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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Integrated Videos
 
Resource Report
Resource Website
Integrated Videos (RRID:SCR_003613) database, data or information resource, video resource A virtual database indexing video and other multimedia content from: NIH VideoCasting and Podcasting, JoVE: Journal of Visualized Experiments, The Guardian: Science Videos, Biointeractive, goCognitive, UCSF Laboratory for Visual Neuroscience, and Clarity resources. movie, video, database, integrated uses: NIH VideoCasting
uses: Journal of Visualized Experiments
uses: The Guardian: Science Videos
uses: Biointeractive
uses: goCognitive
uses: UCSF Laboratory for Visual Neuroscience
uses: Clarity resources
is used by: NIF Data Federation
is used by: Aging Portal
has parent organization: Integrated
Data are licensed by their respective owners. Use and distribution is subject to the Terms of Use by the original resource as well as the, Creative Commons Attribution License nlx_13182 https://legacy.neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-11 http://neuinfo.org/nif/nifgwt.html?query=nlx_13182, https://www.neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nlx_13182-1, https://neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-11 SCR_003613 NIF Integrated Videos View, NIF Integrated Videos, Integrated Video, NIF Integrated Video, NIF Video, Integrated Video View, NIF Integrated Video View, Integrated Videos View, NIF Videos 2026-08-04 09:40:57 0
BAMS Cells
 
Resource Report
Resource Website
10+ mentions
BAMS Cells (RRID:SCR_003531) BAMS Cells, BAMS Cell database, data or information resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 6, 2023.BAMS is an online resource for information about neural circuitry. The BAMS Cell view focuses on the major brain regions and which cells are contained therein. neuroanatomy, cell, neuron, neural circuitry, brain is used by: NIF Data Federation
has parent organization: Brain Architecture Management System
NIMH ;
NINDS ;
NIBIB
THIS RESOURCE IS NO LONGER IN SERVICE. nif-0000-90175 http://brancusi.usc.edu/bkms/ SCR_003531 Brain Architecture Management System Cells 2026-08-04 09:40:56 11
Drug Related Gene Database
 
Resource Report
Resource Website
1+ mentions
Drug Related Gene Database (RRID:SCR_003330) DRG database, data or information resource Gene expression data from published journal articles that test hypotheses relevant to neuroscience of addiction and addictive behavior. Data types include effects of particular drug, strain, or knock out on particular gene, in particular anatomical region. Focuses on gene expression data and exposes data from investigations using DNA microarrays, polymerase chain reaction, immunohistochemistry and in-situ hybridizations. Data are available for query through NIF interface.Data submissions are welcome. drug of abuse, gene expression, brain region, brain, american recovery and reinvestment act, brain, dna microarray, microarray, addiction uses: PubMed
is listed by: NIF Data Federation
is related to: Integrated Manually Extracted Annotation
has parent organization: Neuroscience Information Framework
NIDA Free, Freely available nif-0000-37443 https://confluence.crbs.ucsd.edu/login.action?os_destination=%2Fpages%2Fviewpage.action%3FspaceKey%3DNIF%26title%3DDRG&permissionViolation=true SCR_003330 DRG Database, Drug Dependent Gene Database 2026-08-04 09:40:53 2
Brede Database
 
Resource Report
Resource Website
Brede Database (RRID:SCR_003327) Brede database, data or information resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 4th, 2023. A database of human data from functional neuroimaging scientific articles containing Talairach coordinates that provides data for novel information retrieval techniques and automated meta-analyses. Each article in this database is identified by a unique number: A WOBIB. Some of the structure of the Brede database is similar to the structure of the BrainMap database (Research Imaging Center, San Antonio). The database is inspired by the hierarchical structure of BrainMap with scientific articles (bib structures) on the highest level containing one or more experiments (exp structure, corresponding to a contrast in general linear model analyses), these in turn comprising one or more locations (loc structures). The information on the bib level (author, title, ...) is setup automatically from PubMed while the rest of the information is entered manually in a Matlab graphical user interface. On the loc level this includes the 3D stereotactic coordinates in either Talairach or MNI space, the brain area (functional, anatomical or cytoarchitectonic area) and magnitude values such as Z-score and P-value. On the exp level information such as modality, scanner and behavioral domain are recorded with external components (such as face recognition or kinetic boundaries) organized in a directed graph and marked up with Medical Subject Headings (MeSH) where possible. The database is distributed as part of the Brede neuroinformatics toolbox (hendrix.imm.dtu.dk/software/brede/) which also provides the functions to manipulate and analyze the data. The Brede Toolbox is a program package primarily written in Matlab. As of 2006/11, 186 papers with 586 experiments. neuroinformatics, functional neuroimaging, talairach, mni, brain, fmri, neuroimaging, matlab, pet, positron emission tomography, functional magnetic resonance imaging, multichannel electroencephalography, eeg, magnetoencephalography, near infrared spectroscopic imaging, single photon emission computed tomography, mri, coordinate, brain function, brain region, ontology is used by: NIF Data Federation
is related to: Brede Wiki
is related to: Brede Toolbox
is related to: Brede Toolbox
is related to: Brede Wiki
is related to: brainmap.org
is related to: Integrated Manually Extracted Annotation
has parent organization: Technical University of Denmark; Lyngby; Denmark
European Union ;
Project MAPAWAMO QLG3-CT-2000-300161
PMID:19668704
PMID:23666785
THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-00064 SCR_003327 2026-08-04 09:40:53 0
Scientific American Cross-Check
 
