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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Ranking Tables of NIH Funding to US Medical Schools in 2010 Resource Report Resource Website 1+ mentions |
Ranking Tables of NIH Funding to US Medical Schools in 2010 (RRID:SCR_013272) | data or information resource, data set | Excel files available for download of ranking tables of NIH Funding to US Medical Schools in 2010, school and Principal Investigator (PI) rankings by Medical School Department, direct plus indirect costs (excluding both R & D contracts and American Recovery and Reinvestment Act (ARRA) Awards), etc. Categories under the Basic Science Department and Clinical Science Department are available as well as the rank of each School of Medicine from 2001-2010. The data in the 2010 Award files was obtained from the Research Portfolio Online Reporting Tool (RePORT) from the National Institutes of Health at http://report.nih.gov/award/trends/AggregateData.cfm. The Award Data correspond to the US Government fiscal year. Awards for 2010 correspond to those granted from 1 October 2009-30 September 2010. There is considerable variation on how universities credit awards and how the NIH deals with these variations. | funding, us, medical school, ranking, department, award |
uses: National Institutes of Health Research Portfolio Online Reporting Tool is related to: National Institutes of Health has parent organization: Blue Ridge Institute for Medical Research; North Carolina; USA |
nif-0000-06697 | SCR_013272 | 2010 Ranking Tables of NIH Funding | 2026-08-08 12:06:25 | 1 | |||||||||
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PhyloTree.org Resource Report Resource Website 100+ mentions |
PhyloTree.org (RRID:SCR_012948) | PhyloTree.org | data or information resource, data set | A phylogenetic tree of global human mitochondrial DNA variation, based on both coding- and control-region mutations, and including haplogroup nomenclature. | is listed by: OMICtools | PMID:18853457 | Free, Acknowledgement requested | OMICS_01643 | SCR_012948 | PhyloTree | 2026-08-08 12:06:25 | 370 | |||||||
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Data Elixir Resource Report Resource Website |
Data Elixir (RRID:SCR_013762) | information resource, software resource | A web-based information resource providing current news and resources relevant to data science. Users can subscribe to the weekly newsletter by providing an email address or visit the site. The site displays the current week's news and houses an archive of their past newsletters. | web application, newsletter, data science, resources, current events |
is listed by: Connected Researchers is related to: Connected Researchers |
free, public | SCR_013762 | 2026-08-08 12:06:24 | 0 | ||||||||||
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MGI strains Resource Report Resource Website 1+ mentions |
MGI strains (RRID:SCR_012950) | FIMRe | data or information resource, data set | A list of major inbred mouse strains from the Jackson laboratories. This list is not being actively maintained (found on Nov 27, 2013). |
is related to: Jackson Laboratory is related to: Mutant Mouse Resource and Research Center is related to: European Mouse Mutant Archive is related to: RIKEN BioResource Center has parent organization: Mouse Genome Informatics (MGI) |
nlx_155865 | SCR_012950 | 2026-08-08 12:06:18 | 2 | ||||||||||
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Stark Cross-Sectional Aging Resource Report Resource Website 1+ mentions |
Stark Cross-Sectional Aging (RRID:SCR_014171) | data or information resource, data set | Behavioral and imaging data from about 120 participants aged 18-89. Data were collected as part of a grant to use high-resolution imaging and advanced behavioral tasks to understand how aging affects the hippocampus and how this is related to age-related cognitive decline. The full dataset includes traditional neuropsycholgical measures, hippocampal-specific behavioral measures, whole-brain DTI, high-resolution DTI of the medial temporal lobes, and structural MRI including segmentation of grey/white/CSF, of cortical regions and of hippocampal subfields. | data set, aging, hippocampus, behavioral, dti, mri, image |
uses: Neuroimaging Informatics Technology Initiative is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: University of California at Irvine; California; USA |
NIA R01 AG034613 | Available to the research community | SCR_014171 | 2026-08-08 12:06:19 | 1 | |||||||||
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YMDTI: Diffusion Tensor Images of Healthy Young Males Resource Report Resource Website |
YMDTI: Diffusion Tensor Images of Healthy Young Males (RRID:SCR_014183) | YMDTI | data or information resource, data set | A dataset which contains diffusion tensor images of 93 healthy, young male subjects. | data set, diffusion tensor image, young male subject | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Available to the research community | SCR_014183 | Diffusion Tensor Images of Healthy Young Males | 2026-08-08 12:06:26 | 0 | ||||||||
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Human Brain Project Cell Morphology Resource Report Resource Website |
