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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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HighSSR Resource Report Resource Website 1+ mentions |
HighSSR (RRID:SCR_007949) | HighSSR | software resource | Software that predicts microsatellites with Tandem Repeats Finder (TRF). |
is listed by: OMICtools has parent organization: Google Code |
PMID:22954626 | OMICS_00107 | SCR_007949 | highssr - Microsatellites prediction and analysis with next generation sequencing data | 2026-08-01 12:03:42 | 1 | ||||||||
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GenoTan Resource Report Resource Website 1+ mentions |
GenoTan (RRID:SCR_007935) | GenoTan | software resource | A free software tool to identify length variation of microsatellites from short sequence reads. | bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: SourceForge |
PMID:24135263 | GNU General Public License, v3 | biotools:genotan | https://bio.tools/genotan | SCR_007935 | GenoTan - Genotyping of microsatellite loci | 2026-08-01 12:03:25 | 1 | |||||
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RSEG Resource Report Resource Website 10+ mentions |
RSEG (RRID:SCR_007695) | RSEG | software resource | Software package aimed to analyze ChIP-Seq data, especially for identifying genomic regions and their boundaries marked by diffusive histone modification markers, such as H3K36me3 and H3K27me3. |
is listed by: OMICtools has parent organization: University of Southern California; Los Angeles; USA |
PMID:21325299 | Free | OMICS_00459 | SCR_007695 | 2026-08-01 12:03:33 | 14 | ||||||||
|
Congress of Neurological Surgeons Resource Report Resource Website 1+ mentions |
Congress of Neurological Surgeons (RRID:SCR_007993) | institution | A professional organization focused on advancing neurosurgery by providing members with the educational and career development opportunities. They have an annual meeting and offer CME opportunities. The Congress of Neurological Surgeons seeks to improve the quality of healthcare through: * The development of educational programs that convey knowledge, enhance self-directed learning and improve patient outcomes. * Advancing the science of medical education. * Promoting original inquiry and the exchange of clinical and scientific evidence. * Public advocacy for the enhancement of quality, safety and access to neurosurgical care. The Congress of Neurological Surgeons seeks to advance the profession of neurosurgery through: * Refining neurosurgical practice based on evidence. * Promoting volunteerism and leadership development within our specialty. * Development of programs to promote safety, quality and efficiency in practice for domestic and international members. |
is parent organization of: University of Neurosurgery Webinar Series is parent organization of: CNS NeuroWIki is parent organization of: Congress of Neurological Surgeons University of Neurosurgery is parent organization of: University of Neurosurgery Video Theatre |
Crossref funder ID: 100005653, Wikidata: Q5160882, ISNI: 0000 0001 1014 951X, nif-0000-06701, grid.453882.0 | https://ror.org/04ddd7237 | SCR_007993 | CNS | 2026-08-01 12:03:35 | 2 | |||||||||
|
HilbertVis Resource Report Resource Website 1+ mentions |
HilbertVis (RRID:SCR_007862) | HilbertVis | software resource | Software tool that allows to display very long data vectors in a space-efficient manner, allowing the user to visually judge the large scale structure and distribution of features simultaneously with the rough shape and intensity of individual features. | bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: European Bioinformatics Institute |
DOI:10.1093/bioinformatics/btp152 | OMICS_00627, biotools:hilbertvis | https://bio.tools/hilbertvis, https://sources.debian.org/src/r-bioc-hilbertvis/ | SCR_007862 | 2026-08-01 12:03:34 | 4 | |||||||
|
University of Rennes 1; Rennes; France Resource Report Resource Website 1+ mentions |
University of Rennes 1; Rennes; France (RRID:SCR_007649) | Univ-Rennes 1 | university | The University of Rennes 1 is one of the two main universities in the city of Rennes, France. It is under the Academy of Rennes. It specializes in science, technology, law, economy, management and philosophy. |
is related to: MIP-DILI is related to: Empenn is parent organization of: VISAGES Research is parent organization of: GASSST is parent organization of: CoBaltDB |
nlx_31280 | SCR_007649 | Universite de Rennes 1, University of Rennes 1, Université de Rennes 1 | 2026-08-01 12:03:24 | 1 | |||||||||
