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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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PacBioToCA Resource Report Resource Website 10+ mentions |
PacBioToCA (RRID:SCR_003044) | software resource | A module in the Celera Assembler software package that performs error correction on PacBio long reads by mapping shorter, high accuracy reads onto the long reads. | standalone software | is listed by: OMICtools | PMID:22750884 | Free, Available for download, Freely available | OMICS_05093 | https://rhallpb.github.io/Applications/pacBioToCA.html | SCR_003044 | pacBioToCA (error correction via Celera Assembler) | 2026-08-01 12:02:16 | 13 | ||||||
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R-pbutils Resource Report Resource Website |
R-pbutils (RRID:SCR_002995) | software resource | An R software package providing plotting and convenience functions. | software package, r | is listed by: OMICtools | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_05140 | SCR_002995 | 2026-08-01 12:02:15 | 0 | |||||||||
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Dana-Farber Cancer Institute Resource Report Resource Website 1+ mentions |
Dana-Farber Cancer Institute (RRID:SCR_003040) | DFCI | institution |
Cancer institute that provides expert, compassionate care to children and adults with cancer while advancing the understanding, diagnosis, treatment, cure, and prevention of cancer and related diseases. As an affiliate of Harvard Medical School and a Comprehensive Cancer Center designated by the National Cancer Institute, the Institute also provides training for new generations of physicians and scientists, designs programs that promote public health particularly among high-risk and underserved populations, and disseminates innovative patient therapies and scientific discoveries to their target community across the United States and throughout the world. |
child, adult human, pediatric, young human |
has parent organization: Harvard Medical School; Massachusetts; USA is parent organization of: Spotfinder is parent organization of: TM4 Microarray Software Suite - TIGR MultiExperiment Viewer is parent organization of: Gene Index Project is parent organization of: CistromeMap is parent organization of: BINOCh is parent organization of: Dana Farber Tissue Bank is parent organization of: CistromeFinder is parent organization of: TM4 is parent organization of: WorfDB is parent organization of: Predictive Networks is parent organization of: RamiGO is parent organization of: DFCI Animal Resources Facility is parent organization of: DFCI Biohazard Containment Core Facility is parent organization of: DFCI Biospecimen Repository Core Facility is parent organization of: DFCI Blais Proteomics Center is parent organization of: DFCI Clinical Research Laboratory is parent organization of: DFCI Survey and Data Management Core is parent organization of: DFCI Flow Cytometry Core Facility is parent organization of: DFCI Medical Arts Core Facility is parent organization of: DFCI Microarray Core Facility is parent organization of: Dana-Farber Cancer Institute Molecular Biology Core Facility is parent organization of: DFCI RNA Interference Screening Facility is parent organization of: DFCI Shannon McCormack Advanced Molecular Diagnostics Laboratory is parent organization of: MAnorm is parent organization of: NPS is parent organization of: DFCI Confocal and Light Microscopy Core Facility is parent organization of: DFCI Monoclonal Antibody Core Facility is parent organization of: Dana-Farber Cancer Institute Labs and Facilities is parent organization of: DFCI Center for Cancer Computational Biology is parent organization of: GeneSigDB is parent organization of: MACS is parent organization of: DGAP |
Cancer | NCI ; Jimmy Fund |
Free, Freely available | Crossref funder ID: 100007886, grid.65499.37, Wikidata: Q1159198, ISNI: 0000 0001 2106 9910, nif-0000-30432 | https://ror.org/02jzgtq86 | SCR_003040 | Dana Farber Cancer Institute, Dana-Farber | 2026-08-01 12:02:16 | 6 | ||||
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Northwestern University Feinberg School of Medicine; Illinois; USA Resource Report Resource Website |
Northwestern University Feinberg School of Medicine; Illinois; USA (RRID:SCR_001058) | FSM | university | Medical school of Northwestern University which focuses on research initiatives, clinical affiliates, and global outlook. | University, medical school, med school, northwestern, research, clinical, residency |