Human Brain Project Cell Morphology (RRID:SCR_014306) | data or information resource, data set | Data set about mapping information provided as text files. The text files contain 3D representations of neuronal morphologies reconstructed using Neurolucida. | cell morphology, data set, mapping, 3d representation, neuronal morphology | has parent organization: Ecole Polytechnique Federale de Lausanne; Lausanne; Switzerland | PMID:26451489 | http://data.neuinfo.org/hbp/20160125_mapping_filename_to_cell_class.csv | SCR_014306 | 2026-08-08 12:06:25 | 0 | |||||||||
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Volcano Web Service crawled by BCube Resource Report Resource Website |
Volcano Web Service crawled by BCube (RRID:SCR_013735) | data or information resource, data set | This web service provides volcano and earthquake information. It also has tsunami events and tsunami tide gauges, and plate boundaries. BPR and DART stations. Also volcanic eruptions. | has parent organization: National Oceanic and Atmospheric Administration | SCR_013735 | 2026-08-08 12:06:26 | 0 | ||||||||||||
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Aging Status and Sense of Control (ASOC) Resource Report Resource Website |
Aging Status and Sense of Control (ASOC) (RRID:SCR_013500) | ASOC | data or information resource, data set | A dataset generated longitudinal study that aims to explain the relationship between age and changes in the sense of control over one''''s life, over two follow-up periods. The main hypotheses are (a) over a period of time, the sense of control declines by an amount that increases with age; (b) the change in sense of control reflects an underlying change in biosocial function, which accelerates with age; (c) higher social status slows the decline in the sense of control, possibly by preserving biosocial function; and (d) changes in biosocial function and in the sense of control have deviation-amplifying reciprocal effects that accelerate age-dependent changes in the sense of control. This was a three-wave panel survey with fixed 3-year intervals and repeated assessments of the same variables. Questionnaire topics focused on: physical health (subjective health; activities of daily living; height and weight; health conditions; expected personal longevity); health behavior (exercise, smoking, diet, alcohol use); use of medical services (medical insurance coverage, prescription drug use); work status (current employment status; title of current job or occupation and job description; types of work, tasks, or activities; description of work or daily activity and interactions; supervisory status; management position and level; work history); sense of controlextent of agreement or disagreement with planning and responsibility versus luck and bad breaks; sense of victimhood versus control; social support and participation; personal and household demographics; marital and family relations; socioeconomic status; history of adversity. * Dates of Study: 1994-2001 * Sample Size: 2,593 (Waves 1-2); 1.144 (Wave 3) * Study Features: Longitudinal Data Archives: http://www.sscnet.ucla.edu/issr/da/da_catalog/da_catalog_titleRecord.php?studynumber=I3334V1 | longitudinal, control, physical health, health behavior, late adult human, activities of daily living, disease, health services utilization, health status, life event, life satisfaction, mental health, physical fitness, self concept, social network, social status, survey data, telephone interview |
is listed by: Inter-university Consortium for Political and Social Research (ICPSR) is related to: National Archive of Computerized Data on Aging (NACDA) has parent organization: University of Texas at Austin; Texas; USA |
Aging | NIA RO1-AG12393 | Public: The first three waves of data are available at ICPSR. | nlx_151355 | SCR_013500 | Aging Status and Sense of Control, Aging Status Sense of Control (ASOC) | 2026-08-08 12:06:26 | 0 | |||||
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CMA Resource Report Resource Website 10+ mentions |
CMA (RRID:SCR_012779) | CMA | commercial organization, software resource | A software package to do meta-analysis which works in a spreadsheet interface and also provides forest plots, which are useful for visualizing between-study heterogeneity. | is listed by: OMICtools | Commercial license | OMICS_00233 | SCR_012779 | Comprehensive Meta-analysis | 2026-08-08 12:06:23 | 23 | ||||||||
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Longitudinal Studies of Aging Resource Report Resource Website |
Longitudinal Studies of Aging (RRID:SCR_013355) | LSOA, LSOAs | data or information resource, data set | A data set of a multicohort study of persons 70 years of age and over designed primarily to measure changes in the health, functional status, living arrangements, and health services utilization of two cohorts of Americans as they move into and through the oldest ages. The project is comprised of four surveys: * The 1984 Supplement on Aging (SOA) * The 1984-1990 Longitudinal Study of Aging (LSOA) * The 1994 Second Supplement on Aging (SOA II) * The 1994-2000 Second Longitudinal Study of Aging (LSOA II) The surveys, administered by the U.S. Census Bureau, provide a mechanism for monitoring the impact of proposed changes in Medicare and Medicaid and the accelerating shift toward managed care on the health status of the elderly and their