|
ResearchCrossroads Funding Opportunities Database Resource Report Resource Website |
ResearchCrossroads Funding Opportunities Database (RRID:SCR_007920) | ResearchCrossroads Funding | funding resource | A database of funding opportunities from both public and private funding sources. Search by keyword and the funding opportunities matching your criteria are displayed. Click on the funding title to view the complete record. You may also add opportunities to the ResearchCrossroads database if you have registered. | research funding, research money, database | has parent organization: ResearchCrossroads | SCR_007920 | Research Crossroads Funding | 2026-08-01 12:03:41 | 0 | |||||||||
|
BRIG Resource Report Resource Website 100+ mentions |
BRIG (RRID:SCR_007802) | BRIG | software resource | A cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. | bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: SourceForge |
DOI:10.1186/1471-2164-12-402 | OMICS_00929, biotools:brig | https://bio.tools/brig, https://sources.debian.org/src/brig/ | SCR_007802 | BLAST Ring Image Generator | 2026-08-01 12:03:24 | 497 | ||||||
|
MedGene Resource Report Resource Website 1+ mentions |
MedGene (RRID:SCR_008122) | software resource | An algorithm that generates lists of genes associated with a gene or one or more disorders. The algorithm can be used in high-throughput screening experiments, can create disease-specific micro-arrays, and can sort the results of gene profiling data. Based on the co-citations of all Medline records, MedGene can retrieve the following relationships: 1. A list of human genes associated with a particular human disease in ranking order 2. A list of human genes associated with multiple human diseases in ranking order 3. A list of human diseases associated with a particular human gene in ranking order 4. A list of human genes associated with a particular human gene in ranking order 5. The sorted gene list from other disease related high-throughput experiments, such as micro-array 6. The sorted gene list from other gene related high-throughput experiments, such as micro-array | gene, disease, human order, microarray | has parent organization: Harvard University; Cambridge; United States | nif-0000-20869 | SCR_008122 | MedGene | 2026-08-01 12:03:27 | 4 | |||||||||
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Annotation-Modules Resource Report Resource Website |
Annotation-Modules (RRID:SCR_008025) | Annotation-Modules | software resource | A tool for finding significant combinations of multisource annotations in gene lists. | is listed by: OMICtools | OMICS_00630 | SCR_008025 | 2026-08-01 12:03:25 | 0 | ||||||||||
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University of Southern California; Los Angeles; USA Resource Report Resource Website 1+ mentions |
University of Southern California; Los Angeles; USA (RRID:SCR_008093) | USC | university | American private research university in Los Angeles, California. Founded in 1880, it is the oldest private research university in California. USC has historically educated a large number of the nation's business leaders and professionals. | private, research, university, American |
is related to: Alzheimers Disease Genetics Consortium is related to: Clinical and Translational Science Awards Consortium is related to: The Pancreatic Beta-Cell Consortium is parent organization of: Wavelet Analysis of Image Registration is parent organization of: wANNOVAR is parent organization of: Gene Aging Nexus is parent organization of: Bioscholar is parent organization of: Resource Center for Medical Ultrasonic Transducer Technology is parent organization of: Brainstorm is parent organization of: Biomedical Simulations Resource is parent organization of: Brain Operation Database is parent organization of: Karma is parent organization of: PANTHER is parent organization of: Biomedical Informatics Research Network is parent organization of: MethPipe is parent organization of: SPOT - Biological prioritization after a SNP association study is parent organization of: Bis-SNP is parent organization of: MLML is parent organization of: ENIGMA: Enhancing Neuro Imaging Genetics Through Meta-Analysis is parent organization of: lapdftext is parent organization of: Brain Architecture Management System is parent organization of: BIRN Coordinating Center is parent organization of: University of Southern California Department of Neuroscience is parent organization of: RSEG is parent organization of: University of