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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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University of Chicago Digestive Diseases Research Core Center Tissue Engineering and Cell Models Core Resource Report Resource Website 1+ mentions |
University of Chicago Digestive Diseases Research Core Center Tissue Engineering and Cell Models Core (RRID:SCR_015604) | TECM | material resource, biomaterial supply resource | Core that provides services such as a repository for intestinal cell lines, Tissue Engineering Models, experimental materials, and supplies for digestive disease research. | TECM, tissue engineering, cell models |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Chicago Digestive Diseases Research Core Center is organization facet of: University of Chicago Digestive Diseases Research Core Center |
digestive disease | NIDDK P30 DK042086 | Available to the research community | SCR_015604 | 2026-08-13 09:29:24 | 1 | |||||||
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Alien-hunter Resource Report Resource Website 1+ mentions |
Alien-hunter (RRID:SCR_015967) | software resource, standalone software, software application | Software for the prediction of putative Horizontal Gene Transfer (HGT) events with the implementation of Interpolated Variable Order Motifs (IVOMs). The predictions (embl format) can be automatically loaded into Artemis genome viewer. | Horizontal Gene Transfer, Interpolated Variable Order Motifs, gene, transfer, interpolated, variable, motif, prediction, hgt, ivom |
is listed by: Debian is listed by: OMICtools works with: Artemis: Genome Browser and Annotation Tool |
Wellcome Trust | PMID:16837528 DOI:10.1093/bioinformatics/btl369 |
Free, Available for download | OMICS_08280 | https://sources.debian.org/src/alien-hunter/, https://sources.debian.org/src/alien-hunter/ | SCR_015967 | 2026-08-13 09:29:33 | 6 | ||||||
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TDTPy Resource Report Resource Website 1+ mentions |
TDTPy (RRID:SCR_014520) | software resource, systems interoperability software, software application | Software for interfacing with Tucker-Davis System 3 hardware. It is a Python wrapper around Tucker-Davis Technologies ActiveX library. Along with standard operations, the software can conduct type conversions between analog and digital units, handle robust errors, and has a remote procedure call server that allows multiple processes and/or programs to communicate with the hardware across the same connection. | python, tucker davis system, systems interoperability software, interface, hardware | DOI:10.5281/zenodo.17651 | Open source, Available for download | https://github.com/LABSN/tdtpy/tree/v0.7.1 | SCR_014520 | tdtpy | 2026-08-13 09:29:03 | 2 | ||||||||
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Trinity Biobank Resource Report Resource Website 1+ mentions |
Trinity Biobank (RRID:SCR_013279) | Trinity Biobank | material resource, biomaterial supply resource | The Trinity Biobank was established in 2005 to serve the needs of researchers in the area of genetic epidemiology, population genetics and pharmacogenomics. Its services are available to researchers not only in Trinity College but to other institutions at home and abroad. We provide an automated DNA extraction service purifying large volumes blood (up to 10mL whole blood) and tissue DNA for archival and other purposes. In addition it makes available purified DNA and associated GWAS data from 2000 healthy donors for research use. A key requirement for reliable downstream use of DNA is purity and strand size. The quality of DNA in blood and tissue deteriorates upon storage without purification even at -80 degrees C. We ensure rapid turnaround of biological samples through automated extraction using the Qiagen Autopure system based on optimized ''salting out'' chemistry. The purified DNA sample may then be stored safely at -20 degrees C without deterioration thus freeing up valuable -80 degree C freezer space and the associated capital and maintenance cost as well as security and lab space provision. Automated DNA extraction is particularly suitable for high-throughput sample processing called for in epidemiological studies or simply for clearing sample inventory backlogs. The Trinity Biobank distributes control DNA to researchers as part of its remit to enhance the level of research activity and to synergize molecular medicine research nationally and internationally. The buffy coat collection has been made possible with