Resource Report
Resource Website
Scientific American Cross-Check (RRID:SCR_004266) SA Cross-Check blog, narrative resource, data or information resource Every week, John Horgan takes a puckish, provocative look at breaking science. A former staff writer at Scientific American, he is the author of four books, the most recent of which is The End of War (to be published by McSweeney''s Books January 17, 2012). He currently directs the Center for Science Writings at Stevens Institute of Technology. He lives in New York State''s Hudson Highlands, where he plays ice hockey each winter to hone his cross-checking skills. science is used by: NIF Data Federation
is used by: Integrated Blogs
has parent organization: Scientific American
nlx_144217 SCR_004266 Scientific American - Cross-Check 2026-08-04 09:41:06 0
Integrated Software
 
Resource Report
Resource Website
Integrated Software (RRID:SCR_004745) database, data or information resource A virtual database currently indexing software and tools from the SciCrunch Registry, Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC), Visiome Platform, Cerebellar Platform, Brain Machine Interface Platform, and Genetic Analysis Software (GAS). database, tool, software, integrated is used by: NIF Data Federation
is listed by: Genetic Analysis Software
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is related to: Visiome Platform
is related to: Cerebellar Platform
is related to: Brain Machine Interface Platform
has parent organization: Integrated
Data are licensed by their respective owners, Use and distribution is subject to the Terms of Use by the original resource nlx_75188 https://legacy.neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-10 http://neuinfo.org/nif/nifgwt.html?query=nlx_75188, https://www.neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nlx_75188-1, https://neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-10 SCR_004745 NIF Integrated Software, NIF Integrated Software View, NIF Software, Integrated Software View 2026-08-04 09:41:13 0
SciCrunch Registry
 
Resource Report
Resource Website
1+ mentions
SciCrunch Registry (RRID:SCR_005400) database, data or information resource Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current. RIN, Resource Information Network, nih initiative, interactive portal, rrid, RRID Community Authority is used by: NIF Data Federation
is used by: Aging Portal
is used by: Resource Identification Portal
is used by: Integrated Datasets
recommends: Resource Identification Portal
is recommended by: Resource Identification Portal
is listed by: FORCE11
is listed by: Resource Information Network
is related to: NIF Web Services
is related to: bioDBcore
is related to: NeuroLex
is related to: Integrated Manually Extracted Annotation
is related to: FAIR Data Informatics Laboratory
has parent organization: Neuroscience Information Framework
has parent organization: NeuroLex
NIDA ;
Department of Health and Human Services HHSN271200577531C
PMID:22434839 Free, Freely available nlx_144509 https://scicrunch.org/scicrunch/data/source/nlx_144509-1/search, https://scicrunch.org/browse/dashboard, https://scicrunch.org/scicrunch/Resources/search?q=* https://scicrunch.org/scicrunch/about/sources/nlx_144509-1, http://neuinfo.org/nif/nifgwt.html?tab=registry, https://neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nlx_144509-1, https://neuinfo.org/mynif/search.php?q=*&t=registry SCR_005400 NIF Registry, The SciCrunch Registry, SC Registry, SciCrunch Registry, SciCrunch Resource Registry 2026-08-04 09:41:21 8
ScienceBlogs: Life Science
 
Resource Report
Resource Website
ScienceBlogs: Life Science (RRID:SCR_005158) Sb Life Science blog, narrative resource, data or information resource ScienceBlogs posts about Life Science. life science is used by: NIF Data Federation
is used by: Integrated Blogs
has parent organization: ScienceBlogs
nlx_144203 SCR_005158 ScienceBlogs - Life Science 2026-08-04 09:41:18 0
Scientific American Guest Blog
 