Southern California Brain Project is parent organization of: Center for Premature Infant Health and Developement is parent organization of: Sub-Volume Thresholding Analysis is parent organization of: jViewbox is parent organization of: MultiPhase-SEG is parent organization of: LONI Java Image I/O Plugins is parent organization of: DualSurfaceMin is parent organization of: Charged Fluid Model for Brain Image Segmentation is parent organization of: CpG Island Searcher is parent organization of: Longitudinal Study of Generations is parent organization of: Biomarker Network is parent organization of: Nihon University Japanese Longitudinal Study of Aging is parent organization of: PhenoExplorer is parent organization of: Piranha is parent organization of: USC Flow Cytometry Core is parent organization of: University of Southern California School of Pharmacy Lentiviral Laboratory Core Facility is parent organization of: University of Southern California School of Pharmacy Graduate Programs is parent organization of: University of Southern California School of Pharmacy Histology Laboratory Core Facility is parent organization of: University of Southern California School of Pharmacy Translational Research Laboratory is parent organization of: University of Southern California Epigenome Center Data Production Facility is parent organization of: USC Stem Cell Core Facility is parent organization of: University of Southern California Labs and Facilities is parent organization of: USC Immune Monitoring Core Facility is parent organization of: USC Cancer Research Informatics Core is parent organization of: University of Southern California Keck School of Medicine; California; USA is parent organization of: muliAlignFree is parent organization of: GPSeq is parent organization of: CEDER is parent organization of: W3C Provenance Incubator Group Wiki is parent organization of: FadE is parent organization of: PerM is parent organization of: Clippers is parent organization of: NIMH Repository and Genomics Resources is parent organization of: CROP is parent organization of: NeuroScholar is parent organization of: GPCR Network is parent organization of: ENIGMA-DTI Pipeline is parent organization of: TomoMiner is parent organization of: MOCA is parent organization of: TopDom is parent organization of: NMF Toolbox is parent organization of: Data Archive BRAIN Initiative is parent organization of: Mouse Connectome Project is parent organization of: MethBase is parent organization of: OntoSoft is parent organization of: riborex is parent organization of: PombeX is parent organization of: University of Southern California CHLA Cellular Imaging Core Facility is parent organization of: University of Southern California CHLA Extracellular Vesicle Core Facility is parent organization of: ReproRehab Research Education Course is parent organization of: Global Alzheimers Association Interaction Network is parent organization of: USC-SIPI Image Database has organization facet: Neurodevelopmental MRI Database |
grid.42505.36, Wikidata:Q4614, ISNI:0000 0001 2156 6853, Crossref funder ID:100006034, nlx_24939 | https://ror.org/03taz7m60 | SCR_008093 | University of Southern California | 2026-08-01 12:03:38 | 3 | |||||||
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University of West Bohemia; Pilsen; Czech Republic Resource Report Resource Website |
University of West Bohemia; Pilsen; Czech Republic (RRID:SCR_008203) | UWB | university | The University of West Bohemia is a university in Pilsen, Czech Republic. It was founded in 1991 and consists of nine faculties. | is parent organization of: EEGbase | nlx_50579 | SCR_008203 | 2026-08-01 12:03:47 | 0 | ||||||||||
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BiQAnalyzer HT Resource Report Resource Website 10+ mentions |
BiQAnalyzer HT (RRID:SCR_008045) | BiQAnalyzer HT | software resource | Software that currently allows to process an amount of bisulfite sequencing reads obtained in one or several bisulfite sequencing experiments. | is listed by: OMICtools | OMICS_00631 | SCR_008045 | 2026-08-01 12:03:26 | 12 | ||||||||||
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University of Science and Technology of China; Hefei; China Resource Report Resource Website |
University of Science and Technology of China; Hefei; China (RRID:SCR_008038) | university | Public research university in Hefei, Anhui, China, under direct leadership of Chinese Academy of Sciences. Member of elite C9 League. Chinese state Class A Double First Class University. | nlx_90285 | http://www5.ustc.edu.cn/en/ | SCR_008038 | 2026-08-01 12:03:44 | 0 | |||||||||||