patterns of health care utilization. SOA and SOA II were conducted as part of the in-person National Health Interview Survey (NHIS) of noninstitutionalized elderly people aged 55 years and over living in the United States in 1984, and at least 70 years of age in 1994, respectively. The 1984 SOA served as the baseline for the LSOA, which followed all persons who were 70 years of age and over in 1984 through three follow-up waves, conducted by telephone in 1986, 1988, and 1990. The SOA covered housing characteristics, family structure and living arrangements, relationships and social contracts, use of community services, occupation and retirement (income sources), health conditions and impairments, functional status, assistance with basic activities, utilization of health services, nursing home stays, and health opinions. Most of the questions from the SOA were repeated in the SOA II. Topics new to the SOA II included use of assistive devices and medical implants; health conditions and impairments; health behaviors; transportation; functional status, assistance with basic activities, unmet needs; utilization of health services; and nursing home stays. The major focus of the LSOA follow-up interviews was on functional status and changes that had occurred between interviews. Information was also collected on housing and living arrangements, contact with children, utilization of health services and nursing home stays, health insurance coverage, and income. LSOA II also included items on cognitive functioning, income and assets, family and childhood health, and more extensive health insurance information. The interview data are augmented by linkage to Medicare enrollment and utilization records, the National Death Index, and multiple cause-of-death records. Data Availability: Copies of the LSOA CD-ROMs are available through the NCHS or through ICPSR as Study number 8719. * Dates of Study: 1984-2000 * Study Features: Longitudinal * Sample Size: ** 1984: 16,148 (55+, SOA) ** 1984: 7,541(70+, LSOA) ** 1986: 5,151 (LSOA followup 1) ** 1988: 6,921 (LSOA followup 2) ** 1990: 5,978 (LSOA followup 3) ** 1994-6: 9,447 (LSOA II baseline) ** 1997-8: 7,998 (LSOA II wave 2) ** 1999-0: 6,465 (LSOA II wave 3) Link: * LSOA 1984-1990 ICPSR: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/08719 | health, functional status, living arrangement, health services utilization, late adult human, american, longitudinal, assisted living, chronic disability, chronic illness, disability, health care, health care service, illness, independent living, medicare, mortality rate, supportive services, mortality, survey, behavior, interview, housing, demographic, social, economic, middle adult human |
is listed by: Inter-university Consortium for Political and Social Research (ICPSR) is related to: Nihon University Japanese Longitudinal Study of Aging has parent organization: Centers for Disease Control and Prevention |
Aging | National Center for Health Statistics ; NIA |
Public | nlx_151843 | SCR_013355 | LSOA - Longitudinal Studies of Aging, Longitudinal Studies of Aging (LSOAs) | 2026-08-08 12:06:24 | 0 | |||||
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Epilepsy T1 and Hippocampal Segmentation Datasets Resource Report Resource Website |
Epilepsy T1 and Hippocampal Segmentation Datasets (RRID:SCR_014926) | data or information resource, data set | Shared dataset which consists of skull-stripped T1 MRI images and segmented hippocampi of 163 Temporal Lobe Epilepsy (TLE) patients. The T1 and hippocampal segmentation data of TLE patients are uploaded in three separate datasets which can be accessed from the main site. | hippocampus, t1, dataset, skull stripped, mri, segmented hippocampus, epilepsy, temporal lobe epilepsy, tle | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Available for download | SCR_014926 | 2026-08-08 12:06:21 | 0 | ||||||||||
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Array Designer Resource Report Resource Website 1+ mentions |
Array Designer (RRID:SCR_010960) | Array Designer | commercial organization, software resource | Oligo and cDNA Microarray Design Software that designs thousands of primers and probes for oligo and cDNA microarrays in seconds. | is listed by: OMICtools | OMICS_00825 | SCR_010960 | 2026-08-08 12:06:09 | 2 | ||||||||||
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SyStat Resource Report Resource Website 1000+ mentions |
SyStat (RRID:SCR_010455) | SyStat | commercial organization, software resource | A commercial software tool for statistical analysis. | statistics | is listed by: SoftCite | nlx_157643 | SCR_010455 | 2026-08-08 12:05:57 | 1102 | |||||||||
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GeneSpring GX Resource Report Resource Website 1000+ mentions |
GeneSpring GX (RRID:SCR_010972) | GeneSpring GX | commercial organization, software resource | Powerful, accessible statistical tools for fast visualization and analysis of microarrays - expression arrays, miRNA, exon arrays and genomics copy number data. |
is listed by: OMICtools is listed by: SoftCite |
Commercial license | OMICS_00853 | SCR_010972 | 2026-08-08 12:05:58 | 1817 | |||||||||
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NYU Institute for Pediatric Neuroscience Sample Resource Report Resource Website |