the cooperation of the Irish Blood Transfusion Service (IBTS). An important requirement to access the collection is that the use of the samples relates only to ethically-approved research and to specifically-nominated research projects. The DNA collection consists of high quality human genomic DNA. Each of the available 2,000 samples is from a single individual and each sample comes with the age and gender data of the donor. The buffy coat sample is derived from the total white cell compliment (50mL buffy coat) of a blood donation (c 400mL). We will endeavor to fulfill samples number requests based on age and gender as best as possible. This collection has also been genotyped using the Affymetrix Genome-Wide Human SNP Array 6.0, featuring 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation (CNV). The DNA comes available as a 100ng/uL in 100uL of TE Buffer, ie in 10ug amounts in a separate screw-cap ampoule. The ampoules are shipped in 100-tube boxes (Sarstedt). Corresponding plasma (ACD) is also available on request. Genotype data is supplied in PLINK binary PED files format (http://pngu.mgh.harvard.edu/~purcell/plink/ ). | dna, blood, tissue, buffy coat, cell, packed cell, cultured cell, buccal cell, whole blood, bodily fluid, fresh, frozen, healthy, normal, genetic epidemiology, population genetics, pharmacogenomics, gene, genetics, genome-wide association study, genome-wide association study data, genotype, dna extraction, non-mammalian, bacteria, gram-positive bacteria, gram-negative bacteria |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Trinity College Dublin; Dublin; Ireland has parent organization: St. James Hospital; Dublin; Ireland |
Healthy, Normal | Public: Its services are available to researchers not only in Trinity College but to other institutions at home and abroad. The Trinity Biobank distributes control DNA to researchers as part of its remit to enhance the level of research activity and to synergize molecular medicine research nationally and internationally. It makes available purified DNA and associated GWAS data from 2000 healthy donors for research use. | nlx_25068 | http://www.tcd.ie/IMM/research_biobank.php | SCR_013279 | 2026-08-13 09:29:04 | 3 | ||||||
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LEfSe Resource Report Resource Website 5000+ mentions |
LEfSe (RRID:SCR_014609) | software resource, algorithm resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Algorithm for high-dimensional biomarker discovery and explanation that identifies genes, pathways, or taxa characterizing the differences between two or more biological conditions. The algorithm identifies features that are statistically different among biological classes, then performs additional tests to assess whether these differences are consistent with respect to expected biological behavior. Statistical significance and biological relevance are emphasized., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | microbiome, algorithm, biomarker, genomic feature, web application |
is listed by: Human Microbiome Project is listed by: Debian is listed by: OMICtools |
DOI:10.1186/gb-2011-12-6-r60 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_07818 | https://sources.debian.org/src/lefse/ | SCR_014609 | LDA Effect Size | 2026-08-13 09:29:04 | 7242 | ||||||
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GenomeSpace Resource Report Resource Website 10+ mentions |
GenomeSpace (RRID:SCR_014967) | software resource, systems interoperability software, software application | Interoperability framework which supports integrative genomics analysis via access to various bioinformatics tools. Rather than performing analyses itself, GenomeSpace acts as a hub for data from supported bioinformatics tools and reformats data and results when necessary. | systems interoperability software, framework, interoperability, bioinformatics, genomics, integrative genomics, genome analysis, cloud |
has parent organization: Broad Institute has parent organization: Stanford University; Stanford; California has parent organization: University of California at San Diego; California; USA has parent organization: Pennsylvania State University has parent organization: University of California at Santa Cruz; California; USA |
Amazon Web Services ; NHGRI P01 HG005062; NHGRI HG007517 |
PMID:26780094 | Open source | SCR_014967 | 2026-08-13 09:29:09 | 11 | ||||||||
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Primer Express Resource Report Resource Website 1000+ mentions |