Resource Report
Resource Website
Scientific American Guest Blog (RRID:SCR_005152) SA Guest Blog blog, narrative resource, data or information resource The editors of Scientific American regularly encounter perspectives on science and technology that we believe our readers would find thought-provoking, fascinating, debatable and challenging. The guest blog is a forum for such opinions. The views expressed belong to the author and are not necessarily shared by Scientific American. perspective, science, technology is used by: NIF Data Federation
is used by: Integrated Blogs
has parent organization: Scientific American
nlx_144202 SCR_005152 Scientific American - Guest Blog 2026-08-04 09:41:18 0
Neuroskeptic
 
Resource Report
Resource Website
Neuroskeptic (RRID:SCR_005427) Neuroskeptic blog, narrative resource, data or information resource A blog by a neuroscientist (United Kingdom) that takes a skeptical look at his own field, and beyond. neuroscience, neuroscientist, science is used by: NIF Data Federation
is used by: Integrated Blogs
has parent organization: Discover Magazine
nlx_144523 http://neuroskeptic.blogspot.com/ SCR_005427 Neuroskeptic - International Brain of Mystery, Neuroskeptic - A thought experiment gone horribly wrong, Neuroskeptic - 5HT2B or not 2B? 2026-08-04 09:41:22 0
Integrated Blogs
 
Resource Report
Resource Website
Integrated Blogs (RRID:SCR_005386) Integrated Blogs, Integrated Blog blog, narrative resource, database, data or information resource A virtual database created by the Neuroscience Information Framework currently indexing Scientific Blog and News resources such as: Nature Network Blogs, Wired Science Blogs, The Guardian: Science, It Takes 30, Scientific American Cross-Check, Scientific American Bering in Mind, Research Blogging, CENtral Science, ScienceBlogs: Medicine and Health, American Guest Blog, Scientific American Observations, LabSpaces, RetractionWatch.com, Wired Science, Genomes Unzipped, PLoS Blogs, Daring Nucleic Adventures - genegeek, H2SO4Hurts - Brian Krueger PhD, and Sciblogs. science, commentary, news, multimedia, blog, integrated, database uses: Nature Network Blogs
uses: Wired Science Blogs
uses: The Guardian: Science
uses: It Takes 30
uses: Scientific American Cross-Check
uses: Scientific American Bering in Mind
uses: Research Blogging
uses: CENtral Science
uses: ScienceBlogs: Medicine and Health
uses: ScienceBlogs: Brain and Behavior
uses: ScienceBlogs: Life Science
uses: Scientific American Guest Blog
uses: Scientific American Observations
uses: LabSpaces
uses: RetractionWatch.com
uses: Wired Science
uses: Genomes Unzipped
uses: PLoS Blogs
uses: Daring Nucleic Adventures - genegeek
uses: Sciblogs
uses: New York Times - Well
uses: Lady Scientist
uses: SciLogs
uses: BioPortfolio
uses: ScienceNOW
uses: QUEST
uses: Discover Magazine
uses: Protocol Online - Your labs reference book
uses: Naturally Selected
uses: Oxford Science Blog
uses: Mind Hacks
uses: Cassandras Tears
uses: PolygenicBlog
uses: Now at NEJM
uses: Neuroskeptic
uses: Inside NIA: A Blog for Researchers
uses: Psychology Corner
uses: Law and Neuroscience
uses: neuropathology blog
uses: Mendelspod
uses: Neurophilosophy
uses: NIF Blog
is used by: NIF Data Federation
is used by: Aging Portal
has parent organization: Integrated
Aging Data are licensed by their respective owners, Use and distribution is subject to the Terms of Use by the original resource nlx_144461 https://legacy.neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-13 http://neuinfo.org/nif/nifgwt.html?query=nlx_144461, https://www.neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nlx_144461-1, https://neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-13 SCR_005386 NIF Integrated News Blogs, Integrated Blogs View, NIF Integrated News View, NIF Integrated News and Blogs, NIF Integrated Blog, NIF Integrated Blogs, Neuroscience Information Framework Integrated News, Neuroscience Information Framework Integrated Blogs, NIF Blogs, NIF News/Blogs, NIF News and Blogs, NIF News, NIF News Blogs, NIF Integrated Blogs View, NIF Integrated News, Integrated Blog View 2026-08-04 09:41:21 0
Scientific American Bering in Mind
 