is related to: Alzheimers Disease Genetics Consortium has parent organization: Northwestern University; Illinois; USA is parent organization of: Northwestern University Cognitive Neurology and Alzheimers Disease Center is parent organization of: Northwestern University Feinberg School of Medicine Center for Advanced Microscopy and Nikon Imaging Center Core Facility is parent organization of: GuPPy is parent organization of: Northwestern University School of Medicine SBDRC Translating Experimental Skin Testing with Immune Tracing, Informatics, and Technology Core Facility is parent organization of: Northwestern University School of Medicine SBDRC Gene Editing, Transduction and Nanotechnology Core Facility is parent organization of: Northwestern University School of Medicine SBDRC Skin Tissue Engineering and Morphology Core Facility |
nlx_41572 | SCR_001058 | Northwestern University Feinberg School of Medicine, Northwestern University FSM, Northwestern University Medical School | 2026-08-01 12:01:22 | 0 | ||||||||
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Princeton University; New Jersey; USA Resource Report Resource Website 1+ mentions |
Princeton University; New Jersey; USA (RRID:SCR_001059) | university | A private Ivy League research university based in New Jersey that confers undergraduate and graduate degrees in the humanities, social sciences, natural sciences, and engineering. It offers professional degrees in international affairs, engineering and applied science, architecture, and finance | private, ivy league, research, new jersey, undergraduate program resource, graduate program resource |
uses: Bioz is related to: Concavity is related to: Conservation is related to: Microns Explorer is parent organization of: GOLEM An interactive, graphical gene-ontology visualization, navigation, and analysis tool is parent organization of: MouseNET is parent organization of: Human Experimental/FunctionAL MaPper: Providing Functional Maps of the Human Genome is parent organization of: MSG is parent organization of: bioPIXIE is parent organization of: PILGRM is parent organization of: mouseMAP is parent organization of: SMD is parent organization of: Generic GO Term Mapper is parent organization of: Biological General Repository for Interaction Datasets (BioGRID) is parent organization of: Ciliate IES-MDS database is parent organization of: Generic GO Term Finder is parent organization of: New Immigrant Survey is parent organization of: MEFIT is parent organization of: CCAT (Combinatorial Code Analysis Tool) is parent organization of: Princeton University Labs and Facilities is parent organization of: Princeton High Throughput Sequencing and Microarray Facility is parent organization of: Brain Imaging Analysis Kit is parent organization of: Java Treeview is parent organization of: PathwayNet is parent organization of: Flywire.ai is parent organization of: Social LEAP is parent organization of: SLEAP, LEAP and MotionMapper project is parent organization of: MotionMapper is parent organization of: WordNet is parent organization of: MAVEN is parent organization of: Princeton University Chemistry Core Facility is parent organization of: Codex |
nlx_16293 | SCR_001059 | Princeton University | 2026-08-01 12:01:37 | 2 | |||||||||
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University of Illinois College of Medicine; Illinois; USA Resource Report Resource Website |
University of Illinois College of Medicine; Illinois; USA (RRID:SCR_001057) | university | The medical school division of the University of Illinois with four separate campuses. The school focuses on excellence in research, education and clinical work, diversity and innovation, and collaboration. | medicine, university, chicago, illinois, medical school, residency, professional program |
is affiliated with: Big Ten Cancer Research Consortium has parent organization: University of Illinois at Chicago; Illinois; USA is parent organization of: University Andrology Laboratory |
nlx_40705 | SCR_001057 | University of Illinois at Chicago College of Medicine, UIC College of Medicine, University of Illinois at Chicago College of Medicine; Illinois; USA, University of Illinois College of Medicine at Chicago | 2026-08-01 12:01:30 | 0 | |||||||||
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International Essential Tremor Foundation Resource Report Resource Website |