Primer Express (RRID:SCR_014326) | software resource, standalone software, software application | Software that allows users to manually or automatically design custom primers and probes for gene quantitation and allelic discrimination (SNP) real-time PCR applications. It supports assays based on TaqMan and SYBR Green I dye chemistries. | primer, probe, design, gene quantitation, allelic discrimination, real time pcr | is listed by: SoftCite | Pay for product, Specifically made for ThermoFisher Scientific RT-PCR systems | SCR_014326 | 2026-08-13 09:29:10 | 4805 | ||||||||||
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OpenBehavior Resource Report Resource Website 1+ mentions |
OpenBehavior (RRID:SCR_015938) | OB | software resource, software repository | Repository of open source tools for behavioral neuroscience research. OpenBehavior features hardware (tools, devices, apparatuses), as well as software for data acquisition and analysis and for the investigation of animal behavior and cognition. Dedicated to accelerating research through promotion of collaboration and open source projects. | software, data, hardware, animal, behavior, cognition, cognitive, analysis, processing |
lists: Feeding Experimentation Device project lists: Bpod lists: SLEAP, LEAP and MotionMapper project lists: Social LEAP lists: MotionMapper lists: Behavioral Segmentation of Open-field in DeepLabCut project lists: DeepBehavior project lists: BonZeb project lists: D-Track project lists: Online Animal Tracker project lists: Locomouse project lists: openEyeTrack project lists: DeepPoseKit project lists: DeepFly3D project lists: neurotic project lists: Rodent Arena Tracker project lists: Open Source Whisking Video Database portal lists: Simple Behavior Analysis project lists: OpenMonkeyStudio project lists: FaceSync project lists: Online Animal Tracker lists: DeepBehavior lists: BonZeb lists: Behavioral Segmentation of Open-field in DeepLabCut lists: FaceSync lists: LocoMouse lists: DeepPoseKit lists: openEyeTrack lists: D-Track lists: Simple Behavior Analysis lists: DeepFly3D lists: Open Source Whisking Video Database lists: neurotic lists: Low Cost Open Source Eye Tracking project lists: Stytra project lists: Calcium ActiVity Explorer project lists: idtracker.ai project lists: Live Mouse Tracker project lists: ToxTrac project lists: Picamera project lists: EthoScopes project lists: Worm Behavior Platform project lists: KineMouse Wheel project lists: Mousecam project lists: M-Track project lists: ezTrack project lists: FaceMap project lists: Head-Fixed Setup for Combined Behavior, Electrophysiology, and Optogenetics project lists: ZebraTrack project lists: LocoWhisk project lists: EthoWatcher project lists: Skinner Box project lists: Behavioral Observation Research Interactive Software project lists: Pyper project lists: Automated Rodent Tracker project lists: LinCoM project lists: Bonsai project lists: Quantifying Animal Movement from Pre-recorded Videos project lists: Platform for Acoustic STArtle project lists: Joystick project lists: 3DTracker project lists: AutoPilot project lists: PiDose project lists: DeepSqueak project lists: Rigbox project lists: Catalepsy Bar project lists: Dual port Lick Detector project lists: Pathfinder project lists: Actifield project lists: Rodent Activity Detector project lists: flyPAD project lists: Automated Home Cage Rodent Two bottle Choice Test project lists: MedParse project lists: Voluntary Access Static Incapacitance Chamber project lists: Laubach Lab GitHub Repository project lists: BPM Biosignals project lists: Automated mouse homecage two bottle choice test project lists: Mousetrap project lists: Autoreward2 project lists: Optimouse project lists: Hao Chen Lab Repository project lists: AutonoMouse project lists: Spike Forest project lists: Closed Loop System project lists: ArduiPod Box project lists: Oculomatic Eye Tracking project lists: Ultrasonic Vocalizations Detector project lists: Attys project lists: Calcium Imaging data Analysis project lists: Feldman Lab Lickometer project lists: MNE Scan project lists: Open Source platform for Sensory Tasks project lists: Scintillate project lists: Pypreclin project lists: Wave Surfer project lists: An open source motorized swivel for in vivo neural and behavioral recordings project lists: Toolboxes for Spike and LFP Analysis project lists: BrainGlobe project lists: UCLA Miniscope project lists: Cerebro Wireless Optogenetic System project lists: Home Cage Automated Skilled Reaching Apparatus project lists: Open-tES project lists: Capactive Touch Sensor project lists: CapTouch