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University of Western Sydney; New South Wales; Australia Resource Report Resource Website |
University of Western Sydney; New South Wales; Australia (RRID:SCR_008156) | UWS | university | Western Sydney University is one of Australia's leading institutions. Ranked in the top 400 in the world. | is parent organization of: University of Western Sydney Labs and Facilities | nlx_155519 | SCR_008156 | University of Western Sydney | 2026-08-01 12:03:47 | 0 | |||||||||
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lobSTR Resource Report Resource Website 10+ mentions |
lobSTR (RRID:SCR_008030) | lobSTR | software resource | A software tool for profiling Short Tandem Repeats (STRs) from high throughput sequencing data., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: Massachusetts Institute of Technology; Massachusetts; USA; |
PMID:22522390 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00109, biotools:lobstr | https://bio.tools/lobstr | SCR_008030 | lobSTR - Profiling STRs in personal genomes | 2026-08-01 12:03:43 | 47 | |||||
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Institute for Neural Computation Resource Report Resource Website |
Institute for Neural Computation (RRID:SCR_008068) | institution | The Institute for Neural Computation (INC) is an organized research unit of the University of California at San Diego with 44 members representing 14 research disciplines, devoted to the research and development of a new generation of massively parallel computers through a coherent and cohesive plan of research spanning the areas of neuroscience, visual science, cognitive science, artificial intelligence, mathematics, economics and social science, and computer engineering. INC is a leading center in the field of neural computation, initiating joint research projects, providing special facilities for carrying out research, coordinating the training of young investigators, and offering special activities through its Industrial Affiliates Program. The INC also supports training programs for graduate students and postdoctoral fellows in Cognitive Neuroscience (NIH) and Computational Neurobiology (NFS). | economics, artificial intelligence, cognitive neuroscience, cognitive science, computational neurobiology, computer engineering, mathematics, neuroscience, parallel computer, social science, visual science | has parent organization: University of California at San Diego; California; USA | nif-0000-10510 | SCR_008068 | UCSD INC | 2026-08-01 12:03:37 | 0 | |||||||||
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Systems Biology Workbench Resource Report Resource Website |
Systems Biology Workbench (RRID:SCR_008059) | SBW | software resource | An open source framework for systems biology connecting heterogeneous software applications written in diverse programming languages and running on different platforms-to communicate and use each others'' capabilities via a fast binary encoded-message system. It uses a broker-based, distributed, message-passing architecture, supports many languages including Java, C++, Perl & Python, and runs under Linux,OSX & Win32. Many biological modeling and simulation tools are a part of SBW, including JDesigner and Jarnac. | simulation, systems biology, bioinformatics | is listed by: 3DVC | DARPA ; DOE |
nif-0000-10441 | http://www.sys-bio.org/index.htm | SCR_008059 | 2026-08-01 12:03:26 | 0 | |||||||
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University of Sheffield; South Yorkshire; United Kingdom Resource Report Resource Website 1+ mentions |
University of Sheffield; South Yorkshire; United Kingdom (RRID:SCR_008056) | university | Founded in 1905, the University of Sheffield is one of the UK''s leading Russell Group universities with an outstanding record in both teaching and research. |
is affiliated with: OpenMinTeD is parent organization of: ZCre |
Crossref funder ID:501100000858, nlx_151620, ISNI:0000 0004 1936 9262, grid.11835.3e, Wikidata:Q823917 | https://ror.org/05krs5044 | SCR_008056 | University of Sheffield | 2026-08-01 12:03:44 | 6 | |||||||||
|
UCHIME Resource Report Resource Website 1000+ mentions |
UCHIME (RRID:SCR_008057) | UCHIME | software resource | An algorithm for detecting chimeric sequences. |
is listed by: OMICtools is listed by: SoftCite |
OMICS_01115 | SCR_008057 | 2026-08-01 12:03:37 | 1777 |
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