International Essential Tremor Foundation (RRID:SCR_001163) | IETF | institution | The IETF is an international nonprofit organization whose mission is to provide global educational information, services and support to those affected by essential tremor (ET) and to health care providers, while promoting and funding ET research. Services provided by the IETF include mailing or emailing a free information packet about ET upon request, maintaining an up-to-date listing of physicians specializing in ET, and assisting in forming and maintaining ET support groups. In addition, the IETF conducts several free educational events in cities across the United States every year, and an annual awareness campaign that runs in conjunction with the organization's largest fundraising activity, Tulips for Tremors. Every year, the IETF also funds basic research into the cause(s) of ET. Small grants are awarded to established scientists whose primary interest is tremor disorders. The IETF funds this program in the hope that these scientists will collect sufficient published data to help them qualify for future federal funding that will lead to better treatments and a cure. IETF members receive two copies a year of the member magazine, Tremor Talk and three copies of the research newsletter, The Scoop on Tremor. Articles in both publications are written for the non-medically trained person and discuss recent advances in research, coping techniques and topics of general interest to those with ET. Medical and research articles are written by physicians and researchers who work with patients with ET and/or study ET in laboratories. The International Essential Tremor Foundation is based in Lenexa, Kansas. | essential tremor, essential tremor online community, essential tremor organization, tremor, tremor research, tremor research funding | Crossref funder ID: 100008447, ISNI: 0000 0004 5903 8599, nif-0000-11649, grid.480535.f | https://ror.org/005vegy94 | http://essentialtremor.xportcms9.com/Home | SCR_001163 | 2026-08-01 12:01:41 | 0 | ||||||||
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Transposon Insertion Finder Resource Report Resource Website 1+ mentions |
Transposon Insertion Finder (RRID:SCR_001159) | TIF | software resource | A search program to detect insertions of transposable element from short reads of next generation sequencer. | perl, unix/linux | is listed by: OMICtools | PMID:24629057 | Free, Available for download, Freely available | OMICS_03508 | SCR_001159 | Transposon Insertion Finder | 2026-08-01 12:01:40 | 1 | ||||||
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Medical College of Wisconsin; Wisconsin; USA Resource Report Resource Website |
Medical College of Wisconsin; Wisconsin; USA (RRID:SCR_001077) | MCW | university | Private and freestanding medical school and graduate school of sciences in Milwaukee, Wisconsin. The institution offers medical degrees as well as masters and PhD-level studies in areas such as biochemistry, cell biology, and community and public health. | private, freestanding, medical, graduate, masters, phd, public health, university |
is related to: Clinical and Translational Science Awards Consortium is parent organization of: Clinical Measurement Ontology is parent organization of: Experimental Conditions Ontology is parent organization of: RatMine is parent organization of: Rat Genome Database (RGD) is parent organization of: Medical College of Wisconsin Cell Biology Neurobiology and Anatomy is parent organization of: National Biomedical Electron Paramagnetic Resonance Center is parent organization of: Cytopathology Foundation is parent organization of: Rat Genome Database: Neurological Disease Portal is parent organization of: Flash Gviewer is parent organization of: Medical College of Wisconsin Mellowes Center for Genomic Sciences and Precision Medicine Core Facility is parent organization of: Medical College of Wisconsin Oxford Instruments Center for Advanced Microscopy Electron Microscopy Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Geospatial, Epidemiology and Outcomes Shared Resource Core Facility is parent organization of: Medical College of Wisconsin Echo Core Shared High-Frequency Ultrasound Imaging Core Facility is parent organization of: Medical College of Wisconsin Tissue Bank is parent organization of: Medical College of Wisconsin Translational Metabolomics Shared Resource Mass Spectrometry Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Structural