project lists: Two Armed Bandit Task project lists: Novel Gustometer for Human Taste Research project lists: OpenVape project lists: Calcium ActiVity Explorer lists: Pi Virtual Reality System project lists: BonVision project lists: FinchScope project lists: Mousecam lists: ezTrack lists: DIY-NAMIC project lists: Precision Syringe Pump Controller project lists: idtracker.ai lists: Stytra lists: EthoScopes lists: Worm Behavior Platform lists: Ardbark project lists: FaceMap lists: M-Track lists: ToxTrac lists: Pyper lists: Low Cost Open Source Eye Tracking lists: Automated Rodent Tracker lists: Live Mouse Tracker analysis lists: LinCoM lists: Skinner Box lists: 3DTracker lists: Pathfinder lists: Behavioral Observation Research Interactive Software lists: MNE Scan lists: Quantifying Animal Movement from Pre-recorded Videos lists: Rigbox lists: Platform for Acoustic STArtle lists: DeepSqueak lists: Oculomatic lists: Wave Surfer lists: EthoWatcher lists: MedParse lists: Bonsai lists: Scintillate lists: AutoPilot lists: Spike Forest lists: flyPAD lists: Optimouse lists: Calcium Imaging data Analysis lists: BonVision lists: Dual Port Lick Detector lists: Pypreclin lists: ACRoBaT lists: Visual stimulator with customizable light spectra lists: ToneBox lists: 3DOC lists: MouseBytes lists: Touchscreen Cognition lists: FreemoVR project lists: Modular Automated Platform for Large Scale Experiments project lists: OpenFeeder lists: SnackClock lists: SignalBuddy lists: ArControl project lists: Airtrack lists: Teensy-Based Interface project lists: Autonomous Training of a Forelimb Motor Task project lists: Ratcave project lists: DIY Rodent Running Disk lists: Moving Wall Box lists: Operant Box for Auditory Tasks project lists: Camera Control project lists: FlyPi lists: CerebraLux lists: Automated Home-Cage Functional Imaging project lists: Pearce Lab Syringe Pump project lists: Craniobot project lists: PhotometryBox lists: Pulse Pal project lists: NINscope lists: Nose Poke Device lists: pyControl project lists: OpenMV project lists: Rodent Operant Bucket project lists: Tetroplater lists: OpenSpritzer lists: Argus lists: NeRD lists: PRiED lists: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project lists: MouseMove project lists: Eco-HAB lists: Homecage Task Training and Mesoscale Imaging project lists: Microwave based Homecage Motion Detector project lists: CHEndoscope lists: Robotic Flower System for Bee Behavior project lists: TRIO Platform lists: A Head Mounted Multi Camera System for Freely Moving Mice project lists: Ratcave lists: 4 Port Nose Poke lists: An Opensource lickometer and microstructure analysis program lists: Automated Classification of Self-grooming in Mice project lists: FreemoVR lists: ArControl lists: Visual Discrimination with an iPad lists: Teensy-Based Interface lists: Operant Box for Auditory Tasks lists: Autonomous Training of a Forelimb Motor Task lists: 3D Printed Headcap and Microdrive lists: poke device arduino lists: MouseBytes lists: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology lists: Rodent Operant Bucket lists: Camera Control lists: linear actuator lists: Modular Automated Platform for Large Scale Experiments lists: pyControl lists: Argus lists: NINscope software lists: OpenMV lists: MouseMove lists: chendoscope lists: craniobot lists: Pulse Pal lists: Automated Home-Cage Functional Imaging lists: AutoHeadFix lists: SpikeGadgets lists: Open Ephys lists: MRI-stereoscope project lists: AutomaticSleepScoringTool lists: Pi-based Remote Acquisition Technology for Motion Capture project lists: Pi-based Remote Acquisition Technology for Motion Capture lists: Brainrender lists: TetrODrive lists: COMPASS lists: Cellpose lists: OORTT lists: DBscorer lists: GazeMetrics lists: AutoStereota lists: FlyBrainLab lists: pyOS-5 project lists: Pyneal lists: pyOS-5 lists: Atlas Based Analysis lists: VocalMat lists: DABEST lists: Raspberry Pi based auditory stimulus generator lists: Pain Assessment at Withdrawal Speeds lists: Florida research open source synchronization tool lists: Permuco lists: LED Matrix Stimuli lists: Mouse Action Recognition System lists: Behavior Ensemble and Neural Trajectory Observatory lists: Neonatal Stereotaxic Mouse Adaptor lists: MARS Developer lists: EZcalcium lists: MRI Compatible Microdrive lists: GuPPy lists: DeepEthogram lists: Pycro Manager lists: DeepBhvTracking lists: TweetyNet lists: OpenPose lists: TRex lists: SIPEC lists: Closed Loop Automated Reaching Apparatus lists: Timed pressure control hardware and software for delivery of air mediated distensions