumor, prostate, tumor, leukemia, cancer |
is listed by: One Mind Biospecimen Bank Listing is listed by: Biositemaps has parent organization: Stanford Translational Research Integrated Database Environment and Clinical Data Warehouse |
Leukemia, Cancer | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-33378 | SCR_008667 | SciCrunch Registry | STRIDE Anonymous Biospecimen Locator, STRIDE Anonymous Biospecimen Search Tool, STRIDE J2EE-based biospecimen registration management tracking and distribution system | 2026-10-31 12:20:32 | 17 | ||||||
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Medical Imaging and Data Resource Center (MIDRC) data repository Resource Report Resource Website |
Medical Imaging and Data Resource Center (MIDRC) data repository (RRID:SCR_026907) | data repository, image repository, service resource, storage service resource | Data repository that is hosting medical images. | Data repository, medical images, | Free, Freely available | SCR_026907 | SciCrunch Registry | MIDRC data repository | 2026-10-31 12:24:13 | 0 | ||||||||||
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Pacific Northwest National Laboratory DataHub: Scientific Data Repository Resource Report Resource Website 1+ mentions |
Pacific Northwest National Laboratory DataHub: Scientific Data Repository (RRID:SCR_022255) | data repository, service resource, storage service resource | Provides tools and services to meet scientific data challenges at Pacific Northwest National Laboratory . DataHub helps researchers address the full data life cycle for their institutional projects and provides path to creating findable, accessible, interoperable, and reusable data products. Although open science data is crucial focus of DataHub’s core services, we are interested in working with evidence based data throughout PNNL research community. | Institutional Repository, Project Datasets, Project Publications, Cross-Disciplinary Data Catalog |
uses: DataCite uses: Office of Scientific and Technical Information has parent organization: Pacific Northwest National Laboratory |
DOE 67025F; DOE AC05-76RL01830 |
DOI:10.25584/PNNL.DataHub/1812943 | Free, Freely available | OSTI ID:1812943; re3data DOI:10.17616/R31NJN56; FAIRsharing DOI:10.25504/FAIRsharing.45bf5b, r3d100013802 | https://www.osti.gov/biblio/1812943, https://doi.org/10.17616/R31NJN56 | SCR_022255 | SciCrunch Registry | PNNL DataHub, PNNL.Data, pnnl2 | 2026-10-31 12:18:45 | 7 | |||||
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Repository of molecular brain neoplasia data Resource Report Resource Website 1+ mentions |
Repository of molecular brain neoplasia data (RRID:SCR_004704) | REMBRANDT | analysis service resource, data analysis service, data or information resource, database, portal, production service resource, service resource, topical portal | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 28,2023. REMBRANDT is a data repository containing diverse types of molecular research and clinical trials data related to brain cancers, including gliomas, along with a wide variety of web-based analysis tools that readily facilitate the understanding of critical correlations among the different data types. REMBRANDT aims to be the access portal for a national molecular, genetic, and clinical database of several thousand primary brain tumors that is fully open and accessible to all investigators (including intramural and extramural researchers), as well as the public at-large. The main focus is to molecularly characterize a large number of adult and pediatric primary brain tumors and to correlate those data with extensive retrospective and prospective clinical data. Specific data types hosted here are gene expression profiles, real time PCR assays, CGH and SNP array information, sequencing data, tissue array results and images, proteomic profiles, and patients'''' response to various treatments. Clinical trials'''' information and protocols are also accessible. The data can be downloaded as raw files containing all the information gathered through the primary experiments or can be mined using the informatics support provided. This comprehensive brain tumor data portal will allow for easy ad hoc querying across multiple domains, thus allowing physician-scientists to make the right decisions during patient treatments., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | gene, genetic, cancer, glioma, tumor, clinical genomics, functional genomics, clinical trial, genomics, gene expression, chromosomal aberration, clinical data, clinical, cellular pathway, gene ontology, molecule, brain, neoplasia, brain tumor, adult, pediatric, child, adolescent, gene expression profile, real time pcr assay, cgh array, snp array, sequence, tissue array, image, proteomic profile, treatment, protocol, molecular data, oncology, data mining, copy number array, gene expression array, secretion, kinase, membrane, gene-anomaly, translational research, personalized medicine, data integration, pathway, cell, phenotype |
is related to: Gene Ontology is related to: Glioma Molecular Dignostic Initiatives has parent organization: National Cancer Institute |
Glioma, Brain cancer, Brain tumor | NCI ; NINDS |
PMID:19208739 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00230 | SCR_004704 | SciCrunch Registry | REMBRANDT (Repository of Molecular Brain Neoplasia Data), REMBRANDT - Repository of Molecular Brain Neoplasia Data, REpository for Molecular BRAin Neoplasia DaTa (REMBRANDT) | 2026-10-31 12:13:54 | 2 | ||||