Resource Report
Resource Website
Scientific American Bering in Mind (RRID:SCR_005208) SA Bering in Mind blog, narrative resource, data or information resource THIS RESOURCE IS NO LONGER IN SERVCE, documented September 2, 2016. Science news and technology updates from Scientific American. science, news, technology is used by: NIF Data Federation
is used by: Integrated Blogs
has parent organization: Scientific American
THIS RESOURCE IS NO LONGER IN SERVICE nlx_144216 SCR_005208 Scientific American - Bering in Mind 2026-08-04 09:41:18 0
Nature Network Blogs
 
Resource Report
Resource Website
Nature Network Blogs (RRID:SCR_005165) Nature Network Blogs blog, narrative resource, data or information resource THIS RESOURCE IS NO LONGER IN SERVICE.Documented on February 25,2022.NOTE:Blogs hosted on Nature Network have now moved to new homes in the Nature Publishing Group network of blogs. We''''ve made these changes so that our bloggers can take advantage of improvements in blogging technology, and so that we can offer a better service to our colleagues and those who choose to blog with us. We are no longer hosting blogs on Nature Network itself. Nature Network Blogs are blogs posted by members of Nature Network, the professional networking website for scientists around the world. All features on Nature Network are completely free. All you need to do is create a profile. science is used by: NIF Data Federation
is used by: Integrated Blogs
is related to: SciLogs
is related to: nature.com blogs
has parent organization: Nature Network
THIS RESOURCE IS NO LONGER IN SERVICE nlx_144195 SCR_005165 2026-08-04 09:41:18 0
SciLogs
 
Resource Report
Resource Website
SciLogs (RRID:SCR_005221) SciLogs blog, narrative resource, data or information resource The SciLogs combine the strengths of both science culture and the medium blog. They provide scientists and lay people with the opportunity to interact in interdisciplinary discussions about science in all its facets: research, applications, ethics, values, politics etc. Good Science is transparent and provides us with new knowledge about the world and ourselves. As an important part of our culture and society, science is never isolated. Informing about new results and recent developments as well as the dialogue with the public are characteristics of good science. Good blogs are personalized, authentic and active. Oftentimes, they provide unique perspectives. Blog posts are serious invitations for dialogue, readers are potential partners, invited to comment and ask the bloggers questions. The SciLogs are not a closed community. Every user is invited to comment, and new bloggers are welcome, too. Please submit your blog or blog idea to [email protected] - and we will check if we fit together. science, research, application, ethics, values, politics is used by: NIF Data Federation
is used by: Integrated Blogs
is related to: Nature Network Blogs
nlx_144225 SCR_005221 SciLogs - The daily storyline of science, SciLogs.eu 2026-08-04 09:41:19 0
New York Times - Well
 
Resource Report
Resource Website
1+ mentions
New York Times - Well (RRID:SCR_005220) Well blog, narrative resource, data or information resource The New York Times Well is a blog by Tara Parker-Pope on the latest medical research and societal trends affecting your health. Healthy living doesn''t happen at the doctor''s office. The road to better health is paved with the small decisions we make every day. It''s about the choices we make when we buy groceries, drive our cars and hang out with our kids. Join columnist Tara Parker-Pope as she sifts through medical research and expert opinions for practical advice to help readers take control of their health and live well every day. health, well-being, medical research, societal trend, medicine, research is used by: NIF Data Federation
is used by: Integrated Blogs
For personal, Noncommercial use. Content is protected by copyright. nlx_144224 SCR_005220 NY Times Well Blog, New York Times - Well Blog, New York Times Well, NY Times Well, Well Blog 2026-08-04 09:41:18 1
Oxford Science Blog
 
Resource Report
Resource Website
Oxford Science Blog (RRID:SCR_005218) OxSciBlog blog, narrative resource, data or information resource Read the latest science news and views from Oxford University in the Oxford Science Blog. The blog gives you the inside track on science at Oxford University: the projects, the people and what''s happening behind the scenes. Curated by Pete Wilton, science writer and OU Press Officer. science is used by: NIF Data Federation
is used by: Integrated Blogs
has parent organization: University of Oxford; Oxford; United Kingdom
nlx_144231 SCR_005218 University of Oxford - Science blog, University of Oxford Science Blog 2026-08-04 09:41:19 0
PubMed Health
 