in animal models lists: CellExplorer lists: DLStream lists: SipperViz lists: Variational Embedding of Animal Motion lists: SHARCQ lists: PavCA project lists: GoFish Ajuwon etal 2022 lists: LED Zappelin’ lists: Minian lists: Modular LED Displays project lists: OpenSync lists: USVCAM lists: Histological E data Registration in rodent Brain Spaces lists: Pi USB Cam project lists: 3D Printed Superfusion Chamber lists: pyPhotometry lists: Rtrack lists: ColonyTrack lists: Anipose lists: LiftPose3D lists: DANNCE lists: DeepLabCut Project lists: ACTman lists: Raspberry Pi Grating lists: Falcon lists: OpBox lists: Mouse Behavioral Analysis Toolbox lists: Pynapple lists: Wheel Running Activity acQuisition lists: CaT-z lists: M3 Platform lists: Automated 2 Photon Imaging Compatible Platform for Assessing Working Memory lists: Rasberry rat lists: RodentJoystick lists: tmilltracker lists: 3D Printed Multi Pump System lists: BehaviorDEPOT lists: Open Face Homecage Running Wheel lists: RatHeadphones lists: RatInABox lists: LabNet lists: JAX Animal Behavior System lists: AnimalTA lists: Mousebytes lists: Lick Instance Quantifier Home cage Device lists: B-CALM lists: Freibox lists: commutator lists: Customized Guide Cannulas lists: BrainWAVE lists: Brainways lists: LFP Monitoring lists: PyMouseTracks lists: Lightning Pose lists: Customizable Multielectrode Array lists: Live Mouse Tracker Toolkit Analysis lists: HFOApp lists: Synaptic Vesicles Detection lists: Pipette Finding CNN lists: 3DP Gustometer lists: SEB3R lists: Lickometer Box lists: Custom-fitting-of-implants lists: Markerless Mouse Tracking for Social Experiments lists: FARESHARE lists: HERBs lists: E-Scope lists: PyBehave lists: ReachOut lists: One-rat Turnstile lists: TD_Drive lists: Holeboard lists: SaLSa lists: ghostipy lists: DREAM implant lists: HSSM lists: High-Precision Optical Fiber-Based Lickometer lists: NC4gate lists: ArUco lists: STPoseNet lists: Bell Jar lists: Implant for Reliable Diaphragm EMG Recordings in Awake, Behaving Rats lists: Active Commutator |
Public | SCR_015938 | 2026-08-13 09:29:31 | 5 | |||||||||
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Boruta Resource Report Resource Website 10+ mentions |
Boruta (RRID:SCR_016234) | software resource, algorithm resource | Algorithm that performs feature selection. It finds relevant features by comparing original attributes' importance with importance achievable at random, estimated using their permuted copies (shadows). | feature, selection, algorithm, wrapper, estimation, shadow, copy | uses: R Project for Statistical Computing | Free, Available to download | https://mbq.github.io/Boruta/ | SCR_016234 | Boruta algorithm, Boruta: Wrapper Algorithm for All Relevant Feature Selection | 2026-08-13 09:29:24 | 11 | ||||||||
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HKL-2000 Resource Report Resource Website 100+ mentions |
HKL-2000 (RRID:SCR_015547) | 3-d visualization software, data processing software, software resource, software application | Software package for structural determination and other functions in the field of structural biology. Its programs can perform strategy and simulation, 3-D processing, mosaicity refinement during processing, variable spot size, easy change of the space group, report generation, and other functions. | structural biology, structure determination process, simulation, 3d processing, mosaicity, strategy, | is listed by: SoftCite | PMID:27754618 | Commercially available, License required, Runs on Linux, Runs on Mac OS | www.hkl-xray.com | SCR_015547 | 2026-08-13 09:29:26 | 215 | ||||||||
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COMPOSITELD Resource Report Resource Website 1+ mentions |
COMPOSITELD (RRID:SCR_013132) | software resource, software application | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 24,2023. Software application to compute composite measures of linkage disequilibrium, their variances and covariances, and statistical tests, for all pairs of alleles from two loci when linkage phase is unkown. An extension of Weir and Cockerham (1989) to apply to multi-allelic loci. (entry from Genetic Analysis Software) | gene, genetic, genomic, r/s-plus | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_009099, nlx_154265, nlx_154192 | SCR_013132 | R/COMPOSITELD | 2026-08-13 09:29:03 | 6 | ||||||||
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MC DataTool Resource Report Resource Website 10+ mentions |