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CODR: C PATH On Line Data Repository Resource Report Resource Website 1+ mentions |
CODR: C PATH On Line Data Repository (RRID:SCR_001388) | CODR | analysis service resource, data analysis service, data or information resource, data repository, database, production service resource, service resource, storage service resource | A repository of de-identified control arm data of patients from clinical studies of Alzheimer's disease and Mild Cognitive Impairment. It provides the ability to analyze the data online with the R statistical analysis program, create and download standard reports, run complex queries, or download data to a desktop for further analysis. Additional data will be added to the database over time. Critical Path Institute consortia members and qualified researchers may upload and work on scientific data relevant to biomarkers of drug toxicity, neurodegenerative diseases, and patient-reported outcomes. | clinical data, alzheimer's disease, camd, biomarker, drug toxicity, neurodegenerative disease, patient-reported outcome, patient outcome, metadata standard, data repository | has parent organization: CAMD | Neurodegenerative disease, Drug toxicity, Alzheimer's disease, Mild Cognitive Impairment | Free, Freely Available | nlx_152562 | SCR_001388 | SciCrunch Registry | C-Path Online Data Repository (CODR), CPATH online data repository, C-PATH Online Data Repository, C PATH On Line Data Repository | 2026-10-31 12:12:51 | 2 | ||||||
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NIH Pediatric MRI Data Repository Resource Report Resource Website |
NIH Pediatric MRI Data Repository (RRID:SCR_014149) | NIHPD | data or information resource, database, image collection | A database which contains longitudinal structural MRIs, spectroscopy, DTI and correlated clinical/behavioral data from approximately 500 healthy, normally developing children, ages newborn to young adult. | database, image collection, structural mri, dti, spectroscopy, human brain, child |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: National Institutes of Health |
NICHD ; National Institute on Drug Abuse ; NIMH ; NINDS |
Available to the research community, Access must be granted | http://pediatricmri.nih.gov/nihpd/info/index.html | SCR_014149 | SciCrunch Registry | Pediatric MRI Data Repository, NIH MRI Study of Normal Brain Development Pediatric MRI Data Repository | 2026-10-31 12:16:11 | 0 | ||||||
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Stowers Original Data Repository Resource Report Resource Website 10+ mentions |
Stowers Original Data Repository (RRID:SCR_002640) | Stowers ODR, ODR | bibliography, data or information resource, data repository, database, service resource, storage service resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented January 13, 2022. Open access repository of original, unprocessed data underlying work published by Stowers researchers to allow the scientific community to validate and extend the findings made by Stowers researchers. For papers first submitted for publication after November 1, 2011, the Stowers Institute requires its members to deposit original data files into the Stowers Original Data Repository or to repositories maintained by third parties at the time of publication. Access to the Stowers Original Data Repository is free, but you will be asked to register before you can download data., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | data set, image |
is related to: OME-TIFF Format has parent organization: Stowers Institute for Medical Research |
Free, Available for download, Freely available | nlx_156067 | SCR_002640 | SciCrunch Registry | Stowers Institute Original Data Repository | 2026-10-31 12:13:09 | 12 | |||||||
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Stanford Medicine Research Data Repository Resource Report Resource Website 100+ mentions |
Stanford Medicine Research Data Repository (RRID:SCR_018686) | STARR | data repository, service resource, storage service resource | Platform developed and operated by Stanford Medicine Research IT team for working with clinical data for research purposes. Permits collection and aggregation of all clinical data generated at Stanford for care purposes, and articulates formal approval process each research project must follow in order to obtain and work with this data for research purpose. Home of stride/web tools for Cohort Discovery and Chart Review. | Clinical data, Stanford data, care purpose, stride web tools, cohort discovery, data | is related to: Stanford University School of Medicine; California; USA | Restricted | https://starr.stanford.edu/team | SCR_018686 | SciCrunch Registry | STRIDE-web, STAnford medicine Research data Repository | 2026-10-31 12:17:06 | 223 | |||||||
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Antarctic Meteorological Research and Data Center Repository Resource Report Resource Website |
Antarctic Meteorological Research and Data Center Repository (RRID:SCR_023126) | data repository, service resource, storage service resource | AMRDC Repository provides archival, preservation, access, and metadata authoring services for Antarctic meteorological data, managing data from submission to end-user retrieval. The repository hosts data collected by the Antarctic Meteorological Research Center and Automatic Weather Station projects, as well as campaign meteorological datasets deposited by other Antarctic investigators. | is listed by: DataCite | Free, Freely available | DOI:10.48567 | https://doi.org/10.48567, https://dx.doi.org/10.48567 | SCR_023126 | SciCrunch Registry | Antarctic Meteorological Research and Data Center Repository | 2026-10-31 12:18:56 | 0 | ||||||||