Biology Shared Resource Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Translational Metabolomics Shared Resource, Redox and Bioenergetics Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Cell Therapy Shared Resource Core Facility is parent organization of: Medical College of Wisconsin Children’s Research Institute CRI Imaging Core Facility is parent organization of: Medical College of Wisconsin Neuroscience Research Center NRC Microscopy Core Facility is parent organization of: Medical College of Wisconsin Comprehensive Rodent Metabolic Phenotyping Core Facility is parent organization of: Medical College of Wisconsin Children's Research Institute Histology Core Facility is parent organization of: Medical College of Wisconsin MCW Engineering Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Stem Cell and Organoid Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Biostatistics Shared Resource Core Facility is parent organization of: Medical College of Wisconsin Children's Research Institute Flow Cytometry Core Facility is parent organization of: Medical College of Wisconsin Center for Microbiome Research Core Facility is parent organization of: Medical College of Wisconsin Cardiovascular Research Center CVRC Microscopy Core Facility is parent organization of: Medical College of Wisconsin Center for Imaging Research Core Facility |
, GRID grid.30760.32, ISNI 0000 0001 2111 8460, nlx_30873, Crossref Funder ID 100008980, Wikidata Q6806307 | https://ror.org/00qqv6244 | SCR_001077 | Medical College of Wisconsin | 2026-08-01 12:01:38 | 0 | |||||||
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North Dakota State University; North Dakota; USA Resource Report Resource Website 1+ mentions |
North Dakota State University; North Dakota; USA (RRID:SCR_001110) | NDSU | university | Public research university in North Dakota, USA. It is a land-grant university that focuses on agriculture and the applied sciences. In addition, it offers undergraduate and graduate degrees in a wide variety of areas including engineering, science and mathematics, health professions, business, and agriculture and food systems studies. | public, research, land grant, agriculture, applied sciences, food systems, health profession |
is parent organization of: NDSU Center for Protease Research is parent organization of: North Dakota State University Labs and Facilities is parent organization of: North Dakota State University School of Pharmacy; North Dakota; USA |
Wikidata:Q2000624, grid.261055.5, nlx_71768, ISNI:0000 0001 2293 4611, Crossref funder ID:100007518 | https://ror.org/05h1bnb22 | SCR_001110 | North Dakota State University | 2026-08-01 12:01:23 | 1 | |||||||
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University of Adelaide; Adelaide; Australia Resource Report Resource Website 1+ mentions |
University of Adelaide; Adelaide; Australia (RRID:SCR_001075) | university | Public research university in Adelaide, South Australia. It is known for its focus on research and emphasis on moving towards commercialization of research. | public, research, university, adelaide, australia, research, commercialization |
is parent organization of: Neural Network Resources is parent organization of: Centre for Automotive Safety Research |
Wikidata:Q15574, nlx_73637, ISNI:0000 0004 1936 7304, Crossref funder ID:501100001786, grid.1010.0 | https://ror.org/00892tw58 | SCR_001075 | 2026-08-01 12:01:31 | 2 | |||||||||
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Athens Research and Technology Resource Report Resource Website 1+ mentions |
Athens Research and Technology (RRID:SCR_001079) | commercial organization | Commercial supplier of bioproducts for studies of inflammation, autoimmune disease, cancer, coronary disease, Alzheimer's Disease and more. These include antibodies, enzymes, coagulation factors, and assay kits. | antibody, protein, biotherapeutics, autoimmune disease, cancer, coronary disease, alzheimers disease | inflammation, autoimmune disease, cancer, coronary disease, Alzheimer's Disease | Wikidata: Q30284050, nlx_152285, grid.423006.3 | https://ror.org/0527dhk70 | SCR_001079 | Athens Research and Technology Inc. | 2026-08-01 12:01:22 | 1 | ||||||||
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Academy Biomedical Company Resource Report Resource Website |