MC DataTool (RRID:SCR_014580) | software resource, systems interoperability software, software application | An add-on tool used to export data retrieved with the MC_Rack program. This software is used to convert MC_Rack data files into other file formats. | systems interoperability software, add-on tool, mc rack, mc_rack, file format, data file, data conversion, export data, export | Open source | SCR_014580 | MC_DataTool | 2026-08-13 09:29:03 | 17 | ||||||||||
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PhenVar Resource Report Resource Website 1+ mentions |
PhenVar (RRID:SCR_015515) | web application, software resource, source code | Software tool used to generate a list of PubMed IDs to query and generate associations between publications. It utilizes a local SQLite cache in a configurable location to keep a local copy of relevant SRIDs, PMIDs, and the Abstract sections for the PMIDs. | pmid query, publication association |
uses: Python Programming Language has parent organization: University of Colorado; Colorado; USA is hosted by: GitHub |
Open source, Available for download | https://phenvar.colorado.edu/ | SCR_015515 | 2026-08-13 09:29:23 | 1 | |||||||||
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EZ-C1 FreeViewer Resource Report Resource Website 1+ mentions |
EZ-C1 FreeViewer (RRID:SCR_014277) | software resource, standalone software, software application | Software for browsing the image data acquired by Nikon C1 and a Nikon C1si system. | image data, standalone software, browse | Free, Registration needed for download | SCR_014277 | 2026-08-13 09:29:02 | 6 | |||||||||||
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Duke Human Heart Repository Resource Report Resource Website 50+ mentions |
Duke Human Heart Repository (RRID:SCR_013980) | material resource, biomaterial supply resource | A biomaterial supply resource which collects and disseminates human heart tissue. Samples include both failing and non-failing hearts, RNA/DNA analysis, tissue staining and immunofluorescence samples.The tissue that has been flash frozen and stored at -80˚C is acquired from distinct regions of the heart such as the LV free wall, septum, and valve leaflets. Individual sample sizes are typically 100-300mg for flash frozen tissues. The DHHR also serves as a resource for assay development, target identification, and sponsored research, capable of isolating cardiomyocytes from hearts and using them for in-vitro assays such as calcium handling, enzyme activity, signalling pathways and other biochemical research activities | biomaterial supply resource, human heart, human heart tissue, cardiovascular, tissue, tissue sample |
lists: American Heart Association lists: ASPET lists: Duke Biobank lists: International Society for Biological and Environmental Repositories lists: American Society for Cell Biology is listed by: Connected Researchers is related to: Connected Researchers has parent organization: Duke University; North Carolina; USA |
Free, Available to the research community | SCR_013980 | 2026-08-13 09:29:07 | 89 | ||||||||||
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Kitware Resource Report Resource Website 10+ mentions |
Kitware (RRID:SCR_013989) | service resource, software resource, software repository | A software repository which provides open source software and technology for visualization, computer vision, medical imaging, data publishing, and quality software process solutions. Kitware also provides services such as creating customized applications for clients, porting their open-source tools to specialized computing platforms, and supporting their open-source software tools with documentation, professional consulting services, and software training. | software repository, open source, visualization, computer vision, medical imaging, data publishing, quality software process solutions |
is listed by: Connected Researchers is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: VTK CISG Registration Toolkit is related to: Connected Researchers is parent organization of: Midas Platform is parent organization of: ParaView is parent organization of: VolView is parent organization of: VTK |
PASCAL network of excellence ; Max-Planck Society ; Fraunhofer Society |
Open source | SCR_013989 | 2026-08-13 09:28:56 | 12 | |||||||||
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machine learning open source software Resource Report Resource Website 10+ mentions |