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BioHeritage National Science Challenge Data Repository Resource Report Resource Website |
BioHeritage National Science Challenge Data Repository (RRID:SCR_023141) | data repository, service resource, storage service resource | Data catalogue and repository for New Zealand's Biological Heritage National Science Challenge. |
is listed by: DataCite is listed by: re3data.org |
Free, Freely available | DOI:10.17616/R31NJN01, DOI:10.34721, r3d100013617 | https://doi.org/10.34721, https://dx.doi.org/10.34721, http://doi.org/10.17616/R31NJN01, https://doi.org/10.17616/R31NJN01 | SCR_023141 | SciCrunch Registry | BioHeritage National Science Challenge Data Repository | 2026-10-31 12:18:50 | 0 | ||||||||
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Federated Research Data Repository Resource Report Resource Website |
Federated Research Data Repository (RRID:SCR_019218) | FRDR | data or information resource, portal, project portal | Canadian data repositories project. Data submitted to FRDR is housed on Compute Canada managed infrastructure at University of Victoria, BC or at University of Waterloo, ON. Research data submitted to FRDR does not leave Canada.Most of metadata is shared with Globus, running on Amazon Web Services in the USA, to be indexed and made available for discovering datasets. Certain metadata fields, for example, submitter contact information, are not shared with Globus.Larger uploads are made using Globus, only public metadata is stored there. | Canadian data repository, research data, metadata, dataset, Globus, data storage |
is related to: University of Victoria; British Columbia; Canada is related to: University of Waterloo; Ontario; Canada |
Restricted | SCR_019218 | SciCrunch Registry | 2026-10-31 12:19:25 | 0 | |||||||||
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The NINDS Human Cell and Data Repository (NHCDR) Resource Report Resource Website 10+ mentions |
The NINDS Human Cell and Data Repository (NHCDR) (RRID:SCR_016319) | NHCDR | biomaterial supply resource, material resource, tissue bank | Cell sources currently include fibroblasts and/or induced pluripotent stem cells for Alzheimer's Disease, Amyotrophic Lateral Sclerosis (ALS), Ataxia-telangiectasia, Frontotemporal Lobar Degeneration (FTD), Huntington's Disease, Parkinson's Disease, and healthy controls. Cell sources, including isogenic cell lines for current and new diseases covered by the NINDS will be added over the next several years. | Stem, cell, fibroblast, plutipotent, isogenic |
is used by: NIH Heal Project is recommended by: National Library of Medicine is listed by: re3data.org works with: Cellosaurus |
Alzheimer's Disease, Amyotrophic Lateral Sclerosis (ALS), Ataxia-telangiectasia, Frontotemporal Lobar Degeneration (FTD), Huntington's Disease, Parkinson's Disease | NINDS ; NLM |
Restricted | https://nindsgenetics.org/ | SCR_016319 | SciCrunch Registry | NINDS Human Cell and Data Repository (NHCDR) | 2026-10-31 12:20:48 | 21 | |||||
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Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) Resource Report Resource Website 100+ mentions |
Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) (RRID:SCR_013142) | BioLINCC | data or information resource, database | Repository that serves to coordinate searches across data and biospecimen collections from participants in numerous clinical trials and epidemiologic studies and to provide an electronic means for requests for additional information and the submission of requests for collections. The collections, comprising data from more than 80 trials or studies and millions of biospecimens, are available to qualified investigators under specific terms and conditions consistent with the informed consents provided by the individual study participants. Some datasets are presented with studies and supporting materials to facilitate their use in reuse and teaching. Datasets support basic research, clinical studies, observational studies, and demonstrations. Researchers wishing to apply to submit biospecimen collections to the NHLBI Biorepository for sharing with qualified investigators may also use this website to initiate that process. | cardiovascular, pulmonary, hematology, clinical, clinical trial, blood, lung, heart, biological specimen, health, disease, medicine, epidemiology, epidemiologic study, FASEB list |
is listed by: One Mind Biospecimen Bank Listing is listed by: DataCite is listed by: NIH Data Sharing Repositories is listed by: Connected Researchers is listed by: NIDDK Information Network (dkNET) is related to: NIH Data Sharing Repositories is related to: Framingham Heart Study has parent organization: National Heart Lung and Blood Institute |
NHLBI | Public, The community can contribute to this resource | r3d100010834, nlx_151758 | https://biolincc.nhlbi.nih.gov/, https://biolincc.nhlbi.nih.gov/ | SCR_013142 | SciCrunch Registry | NHLBI Biorepository | 2026-10-31 12:20:48 | 304 | |||||
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Harvard Digestive Diseases Center Bio-Repository and Data Registry for Human Material Resource Report Resource Website |