Resource Report
Resource Website
1+ mentions
PubMed Health (RRID:SCR_000512) PubMed Health database, data or information resource THIS RESOURCE IS NO LONGER IN SERVICE.Documented on September 9, 2022. A consumer health database that provides up-to-date information on diseases, conditions, injuries, drugs, supplements, treatment options, and healthy living, with a special focus on comparative effectiveness research from institutions around the world. PubMed Health includes * consumer guides summarizing comparative effectiveness research * fact sheets on diseases and conditions * information on drugs and supplements * encyclopedic overviews of health topics * links to external Web sites PubMed Health has a special focus on comparative effectiveness research, in particular that research which evaluates the available evidence of the benefits and harms of different treatment options for different groups of people. In Comparative Effectiveness Research, experts often synthesize the evidence from dozens, or even hundreds, of individual studies. health, disease, condition, injury, drug, supplement, treatment, healthy living, comparative effectiveness, research is used by: NIF Data Federation
is related to: Integrated Disease
has parent organization: NCBI
THIS RESOURCE IS NO LONGER IN SERVICE nlx_32805 SCR_000512 Pub Med Health 2026-08-04 09:40:09 6
BAMS Nested Regions
 
Resource Report
Resource Website
1+ mentions
BAMS Nested Regions (RRID:SCR_000238) BAMS Nested Regions database, data or information resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 7th, 2019. BAMS is an online resource for information about neural circuitry. The BAMS Nested Regions view focuses on the major brain regions and their relationships. neural circuitry, brain region, brain is used by: NIF Data Federation
has parent organization: Brain Architecture Management System
NIMH MH61223;
NINDS NS16686;
NINDS/NIMH/NIBIB NS50792-01
THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-10175 SCR_000238 Brain Architecture Management System Nested Regions 2026-08-04 09:40:05 3
CENtral Science
 
Resource Report
Resource Website
1+ mentions
CENtral Science (RRID:SCR_000652) CENtral Science blog, narrative resource, data or information resource Blogs for all things chemistry, hosted by Chemical & Engineering News (C&EN) magazine, where you will find blogs written by both C&EN staff and non-staff contributors on topics ranging from jobs to natural products chemistry to safety to the businesses of chemistry. CENtral Science currently includes the following blogs: * Artful Science: C&EN science writer Sarah Everts peers in to the laboratories that help museums and galleries authenticate, conserve, and restore art and artifacts. * Cleantech Chemistry: C&EN business writer Melody Voith looks at the business and technology strategies of companies that hope to serve the world's need for renewable energy, sustainable agriculture, clean water, and non-polluting manufacturing and transportation, among other cleantech sectors. * IYC 2011: CENtral Science's home for all things IYC 2011. * Just Another Electron Pusher: Contributors Christine Herman and Glenn Ernst profile people who've pursued professions away from the bench. They also write about their own personal quests for satisfying jobs that use their degrees but may not involve running any %$@& columns. * Newscripts: The companion blog to the like-named weekly C&EN column. Written primarily by C&EN science writers Lauren Wolf and Beth Halford, with contributions from the C&EN staff. * Terra Sigillata: Molecular cancer pharmacologist David Kroll writes about natural products, focusing on chemistry and pharmaceutical issues. * The Chemical Notebook: C&EN business writer Alex Tullo shares interesting tidbits from his reporter's notebook. * The Editor's Blog: The companion blog to the weekly print column by editor-in-chief Rudy Baum and deputy editor-in-chief Maureen Rouhi. * The Haystack: C&EN business writer Lisa Jarvis and science writer Carmen Drahl weed through pharma's molecular mountain to pluck out the drug developments worth noting. Also features frequent contributions from SeeArrOh, a Ph.D chemist working in industry. * The Safety Zone: C&EN science writer Jyllian Kemsley and safety consultant Russ Phifer cover chemical safety issues in academic and industrial research labs and in manufacturing. * Transition States: A blog about undergrads, by undergrads. Chiral Jones, a senior working on organic chemistry, and Sidechain Bob, a junior in the field of chemical biology, tell their stories of the graduate school experience. Over time, some blogs will retire and others will be added. Their blog network is intentionally a small one, and bloggers are added on an invitation basis. Proposals or blog suggestions may be submitted. It's not a community without your voice, so please contribute either as a commenter or a blogger. chemistry, science is used by: NIF Data Federation
is used by: Integrated Blogs
THIS RESOURCE IS NO LONGER IN SERVICE nlx_144206 SCR_000652 2026-08-04 09:40:11 1
Wired Science
 
Resource Report
Resource Website
Wired Science (RRID:SCR_000649) Wired Science blog, narrative resource, data or information resource Wired Science covers what's new on the front lines of science, from deep space to DNA sequencing. science, news is used by: NIF Data Federation
is used by: Integrated Blogs
is parent organization of: Wired Science Blogs
THIS RESOURCE IS NO LONGER IN SERVICE nlx_144196 SCR_000649 Wired Science - News for Your Neurons 2026-08-04 09:40:11 0

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