Academy Biomedical Company (RRID:SCR_001108) | commercial organization | Commercial antibody supply company that focuses on providing antibodies for research in cardiovascular and atherosclerosis. | antibody, cardiovascular, athersclerosis, antibody supplier | nlx_152249 | SCR_001108 | Academy Bio-Medical Company, Academy Biomedical Company Inc. | 2026-08-01 12:01:32 | 0 | ||||||||||
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BreakFusion Resource Report Resource Website 1+ mentions |
BreakFusion (RRID:SCR_001102) | BreakFusion | software resource | Software package written in Perl and C++ that provides a computational pipeline for identifying gene fusions from RNA-seq data. | computational pipeline, gene fusions, rna, sequence, data, perl, c++ |
is listed by: OMICtools has parent organization: University of Texas MD Anderson Cancer Center |
PMID:22563071 DOI:10.1093/bioinformatics/bts272 |
Free, Available for download, Freely available | OMICS_01342 | SCR_001102 | 2026-08-01 12:01:32 | 3 | |||||||
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Virginia Commonwealth University School of Medicine; Virginia; USA Resource Report Resource Website |
Virginia Commonwealth University School of Medicine; Virginia; USA (RRID:SCR_001061) | VCU SOM | university | Medical school division of Virginia Commonwealth University. | virginia, medical, medicine, commonwealth, medical school, continuing medical education, residency | has parent organization: Virginia Commonwealth University; Virginia; USA | nlx_64661 | SCR_001061 | VCU School of Medicine | 2026-08-01 12:01:22 | 0 | ||||||||
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U.S. Department of Education Resource Report Resource Website 1+ mentions |
U.S. Department of Education (RRID:SCR_001060) | ED | institution | The United States federal government Department of Education, which oversees policies on federal financial aid for education, collecting data and disseminating research, and working to promote key educational discussions and equal access to education. | education, federal, financial aid, fafsa, government department | is parent organization of: National Institute on Disability and Rehabilitation Research | Available to groups within the United States of America | grid.419881.d, Crossref funder ID: 100000138, Wikidata: Q861556, nlx_143871, ISNI: 0000 0001 2176 2483 | https://ror.org/021adze67 | SCR_001060 | ED.gov, United States Department of Education | 2026-08-01 12:01:30 | 2 | ||||||
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NPEBseq Resource Report Resource Website 1+ mentions |
NPEBseq (RRID:SCR_001014) | NPEBseq | software resource | A method for non-parametric, empirical Bayesian-based analysis of RNA-seq count data. | rna, rna sequence, seq, empirical, Bayesian, nonparametric | is listed by: OMICtools | PMID:23981227 | OMICS_01312 | http://bioinformatics.wistar.upenn.edu/NPEBseq | SCR_001014 | 2026-08-01 12:01:30 | 1 | |||||||
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Hytest Resource Report Resource Website 1+ mentions |
Hytest (RRID:SCR_001133) | commercial organization | A commercial antibody supplier that specializes in high-quality monoclonal antibodies and antigens for the diagnostic industry. | antibody, monoclonal, antigen, diagnostic, research and development, r and d | nlx_152378, grid.417767.4, Wikidata: Q5952196 | https://ror.org/031cpdm45 | SCR_001133 | HyTest Ltd. | 2026-08-01 12:01:23 | 5 | |||||||||
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ASC Resource Report Resource Website 1+ mentions |
ASC (RRID:SCR_001013) | ASC | software resource | Borrows information across sequences to establish prior distribution of sample variation, so that biological variation can be accounted for even when replicates are not available. | sample variation, rna, dna, biology, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: Brown University; Rhode Island; USA |
biotools:sqn, OMICS_01298 | https://bio.tools/sqn | SCR_001013 | 2026-08-01 12:01:36 | 1 | ||||||||
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BioLegend Resource Report Resource Website 5000+ mentions |
BioLegend (RRID:SCR_001134) | commercial organization | Commercial antibody supplier and developer for biomedical research. These products are compatible with use in flow cytometry and mass cytometry, immunoprecipitation and chip, western blotting, immunofluorescence microscopy, and quantitative multiplexing. | commercial, antibody, reagent, biomedical, research, san diego | nlx_152302 | SCR_001134 | 2026-08-01 12:01:40 | 6617 |
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