machine learning open source software (RRID:SCR_013990) | mloss | software resource, software repository | A software repository which provides open source software for machine learning. Software entries include information such as author, license, data format, and programming language. The ultimate goal of mloss.org is to create a comprehensive open source machine learning environment where open source machine learning software can compete with comercial closed source solutions. | software repository, machine learning, machine learning software |
is listed by: Connected Researchers is related to: Connected Researchers |
Open source, The community can contribute to this resource | SCR_013990 | mloss.org | 2026-08-13 09:28:56 | 14 | ||||||||
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National Cancer Institute Resource Report Resource Website 100+ mentions |
National Cancer Institute (RRID:SCR_011176) | NCI | government granting agency, institution | Federal government agency for cancer research and training established in 1937. National Cancer Program is responsibility of NCI to coordinate, conduct and support research, training, health information dissemination with respect to cause, diagnosis, prevention, and treatment of cancer, rehabilitation from cancer, and continuing care of cancer patients and families of cancer patients. Supports construction of laboratories, clinics, and related facilities necessary for cancer research through award of grants. | institute, federal, government, agency, cancer, research, training, program, health, diagnosis, prevention, treatment, clinic, laboratory, grant |
is parent organization of: Cancer Gene Index is parent organization of: Biometric Research Branch: ArrayTools is parent organization of: High-Throughput GoMiner is parent organization of: DNAWorks at Helix Systems is parent organization of: Center for Cancer Research: Schiller Laboratory is parent organization of: Retroviral Tagged Cancer Gene Database is parent organization of: CGEMS is parent organization of: National Cancer Institute 3D Structure Database is parent organization of: SNP500Cancer is parent organization of: QPPD - Quantitative PCR Primer Database is parent organization of: NCI Center for Cancer Research Genomics Core Facility is parent organization of: CellMiner is parent organization of: National Cancer Institute Genomics and Pharmacology Core Facility is parent organization of: NCI SEER Cancer Stage Variable Documentation is parent organization of: NCI Division of Cancer Control and Population Sciences SEER-Medicare Comorbidity SAS Macros is parent organization of: NCI Division of Cancer Control and Population Sciences SEER-Medicare Linked Data Resource is parent organization of: NIH Center for Cancer Research Sequencing Core Facility |
https://ror.org/040gcmg81 | , Wikidata Q664846, nlx_inv_1005051, GRID grid.48336.3a ISNI 0000 0004 1936 8075, nlx_inv_1005082, Crossref Funder ID 100000054, SCR_011403 | SCR_011176 | 2026-08-13 09:28:37 | 353 | ||||||||
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SciLite Resource Report Resource Website 1+ mentions |
SciLite (RRID:SCR_015015) | software resource, text-mining software, software application | Text mining tool from Europe PMC that allows biological terms or concepts to be highlighted for readers on full text articles. These terms and concepts are identified by text mining algorithms, which are developed by a variety of text mining groups. However, it is up to the reader to control which selection of highlighted concepts they see. Once concepts of interest have been identified within the text, they are formatted according to the W3C Web Annotation Data Model and stored in a triple store via the EMBL-EBI RDF Platform. As a reader views an article in a web browser, any annotations in the triple store associated with the article are made available in a menu alongside the article. | text mining, text annotation, scientific annotation | Available to the scientific community | SCR_015015 | SciLite Annotations | 2026-08-13 09:29:07 | 7 | ||||||||||
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wMICA Resource Report Resource Website 1+ mentions |
wMICA (RRID:SCR_015490) | software resource, algorithm resource | Weighted implementation of Maximal Information Component Analysis, a co-expression network analysis algorithm for analysis of large interconnected networks and the identification of modules of similarly-acting nodes within the larger network. | network algorithm, network analysis, gene expression network |
has parent organization: University of California at Los Angeles; California; USA is hosted by: GitHub |
PMID:23487572 | Available for download | SCR_015490 | 2026-08-13 09:29:22 | 5 |
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