Harvard Digestive Diseases Center Bio-Repository and Data Registry for Human Material (RRID:SCR_015590) | access service resource, core facility, service resource | Core facility that supports basic, translational, and clinical research in the digestive diseases by providing access to human materials and resources in statistics and study design. It also aims to to forge connections and support collaboration between HDDC Clinical Associates and Members, support a well-organized infrastructure for acquisition and storage of clinical samples, and provide professional support in biostatistics and study design to HDDC members and Clinical Associates. | digestive disease, clinical care, metadata, biostatistics, collaboration, clinical sample |
is listed by: NIDDK Information Network (dkNET) has parent organization: Harvard Digestive Disease Center is organization facet of: Harvard Digestive Disease Center |
digestive disease | NIDDK P30 DK034854 | Available to the research community, Available to affiliated researchers, Available to HDDC Clinical Associates and Members | SCR_015590 | SciCrunch Registry | 2026-10-31 12:22:53 | 0 | ||||||||
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Friedrich Miescher Institute data repository Resource Report Resource Website 1+ mentions |
Friedrich Miescher Institute data repository (RRID:SCR_021214) | data or information resource, data repository, service resource, storage service resource | Data repository for Friedrich Miescher Institute for Biomedical Research in areas of epigenetics, quantitative biology, and neurobiology. | Friedrich Miescher Institute for Biomedical Research, epigenetics data, quantitative biology data, neurobiology data | has parent organization: Friedrich Miescher Institute | Data is freely available | SCR_021214 | SciCrunch Registry | FMI data repository | 2026-10-31 12:18:08 | 3 | |||||||||
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NIH Common Data Element Repository Resource Report Resource Website 1+ mentions |
NIH Common Data Element Repository (RRID:SCR_001390) | NIH CDE Resource Portal, CDE Resource Portal | common data element, data or information resource, narrative resource, standard specification | A repository of Common Data Elements (CDE). The CDE is a standardized, precisely defined question, paired with a set of allowable responses, used systematically across different sites, studies, or clinical trials to ensure consistent data collection. Multiple CDEs (from one or more Collections) can be curated into Forms. Forms in the Repository might be original, or might recreate the format of real-world data collection instruments or case report forms. NIH has endorsed collections of CDEs that meet established criteria. NIH-endorsed CDEs are designated with a gold ribbon. Users can Browse NIH-Endorsed CDEs, Browse All CDEs, or Browse Forms. | clinical research, clinical, patient registry, human subject research, human subject, data element, case report form, interoperability, data sharing | has parent organization: National Library of Medicine | Free, Freely Available | nlx_152564 | https://cde.nlm.nih.gov/home, http://www.nlm.nih.gov/cde/ | SCR_001390 | SciCrunch Registry | NIH Common Data Element (CDE) Resource Portal, Common Data Element (CDE) Resource Portal | 2026-10-31 12:12:51 | 8 | ||||||
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Johns Hopkins Research Data Repository Resource Report Resource Website 1+ mentions |
Johns Hopkins Research Data Repository (RRID:SCR_014728) | data repository, service resource, storage service resource | Open access repository for Johns Hopkins University researchers to share their research data. Data repository is administered by professional curators at JHU Data Services, who will work with depositors to enable future discovery and reuse of your data, and ensure your data is Findable, Accessible, Interoperable and Reusable (FAIR). Each dataset has citation and DOI, facilitating attribution, and connection to research publications. | FAIR, data collection, data set, public data, education, training, data archive | Free, Freely available | r3d100011836 | https://doi.org/10.17616/R3RW77 | https://archive.data.jhu.edu/dvn/, http://dms.data.jhu.edu/archiving-2/ | SCR_014728 | SciCrunch Registry | 2026-10-31 12:16:19 | 8 | ||||||||
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Qualitative Data Repository Resource Report Resource Website 1+ mentions |
Qualitative Data Repository (RRID:SCR_022833) | QDR | data repository, service resource, storage service resource | Archive for storing and sharing digital data (and accompanying documentation) generated or collected through qualitative and multi method research in social sciences. QDR provides data management consulting services and actively curates all data projects, maintaining value and usefulness of data over time, and ensuring their availability and findability for re-use. | FAIR, social sciences data, storing and sharing digital data, CoreTrustSeal standards |
is used by: NIH Heal Project is listed by: re3data.org is listed by: DataCite is listed by: FAIRsharing |
Free, Freely available | DOI:10.5064, DOI:10.25504/FAIRsharing.bmz5ap, r3d100011038, DOI:10.17616/r3cs51 | https://www.re3data.org/repository/r3d100011038, https://doi.org/10.17616/r3cs51, https://doi.org/10.5064/, https://dx.doi.org/10.5064/, https://fairsharing.org/10.25504/FAIRsharing.bmz5ap, https://doi.org/10.17616/R3CS51 | SCR_022833 | SciCrunch Registry | Qualitative Data Repository at Syracuse University | 2026-10-31 12:18:42 | 6 |
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