NYU Institute for Pediatric Neuroscience Sample (RRID:SCR_010458) | NYU IPN Sample, NYUIQ | data or information resource, data set | Datasets including a collection of scans from 49 psychiatrically evaluated neurotypical adults, ranging in age from 6 to 55 years old, with age, gender and intelligence quotient (IQ) information provided. Future releases will include more comprehensive phenotypic information, and child and adolescent datasets, as well as individuals from clinical populations. The following data are released for every participant: * At least one 6-minute resting state fMRI scan (R-fMRI) * * One high-resolution T1-weighted mprage, defaced to protect patient confidentiality * Two 64-direction diffusion tensor imaging scans * Demographic information (age, gender) and IQ-measures (Verbal, Performance, and Composite; Weschler Abbreviated Scale of Intelligence - WASI) * Most participants have 2 R-fMRI scans, collected less than 1 hour apart in the same scanning session. Rest_1 is always collected first. | adult human, young human, intelligence quotient, child, adolescent, clinical, resting state fmri, t1-weighted, mprage, diffusion tensor imaging, fsiq, viq, piq, neuroimaging, brain, image collection |
has parent organization: 1000 Functional Connectomes Project has parent organization: New York University; New York; USA |
Neurotypical, Aging | Autism Speaks ; Stavros Niarchos Foundation ; Leon Levy Foundation ; Phyllis Green and Randolph Cwen ; NIMH R01MH083246 |
Creative Commons Attribution-NonCommercial License | nlx_157644 | SCR_010458 | NYU Phyllis Green and Randolph Cwen Institute for Pediatric Neuroscience Sample | 2026-08-08 12:06:08 | 0 | |||||
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Virginia Tech Carilion Research Institute Sample Resource Report Resource Website |
Virginia Tech Carilion Research Institute Sample (RRID:SCR_010459) | VTCRI Sample | data or information resource, data set | Dataset including a T1 weighted anatomical image as well as two 10-minute resting state scans acquired during the same session from 25 psychiatrically screened healthy adults (community sample) ranging in age from 18 to 65 years old, with age, sex, education level, and ethnicity provided. Some subjects also returned several weeks after the first scan for a second scanning session. The number of days between scan sessions, for subjects that had two sessions, is indicated in the demographics spreadsheet. The study scanning protocol included: # 13 sec localizer # 4 minute 38 second T1 weighted anatomical # Subject given instructions for resting state scan #1 # 10 minute 4 second resting state scan #1 # Subject given instructions for resting state scan #2 # 10 minute 4 second resting state scan #2 Scanning was performed on one of three different 3T Siemens TIM TRIOs at the Human Neuroimaging Lab at Baylor College of Medicine in Houston, Texas. All scans were acquired using the standard Siemen''s TIM 12-channel head matrix. The resting state scans were acquired with a custom sequence that is a slight modification to the standard Siemen''s EPI sequence that supports real-time fMRI. Images were acquired slightly oblique to minimize dephasing in the orbito-frontal cortex. Detailed scanning parameters are included in separate .pdf files. | resting state fmri, t1-weighted, mprage, adult human, early adult human, late adult human, middle adult human, image collection, neuroimaging, brain, demographic, fmri, aging |
has parent organization: 1000 Functional Connectomes Project has parent organization: Virginia Polytechnic Institute and State University; Virginia; USA |
Healthy | Creative Commons Attribution-NonCommercial License | nlx_157645 | SCR_010459 | Virginia Tech CRI Sample | 2026-08-08 12:05:57 | 0 | ||||||
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DataSift Resource Report Resource Website 1+ mentions |
DataSift (RRID:SCR_010708) | commercial organization, software resource | A portal that allows users to track specific words, phrases or nearby relationships from social media sources including Twitter, Digg and others. Datasift aggregates, filters, records, and analyzes real-time data from a variety of social sources using our Curation Stream Definition Language (CSDL) allowing customers to curate their own news. | nlx_86821 | SCR_010708 | TweetMeme | 2026-08-08 12:05:58 | 4 | |||||||||||
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ImmunoSpot Software for Analyzing ELISPOT Assays Resource Report Resource Website 100+ mentions |
ImmunoSpot Software for Analyzing ELISPOT Assays (RRID:SCR_011082) | ImmunoSpot | commercial organization, software resource | ELISpot analyzing software | SciRes_000119 | SCR_011082 | ImmunoSpot Software for ELISPOT Analysis, CTL ImmunoSpot | 2026-08-08 12:06:00 | 189 | ||||||||||
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miRCURY LNA microRNA Array Analysis Software Resource Report Resource Website |
miRCURY LNA microRNA Array Analysis Software (RRID:SCR_010952) | miRCURY LNA microRNA Array Analysis Software | commercial organization, software resource | Software for fast and accurate analysis of miRCURY LNA microRNA Array data. | is listed by: OMICtools | Commercial license | OMICS_00786 | SCR_010952 | 2026-08-08 12:06:07 | 0 |
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